Variant report

Variant nsv1044086
Chromosome Location chr13:49331713-49350131
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:76 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:49331200-49341800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr13:49334000-49336600 Enhancers Fetal Intestine Small intestine
3 chr13:49335000-49335400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
4 chr13:49335000-49335800 Enhancers Fetal Intestine Large intestine
5 chr13:49337000-49337200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
6 chr13:49337600-49338400 Enhancers iPS-15b Cell Line embryonic stem cell
7 chr13:49338000-49338400 Enhancers iPS-18 Cell Line embryonic stem cell
8 chr13:49338200-49338400 Bivalent Enhancer ES-UCSF4 Cell Line embryonic stem cell
9 chr13:49341200-49341400 Enhancers H1 Cell Line embryonic stem cell
10 chr13:49341600-49341800 Weak transcription H1 Cell Line embryonic stem cell
11 chr13:49341800-49342000 ZNF genes & repeats H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
12 chr13:49342800-49343600 Enhancers Dnd41 blood
13 chr13:49343000-49343200 Enhancers Duodenum Smooth Muscle Duodenum
14 chr13:49343000-49343400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
15 chr13:49343000-49343400 Enhancers Primary T helper cells PMA-I stimulated --
16 chr13:49343000-49343600 Enhancers Brain Hippocampus Middle brain
17 chr13:49343000-49343600 Enhancers Stomach Mucosa stomach
18 chr13:49343000-49343800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
19 chr13:49343000-49344400 Enhancers Hela-S3 cervix
20 chr13:49343200-49343400 Enhancers Primary T cells from cord blood blood
21 chr13:49343400-49343800 Enhancers Brain Anterior Caudate brain
22 chr13:49343600-49344000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
23 chr13:49343600-49345800 Weak transcription Dnd41 blood
24 chr13:49343800-49346000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
25 chr13:49344000-49349000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
26 chr13:49344400-49347400 Weak transcription Hela-S3 cervix
27 chr13:49345800-49348000 Enhancers Dnd41 blood
28 chr13:49346000-49346400 Enhancers Breast Myoepithelial Primary Cells Breast
29 chr13:49346000-49346400 Enhancers Right Ventricle heart
30 chr13:49346000-49346800 Enhancers Left Ventricle heart
31 chr13:49346000-49346800 Enhancers Right Atrium heart
32 chr13:49346000-49348400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
33 chr13:49346200-49346600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
34 chr13:49346200-49346800 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
35 chr13:49346200-49346800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
36 chr13:49346200-49346800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
37 chr13:49346200-49346800 Enhancers Fetal Heart heart
38 chr13:49346200-49347600 Enhancers Primary hematopoietic stem cells short term culture blood
39 chr13:49346400-49346600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
40 chr13:49346400-49346800 Enhancers Fetal Lung lung
41 chr13:49346400-49350600 Weak transcription Breast Myoepithelial Primary Cells Breast
42 chr13:49346600-49347600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
43 chr13:49346600-49357200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
44 chr13:49346800-49348800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
45 chr13:49346800-49352200 Weak transcription Left Ventricle heart
46 chr13:49347400-49352000 Enhancers Hela-S3 cervix
47 chr13:49347600-49349200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
48 chr13:49347800-49348400 Enhancers Placenta Placenta
49 chr13:49347800-49352000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
50 chr13:49348400-49350000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin

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