Variant report

Variant	nsv1044282
Chromosome Location	chr10:55186501-55516392
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr10:55361088-55361391	HepG2	liver:	n/a	n/a
2	ARID3A	chr10:55379164-55379197	K562	blood:	n/a	n/a
3	ATF2	chr10:55357030-55358165	H1-hESC	embryonic stem cell:	n/a	n/a
4	ATF2	chr10:55358549-55359145	H1-hESC	embryonic stem cell:	n/a	n/a
5	ATF2	chr10:55236413-55237624	H1-hESC	embryonic stem cell:	n/a	n/a
6	ATF2	chr10:55357496-55358125	H1-hESC	embryonic stem cell:	n/a	n/a
7	ATF2	chr10:55238974-55239521	H1-hESC	embryonic stem cell:	n/a	n/a
8	BACH1	chr10:55410674-55410823	H1-hESC	embryonic stem cell:	n/a	n/a
9	BACH1	chr10:55217223-55217233	H1-hESC	embryonic stem cell:	n/a	n/a
10	BCL11A	chr10:55239117-55239415	H1-hESC	embryonic stem cell:	n/a	chr10:55239353-55239362
11	BCL11A	chr10:55357742-55358035	H1-hESC	embryonic stem cell:	n/a	n/a
12	BCL11A	chr10:55358747-55359028	H1-hESC	embryonic stem cell:	n/a	n/a
13	BCL11A	chr10:55239200-55239377	H1-hESC	embryonic stem cell:	n/a	chr10:55239353-55239362
14	BCL11A	chr10:55358639-55359002	H1-hESC	embryonic stem cell:	n/a	n/a
15	BHLHE40	chr10:55191987-55192023	GM12878	blood:	n/a	n/a
16	BHLHE40	chr10:55190762-55191068	GM12878	blood:	n/a	n/a
17	BRCA1	chr10:55236620-55237424	H1-hESC	embryonic stem cell:	n/a	n/a
18	BRCA1	chr10:55436651-55436653	Hela-S3	cervix:	n/a	n/a
19	BRCA1	chr10:55239096-55239406	H1-hESC	embryonic stem cell:	n/a	n/a
20	CCNT2	chr10:55407553-55407753	K562	blood:	n/a	n/a
21	CEBPB	chr10:55494993-55495303	IMR90	lung:	n/a	n/a
22	CEBPB	chr10:55411770-55412027	HepG2	liver:	n/a	chr10:55411925-55411936
23	CEBPB	chr10:55250346-55250673	IMR90	lung:	n/a	chr10:55250515-55250526 chr10:55250495-55250506
24	CEBPB	chr10:55484526-55484810	A549	lung:	n/a	chr10:55484642-55484651 chr10:55484640-55484651 chr10:55484642-55484653 chr10:55484640-55484653
25	CEBPB	chr10:55440562-55440588	H1-hESC	embryonic stem cell:	n/a	n/a
26	CEBPB	chr10:55316193-55316425	HepG2	liver:	n/a	chr10:55316279-55316290
27	CEBPB	chr10:55411759-55412117	Hela-S3	cervix:	n/a	chr10:55411925-55411936
28	CEBPB	chr10:55440212-55440489	A549	lung:	n/a	chr10:55440348-55440359
29	CEBPB	chr10:55239054-55239539	H1-hESC	embryonic stem cell:	n/a	chr10:55239464-55239475 chr10:55239371-55239383
30	CEBPB	chr10:55250331-55250691	HepG2	liver:	n/a	chr10:55250515-55250526 chr10:55250495-55250506
31	CEBPB	chr10:55312660-55312904	H1-hESC	embryonic stem cell:	n/a	chr10:55312751-55312762 chr10:55312749-55312766
32	CEBPB	chr10:55233744-55234036	HepG2	liver:	n/a	chr10:55233869-55233880
33	CEBPB	chr10:55250388-55250668	H1-hESC	embryonic stem cell:	n/a	chr10:55250515-55250526 chr10:55250495-55250506
34	CEBPB	chr10:55495107-55495314	A549	lung:	n/a	n/a
35	CEBPB	chr10:55250360-55250591	A549	lung:	n/a	chr10:55250515-55250526 chr10:55250495-55250506
36	CEBPB	chr10:55484473-55484797	IMR90	lung:	n/a	chr10:55484642-55484651 chr10:55484640-55484651 chr10:55484642-55484653 chr10:55484640-55484653
37	CEBPB	chr10:55440189-55440480	HepG2	liver:	n/a	chr10:55440348-55440359
38	CEBPB	chr10:55250334-55250666	K562	blood:	n/a	chr10:55250515-55250526 chr10:55250495-55250506
39	CEBPB	chr10:55312611-55312881	IMR90	lung:	n/a	chr10:55312751-55312762 chr10:55312749-55312766
40	CEBPB	chr10:55495099-55495137	K562	blood:	n/a	n/a
41	CEBPB	chr10:55482351-55482593	HepG2	liver:	n/a	chr10:55482450-55482463 chr10:55482451-55482462 chr10:55482452-55482461 chr10:55482452-55482461 chr10:55482450-55482461 chr10:55482452-55482461 chr10:55482450-55482463 chr10:55482452-55482461 chr10:55482450-55482463
42	CEBPB	chr10:55484474-55484818	HepG2	liver:	n/a	chr10:55484642-55484651 chr10:55484640-55484651 chr10:55484642-55484653 chr10:55484640-55484653
43	CEBPB	chr10:55294104-55294156	A549	lung:	n/a	n/a
44	CEBPB	chr10:55312702-55312890	A549	lung:	n/a	chr10:55312751-55312762 chr10:55312749-55312766
45	CEBPB	chr10:55495022-55495339	HepG2	liver:	n/a	n/a
46	CEBPB	chr10:55440217-55440437	IMR90	lung:	n/a	chr10:55440348-55440359
47	CEBPB	chr10:55407097-55407340	H1-hESC	embryonic stem cell:	n/a	n/a
48	CEBPB	chr10:55188572-55188772	HepG2	liver:	n/a	n/a
49	CEBPB	chr10:55361129-55361360	A549	lung:	n/a	n/a
50	CEBPB	chr10:55250389-55250679	Hela-S3	cervix:	n/a	chr10:55250515-55250526 chr10:55250495-55250506

