Variant report
Variant | nsv1045535 |
---|---|
Chromosome Location | chr14:19689305-20425911 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:3293)
- CpG islands (count:3479)
- Chromatin interactive region (count:5)
- LncRNA region (count:141)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No. | Transcrition factor | Chromosome Location | Cell Line | Cell type | Cell Stage | Matched TF binding sites |
---|---|---|---|---|---|---|
1 | ARID3A | chr14:20346241-20346527 | K562 | blood: | n/a | n/a |
2 | ARID3A | chr14:20387153-20387455 | HepG2 | liver: | n/a | n/a |
3 | ARID3A | chr14:20346227-20346537 | HepG2 | liver: | n/a | n/a |
4 | ATF1 | chr14:19795048-19796237 | K562 | blood: | n/a | n/a |
5 | ATF1 | chr14:20374096-20374405 | K562 | blood: | n/a | n/a |
6 | ATF1 | chr14:20388271-20388560 | K562 | blood: | n/a | n/a |
7 | ATF1 | chr14:19697695-19697910 | K562 | blood: | n/a | n/a |
8 | ATF1 | chr14:20325048-20325100 | K562 | blood: | n/a | n/a |
9 | ATF1 | chr14:19792967-19794009 | K562 | blood: | n/a | n/a |
10 | ATF1 | chr14:20319622-20319703 | K562 | blood: | n/a | n/a |
11 | BACH1 | chr14:19795663-19796213 | K562 | blood: | n/a | n/a |
12 | BACH1 | chr14:20348120-20348235 | K562 | blood: | n/a | n/a |
13 | BATF | chr14:19937503-19937859 | GM12878 | blood: | n/a | chr14:19937698-19937709 |
14 | BATF | chr14:19921485-19921738 | GM12878 | blood: | n/a | n/a |
15 | BATF | chr14:20085953-20086237 | GM12878 | blood: | n/a | n/a |
16 | BATF | chr14:20025214-20025459 | GM12878 | blood: | n/a | n/a |
17 | BATF | chr14:20131255-20131487 | GM12878 | blood: | n/a | n/a |
18 | BATF | chr14:20025031-20025541 | GM12878 | blood: | n/a | n/a |
19 | BATF | chr14:19986920-19987123 | GM12878 | blood: | n/a | n/a |
20 | BATF | chr14:20026256-20026650 | GM12878 | blood: | n/a | n/a |
21 | BATF | chr14:19748478-19748726 | GM12878 | blood: | n/a | n/a |
22 | BATF | chr14:19937525-19937845 | GM12878 | blood: | n/a | chr14:19937698-19937709 |
23 | BATF | chr14:20031700-20032016 | GM12878 | blood: | n/a | n/a |
24 | BATF | chr14:19827024-19827305 | GM12878 | blood: | n/a | n/a |
25 | BCL11A | chr14:19747728-19747905 | GM12878 | blood: | n/a | n/a |
26 | BCL11A | chr14:19826657-19827003 | GM12878 | blood: | n/a | n/a |
27 | BCL11A | chr14:19824315-19824574 | GM12878 | blood: | n/a | n/a |
28 | BCL11A | chr14:19819837-19820033 | GM12878 | blood: | n/a | n/a |
29 | BCL11A | chr14:19747489-19747677 | GM12878 | blood: | n/a | n/a |
30 | BCL11A | chr14:20084307-20084477 | GM12878 | blood: | n/a | n/a |
31 | BCL11A | chr14:19920793-19920958 | GM12878 | blood: | n/a | n/a |
32 | BCL11A | chr14:19748843-19749025 | GM12878 | blood: | n/a | n/a |
33 | BCL11A | chr14:19746165-19746357 | GM12878 | blood: | n/a | n/a |
34 | BCL11A | chr14:19748407-19748711 | GM12878 | blood: | n/a | n/a |
35 | BCL11A | chr14:19827039-19827376 | GM12878 | blood: | n/a | n/a |
36 | BCL11A | chr14:19937474-19937874 | GM12878 | blood: | n/a | n/a |
37 | BCL11A | chr14:19776347-19776520 | GM12878 | blood: | n/a | n/a |
38 | BCL11A | chr14:19826185-19826607 | GM12878 | blood: | n/a | n/a |
