Variant report

Variant	nsv1045455
Chromosome Location	chr15:41536624-41620534
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1620)
CpG islands
(count:1098)
Chromatin interactive
region (count:69)
LncRNA
region (count:22)
Mature miRNA
region (count: 0)
miRNA target
sites (count:1)

(count:1620 , 50 per page) page: 1 2 3 4 5 6 7 ... 33

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr15:41575773-41576295	K562	blood:	n/a	n/a
2	ARID3A	chr15:41573543-41573804	HepG2	liver:	n/a	n/a
3	ARID3A	chr15:41550815-41551066	HepG2	liver:	n/a	n/a
4	ARID3A	chr15:41575798-41576331	HepG2	liver:	n/a	n/a
5	ARID3A	chr15:41576787-41577058	K562	blood:	n/a	n/a
6	ARID3A	chr15:41548453-41549358	HepG2	liver:	n/a	n/a
7	ARID3A	chr15:41552145-41552508	HepG2	liver:	n/a	n/a
8	ARID3A	chr15:41572221-41572573	HepG2	liver:	n/a	n/a
9	ATF1	chr15:41575878-41576267	K562	blood:	n/a	n/a
10	ATF1	chr15:41569103-41569423	K562	blood:	n/a	n/a
11	ATF1	chr15:41551453-41551670	K562	blood:	n/a	n/a
12	ATF2	chr15:41575724-41576102	GM12878	blood:	n/a	n/a
13	ATF2	chr15:41575726-41576237	H1-hESC	embryonic stem cell:	n/a	n/a
14	ATF2	chr15:41575698-41576341	GM12878	blood:	n/a	n/a
15	ATF2	chr15:41583297-41583653	GM12878	blood:	n/a	n/a
16	ATF3	chr15:41548542-41549346	A549	lung:	n/a	n/a
17	ATF3	chr15:41548594-41549315	A549	lung:	n/a	n/a
18	ATF3	chr15:41575831-41575981	GM12878	blood:	n/a	n/a
19	BACH1	chr15:41556026-41556569	H1-hESC	embryonic stem cell:	n/a	n/a
20	BACH1	chr15:41576903-41577138	K562	blood:	n/a	n/a
21	BATF	chr15:41596310-41596699	GM12878	blood:	n/a	n/a
22	BATF	chr15:41601710-41602013	GM12878	blood:	n/a	chr15:41601877-41601888
23	BATF	chr15:41596330-41596708	GM12878	blood:	n/a	n/a
24	BATF	chr15:41601659-41602027	GM12878	blood:	n/a	chr15:41601877-41601888
25	BCL3	chr15:41541946-41542420	A549	lung:	n/a	n/a
26	BCL3	chr15:41548561-41549208	A549	lung:	n/a	n/a
27	BCL3	chr15:41575802-41576159	A549	lung:	n/a	n/a
28	BCL3	chr15:41548418-41549463	A549	lung:	n/a	n/a
29	BCLAF1	chr15:41575694-41576546	GM12878	blood:	n/a	chr15:41576147-41576160 chr15:41576152-41576161
30	BCLAF1	chr15:41583211-41583762	GM12878	blood:	n/a	n/a
31	BHLHE40	chr15:41552037-41552353	HepG2	liver:	n/a	n/a
32	BHLHE40	chr15:41576038-41576410	HepG2	liver:	n/a	chr15:41576147-41576163 chr15:41576150-41576166 chr15:41576148-41576164
33	BHLHE40	chr15:41552022-41552329	HepG2	liver:	n/a	n/a
34	BHLHE40	chr15:41552035-41552350	HepG2	liver:	n/a	n/a
35	BHLHE40	chr15:41583274-41583628	GM12878	blood:	n/a	n/a
36	BHLHE40	chr15:41575786-41576434	K562	blood:	n/a	chr15:41576147-41576163 chr15:41576150-41576166 chr15:41576148-41576164
37	BHLHE40	chr15:41575780-41577136	GM12878	blood:	n/a	chr15:41576147-41576163 chr15:41576150-41576166 chr15:41576148-41576164
38	BRCA1	chr15:41551153-41551603	Hela-S3	cervix:	n/a	n/a
39	BRCA1	chr15:41576684-41577149	Hela-S3	cervix:	n/a	n/a
40	BRCA1	chr15:41575823-41576326	Hela-S3	cervix:	n/a	n/a
41	BRCA1	chr15:41577125-41577185	H1-hESC	embryonic stem cell:	n/a	n/a
42	BRCA1	chr15:41575303-41575341	Hela-S3	cervix:	n/a	n/a
43	CBX3	chr15:41575699-41576478	K562	blood:	n/a	n/a
44	CCNT2	chr15:41576054-41576601	K562	blood:	n/a	chr15:41576157-41576166
45	CEBPB	chr15:41579094-41579448	HepG2	liver:	n/a	chr15:41579255-41579266
46	CEBPB	chr15:41578966-41579451	K562	blood:	n/a	chr15:41579255-41579266
47	CEBPB	chr15:41583602-41583758	Hela-S3	cervix:	n/a	chr15:41583732-41583743
48	CEBPB	chr15:41556167-41556610	H1-hESC	embryonic stem cell:	n/a	chr15:41556402-41556415 chr15:41556402-41556413
49	CEBPB	chr15:41551182-41551631	A549	lung:	n/a	n/a
50	CEBPB	chr15:41573536-41573966	Hela-S3	cervix:	n/a	n/a