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr10:55419927-55419977	HAEpiC	amniotic membrane:	n/a
2	chr10:55259527-55259577	GM19239	blood:	n/a
3	chr10:55393450-55393500	GM12892	blood:	n/a
4	chr10:55393450-55393500	HMEC	breast:	n/a
5	chr10:55393450-55393500	SK-N-MC	brain:	n/a
6	chr10:55419927-55419977	ECC-1	luminal epithelium:	n/a
7	chr10:55393450-55393500	IMR90	lung:	fetal
8	chr10:55259527-55259577	HPAEpiC	pulmonary alveolar:	n/a
9	chr10:55357618-55357668	ECC-1	luminal epithelium:	n/a
10	chr10:55419714-55419764	HCM	heart:	n/a
11	chr10:55357618-55357668	NT2-D1	testis:	n/a
12	chr10:55357618-55357668	SK-N-MC	brain:	n/a
13	chr10:55357618-55357668	IMR90	lung:	fetal
14	chr10:55259527-55259577	HEEpiC	esophagus:	n/a
15	chr10:55259527-55259577	A549	lung:	n/a
16	chr10:55419927-55419977	HRCEpiC	kidney:	n/a
17	chr10:55419714-55419764	MCF-7	breast:	n/a
18	chr10:55419714-55419764	HMEC	breast:	n/a
19	chr10:55357618-55357668	BE2_C	brain:	n/a
20	chr10:55393450-55393500	BJ	skin:	n/a
21	chr10:55419927-55419977	RPTEC	kidney:	n/a
22	chr10:55259527-55259577	AG04449	skin:	fetal
23	chr10:55259527-55259577	MCF-7	breast:	n/a
24	chr10:55419714-55419764	AG09319	gingival:	n/a
25	chr10:55393450-55393500	AG04449	skin:	fetal
26	chr10:55419714-55419764	Caco-2	colon:	n/a
27	chr10:55419714-55419764	PANC-1	pancreas:	n/a
28	chr10:55393450-55393500	AG09309	skin:	n/a
29	chr10:55419927-55419977	Hela-S3	cervix:	n/a
30	chr10:55393450-55393500	SK-N-SH	brain:	n/a
31	chr10:55259527-55259577	SK-N-MC	brain:	n/a
32	chr10:55419927-55419977	HCF	heart:	n/a
33	chr10:55357618-55357668	Caco-2	colon:	n/a
34	chr10:55419927-55419977	Jurkat	blood:	n/a
35	chr10:55419714-55419764	HRE	kidney:	n/a
36	chr10:55259527-55259577	NH-A	brain:	n/a
37	chr10:55357618-55357668	HRE	kidney:	n/a
38	chr10:55419927-55419977	U87	brain:	n/a
39	chr10:55419714-55419764	GM19239	blood:	n/a
40	chr10:55393450-55393500	GM19239	blood:	n/a
41	chr10:55357618-55357668	AG09309	skin:	n/a
42	chr10:55419927-55419977	K562	blood:	n/a
43	chr10:55419927-55419977	NHBE	bronchial:	n/a
44	chr10:55419714-55419764	SAEC	small airway:	n/a
45	chr10:55393450-55393500	LNCaP	prostate:	n/a
46	chr10:55419927-55419977	HCPEpiC	choroid plexus:	n/a
47	chr10:55419714-55419764	T-47D	breast:	n/a
48	chr10:55393450-55393500	HepG2	liver:	n/a
49	chr10:55419927-55419977	IMR90	lung:	fetal
50	chr10:55419714-55419764	NB4	blood:	n/a

