Variant report

Variant nsv1045447
Chromosome Location chr12:1959333-1993612
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:107 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:1955200-1960000 Weak transcription Fetal Brain Male brain
2 chr12:1958200-1962800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
3 chr12:1960000-1960600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
4 chr12:1960000-1961000 Enhancers Osteobl bone
5 chr12:1960000-1962000 Enhancers Fetal Brain Male brain
6 chr12:1960200-1960800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr12:1960200-1960800 Enhancers Muscle Satellite Cultured Cells --
8 chr12:1960600-1960800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
9 chr12:1960600-1961000 Enhancers Dnd41 blood
10 chr12:1960800-1961600 Enhancers Primary hematopoietic stem cells short term culture blood
11 chr12:1960800-1963800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
12 chr12:1963400-1964400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
13 chr12:1963800-1965600 ZNF genes & repeats Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
14 chr12:1964000-1965200 ZNF genes & repeats Brain Cingulate Gyrus brain
15 chr12:1964200-1964800 Enhancers Primary T helper 17 cells PMA-I stimulated --
16 chr12:1964200-1965200 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
17 chr12:1964400-1964800 ZNF genes & repeats iPS DF 6.9 Cell Line embryonic stem cell
18 chr12:1964400-1965000 ZNF genes & repeats Aorta Aorta
19 chr12:1964400-1965200 ZNF genes & repeats Adipose Nuclei Adipose
20 chr12:1964400-1965200 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
21 chr12:1964600-1965800 ZNF genes & repeats Stomach Smooth Muscle stomach
22 chr12:1964800-1965200 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
23 chr12:1965600-1966400 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
24 chr12:1968600-1968800 Bivalent Enhancer HepG2 liver
25 chr12:1969000-1969200 Bivalent Enhancer Osteobl bone
26 chr12:1969400-1969600 Bivalent Enhancer Lung lung
27 chr12:1972800-1973400 Weak transcription Lung lung
28 chr12:1973600-1974200 ZNF genes & repeats Spleen Spleen
29 chr12:1973800-1974000 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
30 chr12:1973800-1974000 Bivalent Enhancer Fetal Intestine Large intestine
31 chr12:1973800-1974400 Bivalent Enhancer Fetal Muscle Trunk muscle
32 chr12:1973800-1974600 Bivalent Enhancer Fetal Stomach stomach
33 chr12:1973800-1974800 ZNF genes & repeats Lung lung
34 chr12:1974000-1974200 Flanking Bivalent TSS/Enh Foreskin Keratinocyte Primary Cells skin03 Skin
35 chr12:1974000-1974200 Bivalent Enhancer Fetal Lung lung
36 chr12:1974000-1974200 Bivalent Enhancer Right Ventricle heart
37 chr12:1974000-1974400 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
38 chr12:1974000-1974400 Active TSS Duodenum Mucosa Duodenum
39 chr12:1974200-1974400 Bivalent/Poised TSS Foreskin Keratinocyte Primary Cells skin03 Skin
40 chr12:1974200-1974400 Bivalent Enhancer Left Ventricle heart
41 chr12:1974200-1974600 Active TSS H1 Derived Mesenchymal Stem Cells ES cell derived
42 chr12:1974200-1974600 ZNF genes & repeats Pancreas Pancrea
43 chr12:1974200-1974800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
44 chr12:1974200-1974800 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
45 chr12:1974200-1974800 Enhancers Gastric stomach
46 chr12:1974400-1979200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
47 chr12:1974600-1974800 Bivalent Enhancer Foreskin Fibroblast Primary Cells skin02 Skin
48 chr12:1974800-1978400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
49 chr12:1978400-1978800 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
50 chr12:1978800-1980200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived

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