(count:1098 , 50 per page) page: 1 2 3 4 5 6 7 ... 22

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr15:41572490-41572540	AG09309	skin:	n/a
2	chr15:41576060-41576110	HRPEpiC	eye:	n/a
3	chr15:41576747-41576797	NB4	blood:	n/a
4	chr15:41575924-41575974	SAEC	small airway:	n/a
5	chr15:41576376-41576426	CMK	blood:	n/a
6	chr15:41579955-41580005	HEK293	kidney:	embryo
7	chr15:41576747-41576797	SAEC	small airway:	n/a
8	chr15:41575950-41576000	BE2_C	brain:	n/a
9	chr15:41576837-41576887	NB4	blood:	n/a
10	chr15:41575421-41575471	MCF10A-Er-Src	breast:	n/a
11	chr15:41575950-41576000	HCM	heart:	n/a
12	chr15:41576837-41576887	NH-A	brain:	n/a
13	chr15:41576221-41576271	MCF10A-Er-Src	breast:	n/a
14	chr15:41575924-41575974	AG09319	gingival:	n/a
15	chr15:41579955-41580005	HMEC	breast:	n/a
16	chr15:41579955-41580005	HRE	kidney:	n/a
17	chr15:41579955-41580005	SAEC	small airway:	n/a
18	chr15:41576115-41576165	NHDF-neo	bronchial:	n/a
19	chr15:41576376-41576426	HIPEpiC	eye:	n/a
20	chr15:41576747-41576797	HRPEpiC	eye:	n/a
21	chr15:41572490-41572540	NB4	blood:	n/a
22	chr15:41576060-41576110	HCPEpiC	choroid plexus:	n/a
23	chr15:41575924-41575974	Hela-S3	cervix:	n/a
24	chr15:41555798-41555848	AG04449	skin:	fetal
25	chr15:41576747-41576797	NT2-D1	testis:	n/a
26	chr15:41555798-41555848	NHBE	bronchial:	n/a
27	chr15:41575924-41575974	GM12878	blood:	n/a
28	chr15:41576115-41576165	HEK293	kidney:	embryo
29	chr15:41579955-41580005	HCT-116	colon:	n/a
30	chr15:41576691-41576741	HRCEpiC	kidney:	n/a
31	chr15:41576747-41576797	PFSK-1	brain:	n/a
32	chr15:41576212-41576262	LNCaP	prostate:	n/a
33	chr15:41555798-41555848	MCF10A-Er-Src	breast:	n/a
34	chr15:41576519-41576569	HUVEC	blood vessel:	n/a
35	chr15:41576837-41576887	AG09309	skin:	n/a
36	chr15:41576691-41576741	PrEC	prostate:	n/a
37	chr15:41555798-41555848	RPTEC	kidney:	n/a
38	chr15:41576747-41576797	SKMC	muscle:	n/a
39	chr15:41555798-41555848	HCPEpiC	choroid plexus:	n/a
40	chr15:41555798-41555848	A549	lung:	n/a
41	chr15:41576221-41576271	A549	lung:	n/a
42	chr15:41576519-41576569	HRPEpiC	eye:	n/a
43	chr15:41576747-41576797	GM12892	blood:	n/a
44	chr15:41576100-41576150	HCT-116	colon:	n/a
45	chr15:41576376-41576426	GM06990	blood:	n/a
46	chr15:41575421-41575471	BJ	skin:	n/a
47	chr15:41576100-41576150	HAEpiC	amniotic membrane:	n/a
48	chr15:41576837-41576887	HNPCEpiC	eye:	n/a
49	chr15:41576221-41576271	SK-N-MC	brain:	n/a
50	chr15:41576115-41576165	MCF10A-Er-Src	breast:	n/a