No.	Distal block	Cell Line	Cell type
1	chr10:55278002..55279503-chr7:30548599..30550148,2	MCF-7	breast:
2	chr10:55303514..55305516-chr10:55305569..55307810,2	K562	blood:
3	chr10:55481740..55482260-chr20:52673713..52674214,2	MCF-7	breast:
4	chr10:55466040..55468835-chr10:55471879..55474110,2	K562	blood:
5	chr10:55405153..55407581-chr5:63345532..63348450,2	MCF-7	breast:
6	chr10:55271750..55273969-chr10:55282270..55285131,2	MCF-7	breast:
7	chr10:55228435..55230987-chr10:55235490..55236993,2	K562	blood:
8	chr10:55466040..55468835-chr10:55471879..55474110,2	K562	blood:
9	chr10:55313361..55315052-chr10:55318156..55320737,2	K562	blood:
10	chr10:55303514..55305516-chr10:55305569..55307810,2	K562	blood:
11	chr10:55313361..55315052-chr10:55318156..55320737,2	K562	blood:
12	chr10:55298474..55301304-chr10:55304357..55306392,2	MCF-7	breast:
13	chr10:55298474..55301304-chr10:55304357..55306392,2	MCF-7	breast:
14	chr10:55228435..55230987-chr10:55235490..55236993,2	K562	blood:
15	chr10:55360709..55361787-chr10:55606233..55607054,5	MCF-7	breast:
16	chr10:55271750..55273969-chr10:55282270..55285131,2	MCF-7	breast:
17	chr10:55360883..55361625-chr10:55568215..55569121,2	MCF-7	breast:

Variant related genes	Relation type
RNA5SP318	TF binding region
RNA5SP318	CpG island

Extended variants
information (count: 10640 )
Associated
traits (count: 75 )

Variant overlapped rSNPs/rCNVs (count:10640 , 50 per page) page: 1 2 3 4 5 6 7 ... 213