(count:69 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr15:41535934..41538302-chr15:41541101..41542958,2	MCF-7	breast:
2	chr15:41593982..41596712-chr15:41614556..41616645,2	K562	blood:
3	chr1:154154878..154155675-chr15:41576129..41576663,2	Hela-S3	cervix:
4	chr15:41601722..41604409-chr15:41611682..41614263,2	K562	blood:
5	chr14:51706560..51707399-chr15:41576064..41576687,2	Hela-S3	cervix:
6	chr15:41601722..41603239-chr15:41610507..41613182,2	K562	blood:
7	chr15:41581933..41584889-chr15:41587370..41590303,3	K562	blood:
8	chr15:40986884..40987798-chr15:41575787..41576375,2	Hela-S3	cervix:
9	chr15:41407604..41409854-chr15:41574990..41577590,2	K562	blood:
10	chr15:41548966..41550602-chr15:41575421..41577159,2	MCF-7	breast:
11	chr15:41601722..41604409-chr15:41611682..41614263,2	K562	blood:
12	chr15:41577922..41579765-chr15:41608421..41610575,2	K562	blood:
13	chr15:41579631..41582972-chr15:41599254..41603170,4	K562	blood:
14	chr15:41554916..41558076-chr15:41560482..41563886,4	K562	blood:
15	chr15:41522934..41525322-chr15:41540683..41542302,2	K562	blood:
16	chr15:41522897..41527944-chr15:41573906..41578128,9	K562	blood:
17	chr15:41575391..41577503-chr15:41623750..41625308,2	MCF-7	breast:
18	chr15:41587115..41589389-chr15:41693080..41695951,2	MCF-7	breast:
19	chr15:41550157..41551774-chr15:41554102..41556216,2	K562	blood:
20	chr15:41593303..41595155-chr15:41597240..41599899,2	K562	blood:
21	chr15:41575902..41576619-chr2:217363468..217364442,2	Hela-S3	cervix:
22	chr15:41601722..41603239-chr15:41610507..41613182,2	K562	blood:
23	chr15:41535934..41538302-chr15:41541101..41542958,2	MCF-7	breast:
24	chr15:41574707..41576422-chr15:41588178..41590438,2	K562	blood:
25	chr15:41577922..41579765-chr15:41608421..41610575,2	K562	blood:
26	chr15:41581131..41583433-chr15:41618949..41620567,2	K562	blood:
27	chr15:41575115..41577125-chr15:41624466..41626801,3	MCF-7	breast:
28	chr15:41581933..41584889-chr15:41587370..41590303,3	K562	blood:
29	chr15:41522629..41527275-chr15:41575215..41577611,6	K562	blood:
30	chr15:41612185..41616768-chr15:41623062..41627065,8	K562	blood:
31	chr15:41548966..41550602-chr15:41575421..41577159,2	MCF-7	breast:
32	chr15:41574968..41578367-chr15:41600315..41603711,4	K562	blood:
33	chr15:41593303..41595155-chr15:41597240..41599899,2	K562	blood:
34	chr15:41524374..41527322-chr15:41542532..41544931,2	K562	blood:
35	chr15:41521136..41528560-chr15:41530721..41537224,13	K562	blood:
36	chr15:41546898..41548900-chr15:41550634..41552926,2	K562	blood:
37	chr15:41555011..41557594-chr15:41575964..41578255,2	K562	blood:
38	chr15:41593982..41596712-chr15:41614556..41616645,2	K562	blood:
39	chr15:41574856..41577423-chr15:41692996..41695992,2	K562	blood:
40	chr15:41575029..41577348-chr15:41624329..41626974,5	K562	blood:
41	chr15:41548726..41552355-chr15:41557074..41560902,3	K562	blood:
42	chr15:41573497..41577986-chr15:41624362..41627823,9	K562	blood:
43	chr15:41575888..41578316-chr15:41582979..41585104,2	MCF-7	breast:
44	chr15:41554916..41558076-chr15:41560482..41563886,4	K562	blood:
45	chr15:41581502..41583044-chr15:41584915..41586594,2	K562	blood:
46	chr15:41576041..41576567-chr6:26198868..26199859,2	Hela-S3	cervix:
47	chr15:41578529..41581280-chr15:41851350..41854253,2	K562	blood:
48	chr15:41575562..41576409-chr16:29827474..29828257,2	Hela-S3	cervix:
49	chr15:41576500..41578232-chr15:41585051..41586799,2	K562	blood:
50	chr15:41569084..41570800-chr15:41575365..41577239,2	MCF-7	breast:

(count:22 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-AC012652.1.1-1	chr15:41576219-41576308	ENSG00000247556.2
2	lnc-AC012652.1.1-1	chr15:41578209-41578632	ENSG00000247556.2
3	lnc-AC012652.1.1-1	chr15:41576229-41576308	ENSG00000247556.2
4	lnc-AC012652.1.1-1	chr15:41600918-41601901	ENSG00000247556
5	lnc-AC012652.1.1-1	chr15:41577423-41577561	ENSG00000247556.2
6	lnc-AC012652.1.1-1	chr15:41590239-41598727	XLOC_011226
7	lnc-OIP5-1	chr15:41588773-41598741	XLOC_011448
8	lnc-OIP5-1	chr15:41590239-41594387	XLOC_011448
9	lnc-AC012652.1.1-1	chr15:41578209-41578298	ENSG00000247556.2
10	lnc-OIP5-1	chr15:41597681-41598727	XLOC_011448
11	lnc-AC012652.1.1-1	chr15:41594573-41598729	NONHSAT041936
12	lnc-AC012652.1.1-1	chr15:41600765-41600822	ENSG00000247556
13	lnc-AC012652.1.1-1	chr15:41579551-41579672	ENSG00000247556.2
14	lnc-AC012652.1.1-1	chr15:41590239-41598727	XLOC_011226
15	lnc-AC012652.1.1-1	chr15:41577423-41577561	ENSG00000247556
16	lnc-OIP5-1	chr15:41578207-41578584	XLOC_011448
17	lnc-AC012652.1.1-1	chr15:41590067-41590127	XLOC_011226
18	lnc-AC012652.1.1-1	chr15:41576230-41576308	ENSG00000247556
19	lnc-AC012652.1.1-1	chr15:41577423-41577561	ENSG00000247556.2
20	lnc-AC012652.1.1-1	chr15:41578209-41578298	ENSG00000247556
21	lnc-AC012652.1.1-1	chr15:41578132-41578298	XLOC_011226
22	lnc-AC012652.1.1-1	chr15:41580181-41580723	ENSG00000247556.2

No data

(count:1 , 50 per page) page: 1

No.	miRNA target gene	miRNA name	Chromosome Location	mirBase accession
1	OIP5	hsa-miR-16-5p	chr15:41601887-41601907

Variant related genes	Relation type
NUSAP1	TF binding region
CHP1	TF binding region
OIP5-AS1	TF binding region
NUSAP1	CpG island
CHP1	CpG island
OIP5-AS1	CpG island
ENSG00000197756	chromatin interactions
ENSG00000137804	chromatin interactions
ENSG00000102158	chromatin interactions
ENSG00000247556	chromatin interactions
ENSG00000178997	chromatin interactions
ENSG00000187446	chromatin interactions
ENSG00000197846	chromatin interactions
ENSG00000104147	chromatin interactions
ENSG00000197409	chromatin interactions
ENSG00000245849	chromatin interactions
ENSG00000232485	chromatin interactions
ENSG00000092445	chromatin interactions
ENSG00000196866	chromatin interactions
ENSG00000051180	chromatin interactions
ENSG00000167842	chromatin interactions
ENSG00000072849	chromatin interactions
ENSG00000139921	chromatin interactions
ENSG00000263136	chromatin interactions
ENSG00000143549	chromatin interactions
ENSG00000174903	chromatin interactions
ENSG00000137806	chromatin interactions
ENSG00000231742	chromatin interactions
ENSG00000128908	chromatin interactions
DICER1	miRNA target sites
CD46	miRNA target sites
ZNF562	miRNA target sites
BTBD3	miRNA target sites
LDLRAP1	miRNA target sites

Extended variants
information (count: 3193 )
Associated
traits (count: 72 )

Variant overlapped rSNPs/rCNVs (count:3193 , 50 per page) page: 1 2 3 4 5 6 7 ... 64