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs370075471	chr10:55186634-55186635	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs113063140	chr10:55186701-55186702	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs377352397	chr10:55186788-55186789	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs12411335	chr10:55186807-55186808	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
5	rs75529084	chr10:55186821-55186822	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs371172329	chr10:55186835-55186836	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs201660271	chr10:55186836-55186837	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs138654044	chr10:55186838-55186839	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs1198124	chr10:55186857-55186858	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
10	rs535262846	chr10:55186904-55186905	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs558475954	chr10:55186919-55186920	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs566084726	chr10:55186940-55186941	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs536594856	chr10:55186969-55186970	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs192281787	chr10:55186972-55186973	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs17619942	chr10:55186973-55186974	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
16	rs571850538	chr10:55186983-55186984	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs112770795	chr10:55186995-55186996	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs552677565	chr10:55187012-55187013	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs150789812	chr10:55187043-55187044	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs367600895	chr10:55187051-55187052	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs544845522	chr10:55187061-55187062	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs534465629	chr10:55187065-55187066	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs564835367	chr10:55187076-55187077	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs575498735	chr10:55187221-55187222	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs79651622	chr10:55187240-55187241	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs563720251	chr10:55187244-55187245	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs529343036	chr10:55187264-55187265	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs17619990	chr10:55187269-55187270	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
29	rs559922220	chr10:55187271-55187272	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs528691832	chr10:55187293-55187294	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs139038589	chr10:55187297-55187298	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs17620027	chr10:55187299-55187300	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
33	rs149866993	chr10:55187325-55187326	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs550278171	chr10:55187339-55187340	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs34160090	chr10:55187340-55187341	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs540006815	chr10:55187367-55187368	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs567231381	chr10:55187461-55187462	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs559851554	chr10:55187535-55187536	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs528959041	chr10:55187538-55187539	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs183904149	chr10:55187551-55187552	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs376989228	chr10:55187578-55187579	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs113020790	chr10:55187584-55187585	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs12569755	chr10:55187595-55187596	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs374339725	chr10:55187613-55187614	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs544519478	chr10:55187620-55187621	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs554089389	chr10:55187646-55187647	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs1198123	chr10:55187651-55187652	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
48	rs568824059	chr10:55187659-55187660	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs77694566	chr10:55187668-55187669	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs111619372	chr10:55187669-55187670	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:75)

Disease	PMID	Source
Pancreatic endocrine tumor	17639061	CNVD
Gastric cancer	17908304	CNVD
Chordoma	21602918	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Medulloblastoma	21979893	CNVD
Melanoma	18172304	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Ewing''s sarcoma	17952124	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Acute lymphoblastic leukemia	20724749	CNVD
Autism	22495311	CNVD
Esophageal cancer	21851588	CNVD
Prostate cancer	18632612	CNVD
Autism	18414403	CNVD
Cockayne syndrome	18421352	CNVD
Glioblastoma	16823260	CNVD
Medulloblastoma	16968546	CNVD
Neuroblastoma	17533364	CNVD
T-cell lymphomas	19863542	CNVD
Testicular germ cell tumor	18059402	CNVD
Squamous cell cancer	21044232	CNVD
Glioma	21971842	CNVD
Cancer	21637783	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Colorectal cancer	20709793	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Liposarcoma	21253554	CNVD
Oligodendroglial tumors	17285580	CNVD
Obesity	21956041	CNVD
Developmental delay	21948486	CNVD
Dysmorphic features	21948486	CNVD
Epilepsy	21948486	CNVD
Intellectual disability	21948486	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Lung cancer	18438408	CNVD
Breast cancer	21364760	CNVD
small cell lung cancer	20016488	CNVD
Colorectal cancer	16272173	CNVD
Metanephric adenoma	20802469	CNVD
Autism	20841430	CNVD
Mental retardation	17124404	CNVD
Epilepsy	20923578	CNVD
Prostate cancer	16573809	CNVD
Schizophrenia	19329560	CNVD
Heart failure	18772530	CNVD
Heart failure	18854381	CNVD
Hyperglycemia	19060297	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Myelofibrosis	22110671	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Glioblastoma multiforme	22286061	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Usher syndrome	20538994	CNVD
Glioblastoma multiforme	17002787	CNVD
Colorectal cancer	16774939	CNVD
Autism	20858243	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Melanoma	17363583	CNVD
Breast cancer	22522925	CNVD
Usher type I cohort	17277737	CNVD
Usher type I cohort	21436283	CNVD
Leukemia	21357790	CNVD
Medulloblastoma	22832581	CNVD
Pancreatic cancer	17952125	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD

Chromatin state (count:706 , 50 per page) page: 1 2 3 4 5 6 7 ... 15

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:55182400-55200400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
2	chr10:55184600-55200600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr10:55186000-55206600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
4	chr10:55188400-55189400	Enhancers	Liver	Liver
5	chr10:55188800-55189000	Enhancers	iPS-18 Cell Line	embryonic stem cell
6	chr10:55189200-55190200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
7	chr10:55190000-55190400	Enhancers	iPS-20b Cell Line	embryonic stem cell
8	chr10:55190000-55190800	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
9	chr10:55190000-55190800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
10	chr10:55190200-55190600	Enhancers	iPS-18 Cell Line	embryonic stem cell
11	chr10:55190400-55190600	Enhancers	HUES64 Cell Line	embryonic stem cell
12	chr10:55190400-55194000	Weak transcription	iPS-20b Cell Line	embryonic stem cell
13	chr10:55190600-55198600	Weak transcription	iPS-18 Cell Line	embryonic stem cell
14	chr10:55190600-55199200	Weak transcription	HUES64 Cell Line	embryonic stem cell
15	chr10:55191200-55191400	Enhancers	HUES48 Cell Line	embryonic stem cell
16	chr10:55191400-55192000	Weak transcription	HUES48 Cell Line	embryonic stem cell
17	chr10:55192000-55192200	Enhancers	HUES48 Cell Line	embryonic stem cell
18	chr10:55192200-55194600	Weak transcription	HUES48 Cell Line	embryonic stem cell
19	chr10:55194000-55194200	Enhancers	iPS-20b Cell Line	embryonic stem cell
20	chr10:55194200-55194800	Weak transcription	iPS-20b Cell Line	embryonic stem cell
21	chr10:55194600-55195200	Enhancers	HUES48 Cell Line	embryonic stem cell
22	chr10:55194800-55195000	Enhancers	H9 Cell Line	embryonic stem cell
23	chr10:55194800-55195000	Enhancers	iPS-20b Cell Line	embryonic stem cell
24	chr10:55195200-55198800	Weak transcription	HUES48 Cell Line	embryonic stem cell
25	chr10:55198600-55199400	Enhancers	iPS-18 Cell Line	embryonic stem cell
26	chr10:55198600-55199400	Enhancers	Fetal Kidney	kidney
27	chr10:55198800-55199200	Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
28	chr10:55198800-55199200	Enhancers	Placenta	Placenta
29	chr10:55198800-55199200	Active TSS	Fetal Stomach	stomach
30	chr10:55198800-55199400	Enhancers	HUES48 Cell Line	embryonic stem cell
31	chr10:55198800-55199400	Enhancers	Fetal Heart	heart
32	chr10:55199200-55199400	Enhancers	H9 Cell Line	embryonic stem cell
33	chr10:55199200-55199600	Enhancers	HUES64 Cell Line	embryonic stem cell
34	chr10:55199400-55200600	Weak transcription	HUES48 Cell Line	embryonic stem cell
35	chr10:55199400-55206800	Weak transcription	H9 Cell Line	embryonic stem cell
36	chr10:55200400-55200800	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
37	chr10:55200600-55200800	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
38	chr10:55200600-55200800	Enhancers	HUES48 Cell Line	embryonic stem cell
39	chr10:55200800-55201200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
40	chr10:55200800-55206200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
41	chr10:55201200-55201400	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
42	chr10:55201400-55206600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
43	chr10:55205400-55205800	Weak transcription	HUES6 Cell Line	embryonic stem cell
44	chr10:55205800-55208000	ZNF genes & repeats	HUES6 Cell Line	embryonic stem cell
45	chr10:55205800-55208200	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
46	chr10:55206000-55206600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
47	chr10:55206200-55208000	ZNF genes & repeats	ES-UCSF4 Cell Line	embryonic stem cell
48	chr10:55206600-55207800	ZNF genes & repeats	H1 Cell Line	embryonic stem cell
49	chr10:55206600-55207800	ZNF genes & repeats	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
50	chr10:55206600-55207800	ZNF genes & repeats	iPS-15b Cell Line	embryonic stem cell

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links