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs2164996	chr15:41536624-41536625	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs533726219	chr15:41536644-41536645	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
3	rs553905597	chr15:41536649-41536650	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
4	rs113825351	chr15:41536789-41536790	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
5	rs193258188	chr15:41536835-41536836	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
6	rs185554376	chr15:41536917-41536918	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
7	rs576556671	chr15:41536941-41536942	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
8	rs189629333	chr15:41536980-41536981	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
9	rs546059577	chr15:41536997-41536998	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
10	rs147111286	chr15:41537044-41537045	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
11	rs180775504	chr15:41537071-41537072	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
12	rs138592114	chr15:41537095-41537096	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
13	rs183674246	chr15:41537167-41537168	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
14	rs188731317	chr15:41537176-41537177	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
15	rs557338254	chr15:41537195-41537196	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
16	rs550234267	chr15:41537263-41537264	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
17	rs562571800	chr15:41537319-41537320	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
18	rs57126801	chr15:41537328-41537329	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
19	rs181110270	chr15:41537355-41537356	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
20	rs568310905	chr15:41537377-41537378	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
21	rs534073853	chr15:41537387-41537388	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
22	rs547455809	chr15:41537401-41537402	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
23	rs375458645	chr15:41537407-41537408	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
24	rs539185255	chr15:41537411-41537412	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
25	rs186977636	chr15:41537417-41537418	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
26	rs576578375	chr15:41537431-41537432	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
27	rs183336082	chr15:41537487-41537488	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
28	rs541671024	chr15:41537518-41537519	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
29	rs146815893	chr15:41537523-41537524	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
30	rs555788601	chr15:41537526-41537527	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
31	rs371367907	chr15:41537538-41537539	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
32	rs28735224	chr15:41537539-41537540	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
33	rs541319116	chr15:41537571-41537572	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
34	rs564177971	chr15:41537576-41537577	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
35	rs112756288	chr15:41537657-41537658	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
36	rs543576289	chr15:41537669-41537670	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
37	rs191561693	chr15:41537728-41537729	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
38	rs138429468	chr15:41537731-41537732	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
39	rs182560981	chr15:41537898-41537899	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
40	rs149266143	chr15:41537969-41537970	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
41	rs187134006	chr15:41537986-41537987	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
42	rs189825785	chr15:41538140-41538141	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
43	rs144513746	chr15:41538150-41538151	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
44	rs58547976	chr15:41538153-41538154	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
45	rs549621037	chr15:41538302-41538303	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
46	rs73402992	chr15:41538328-41538329	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
47	rs147979329	chr15:41538348-41538349	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
48	rs555584071	chr15:41538414-41538415	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
49	rs182275868	chr15:41538495-41538496	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
50	rs201206205	chr15:41538520-41538521	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:72)

Disease	PMID	Source
HDAC8	0	CNVD
NIPBL	0	CNVD
RAD21	0	CNVD
SMC1A	0	CNVD
SMC3	0	CNVD
Ewing''s sarcoma	21437220	CNVD
Schizophrenia	19415332	CNVD
Breast cancer	22522925	CNVD
Autism	22495311	CNVD
Wilms tumour	21544195	CNVD
Angelman syndrome	16183798	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Testicular germ cell tumor	18059402	CNVD
cataract	16735990	CNVD
Cancer	21637783	CNVD
Colorectal cancer	20709793	CNVD
Medulloblastoma	21979893	CNVD
spastic paraplegia with thinning of corpus callosum	19105190	CNVD
Schizophrenia	21324950	CNVD
Astrocytoma	17387387	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Disease	21824424	CNVD
Melanoma	18172304	CNVD
Colorectal cancer	16774939	CNVD
Gastric cancer	17167181	CNVD
Neuroblastoma	19435921	CNVD
Colorectal cancer	19359472	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Colorectal cancer	16272173	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Multiple myeloma	17550852	CNVD
Intellectual disability	22102821	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute myeloid leukemia	20729466	CNVD
Prostate cancer	16573809	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Multiple myeloma	20724749	CNVD
Lung cancer	18438408	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Breast cancer	21785460	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Ovarian cancer	22174824	CNVD
Prostate cancer	18632612	CNVD
small cell lung cancer	20016488	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Basal cell lymphoma	17053054	CNVD
Acute lymphoblastic leukemia	18458336	CNVD
Cancer	20164920	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Cancer	21129771	CNVD
Papillary thyroid carcinoma	22161024	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Breast cancer	21045282	CNVD
Breast cancer	22032731	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Gastrointestinal stromal cancer	20877625	CNVD
Multiple myeloma	16616336	CNVD
Renal cell carcinoma	18765545	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
Myelofibrosis	22110671	CNVD
Maculopathy	20981449	CNVD
Gastric adenocarcinoma	19115996	CNVD
Pancreatic cancer	17952125	CNVD
Renal cell carcinoma	21215367	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD

Chromatin state (count:3019 , 50 per page) page: 1 2 3 4 5 6 7 ... 61

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:41524200-41546200	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
2	chr15:41524200-41554800	Weak transcription	Fetal Thymus	thymus
3	chr15:41524200-41555800	Weak transcription	Aorta	Aorta
4	chr15:41524200-41563800	Weak transcription	Small Intestine	intestine
5	chr15:41524200-41575800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
6	chr15:41524400-41555800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
7	chr15:41524800-41546200	Weak transcription	Primary hematopoietic stem cells	blood
8	chr15:41524800-41563800	Weak transcription	Esophagus	oesophagus
9	chr15:41525000-41548400	Weak transcription	Fetal Lung	lung
10	chr15:41525200-41548200	Weak transcription	Fetal Kidney	kidney
11	chr15:41525200-41554200	Weak transcription	Fetal Brain Female	brain
12	chr15:41525200-41556400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
13	chr15:41525200-41575400	Weak transcription	Pancreatic Islets	Pancreatic Islet
14	chr15:41525400-41538800	Weak transcription	Fetal Muscle Leg	muscle
15	chr15:41525400-41556200	Weak transcription	Primary T killer memory cells from peripheral blood	blood
16	chr15:41525400-41556800	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
17	chr15:41525800-41554800	Weak transcription	Dnd41	blood
18	chr15:41525800-41575200	Weak transcription	Primary T helper naive cells from peripheral blood	blood
19	chr15:41526000-41541800	Weak transcription	Muscle Satellite Cultured Cells	--
20	chr15:41526000-41554800	Weak transcription	Brain Angular Gyrus	brain
21	chr15:41526200-41542200	Weak transcription	NH-A	brain
22	chr15:41526200-41554800	Weak transcription	Colon Smooth Muscle	Colon
23	chr15:41526400-41542200	Weak transcription	HSMMtube	muscle
24	chr15:41532000-41542000	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
25	chr15:41532400-41550600	Strong transcription	Primary monocytes fromperipheralblood	blood
26	chr15:41533200-41539600	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
27	chr15:41533200-41548400	Strong transcription	Monocytes-CD14+_RO01746	blood
28	chr15:41533200-41552400	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
29	chr15:41533400-41537400	Strong transcription	Fetal Muscle Trunk	muscle
30	chr15:41533800-41538600	Strong transcription	Hela-S3	cervix
31	chr15:41533800-41554600	Weak transcription	Brain Anterior Caudate	brain
32	chr15:41533800-41555000	Weak transcription	Brain Inferior Temporal Lobe	brain
33	chr15:41534000-41536800	Weak transcription	Rectal Smooth Muscle	rectum
34	chr15:41534000-41538600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
35	chr15:41534000-41538800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
36	chr15:41534000-41538800	Weak transcription	Cortex derived primary cultured neurospheres	brain
37	chr15:41534000-41541200	Weak transcription	Thymus	Thymus
38	chr15:41534000-41542200	Weak transcription	Skeletal Muscle Male	skeletal muscle
39	chr15:41534000-41543200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
40	chr15:41534000-41555200	Weak transcription	Brain Germinal Matrix	brain
41	chr15:41534200-41537000	Weak transcription	Psoas Muscle	Psoas
42	chr15:41534200-41551000	Weak transcription	GM12878-XiMat	blood
43	chr15:41534200-41555200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
44	chr15:41534200-41556400	Weak transcription	Spleen	Spleen
45	chr15:41534400-41536800	Weak transcription	A549	lung
46	chr15:41534400-41537000	Weak transcription	Osteobl	bone
47	chr15:41534400-41544600	Weak transcription	HSMM	muscle
48	chr15:41534600-41536800	Weak transcription	Rectal Mucosa Donor 29	rectum
49	chr15:41534600-41537800	Strong transcription	Sigmoid Colon	Sigmoid Colon
50	chr15:41534800-41540400	Weak transcription	Stomach Mucosa	stomach

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