39 | BCL11A | chr14:20025076-20025493 | GM12878 | blood: | n/a | chr14:20025351-20025360 |
40 | BCL11A | chr14:19829015-19829207 | GM12878 | blood: | n/a | n/a |
41 | BCL11A | chr14:19827491-19827723 | GM12878 | blood: | n/a | n/a |
42 | BCL11A | chr14:19753894-19754206 | GM12878 | blood: | n/a | n/a |
43 | BCL11A | chr14:19821581-19821893 | GM12878 | blood: | n/a | n/a |
44 | BCL11A | chr14:19937603-19937812 | GM12878 | blood: | n/a | n/a |
45 | BCL11A | chr14:19921178-19921362 | GM12878 | blood: | n/a | n/a |
46 | BHLHE40 | chr14:20136685-20136689 | K562 | blood: | n/a | n/a |
47 | BHLHE40 | chr14:19932458-19932823 | HepG2 | liver: | n/a | chr14:19932665-19932681 chr14:19932534-19932550 |
48 | BHLHE40 | chr14:19978638-19978868 | HepG2 | liver: | n/a | n/a |
49 | BHLHE40 | chr14:19937479-19937774 | HepG2 | liver: | n/a | n/a |
50 | BHLHE40 | chr14:19973726-19973967 | HepG2 | liver: | n/a | n/a |
No. | Chromosome Location | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr14:19888327-19888377 | AG09309 | skin: | n/a |
2 | chr14:19925080-19925130 | HNPCEpiC | eye: | n/a |
3 | chr14:19888327-19888377 | AG09309 | skin: | n/a |
4 | chr14:19925080-19925130 | HNPCEpiC | eye: | n/a |
5 | chr14:20148103-20148153 | HCF | heart: | n/a |
6 | chr14:20106919-20106969 | HRCEpiC | kidney: | n/a |
7 | chr14:20295005-20295055 | A549 | lung: | n/a |
8 | chr14:20135228-20135278 | CMK | blood: | n/a |
9 | chr14:19855384-19855434 | HMEC | breast: | n/a |
10 | chr14:20247697-20247747 | A549 | lung: | n/a |
11 | chr14:19959522-19959572 | GM19239 | blood: | n/a |
12 | chr14:20134518-20134568 | GM12878 | blood: | n/a |
13 | chr14:19950047-19950097 | Hepatocyte | liver: | n/a |
14 | chr14:19890601-19890651 | HIPEpiC | eye: | n/a |
15 | chr14:20136824-20136874 | CMK | blood: | n/a |
16 | chr14:20106919-20106969 | RPTEC | kidney: | n/a |
17 | chr14:19890087-19890137 | HCF | heart: | n/a |
18 | chr14:20247697-20247747 | CMK | blood: | n/a |
19 | chr14:19855113-19855163 | GM06990 | blood: | n/a |
20 | chr14:19964024-19964074 | Jurkat | blood: | n/a |
21 | chr14:19960976-19961026 | NB4 | blood: | n/a |
22 | chr14:19855384-19855434 | HAEpiC | amniotic membrane: | n/a |
23 | chr14:19828288-19828338 | GM12891 | blood: | n/a |
24 | chr14:20136693-20136743 | T-47D | breast: | n/a |
25 | chr14:19858845-19858895 | ECC-1 | luminal epithelium: | n/a |
26 | chr14:20012038-20012088 | NB4 | blood: | n/a |
27 | chr14:20134518-20134568 | SAEC | small airway: | n/a |
28 | chr14:20148125-20148175 | PANC-1 | pancreas: | n/a |
29 | chr14:19829406-19829456 | CMK | blood: | n/a |
30 | chr14:19745841-19745891 | NHBE | bronchial: | n/a |
31 | chr14:19855384-19855434 | HepG2 | liver: | n/a |
32 | chr14:19964024-19964074 | BJ | skin: | n/a |
33 | chr14:19828288-19828338 | IMR90 | lung: | fetal |
34 | chr14:20403239-20403289 | ovcar-3 | ovarian: | n/a |
35 | chr14:19950047-19950097 | GM12891 | blood: | n/a |
36 | chr14:20148125-20148175 | HMEC | breast: | n/a |
37 | chr14:19855113-19855163 | HNPCEpiC | eye: | n/a |
38 | chr14:19855384-19855434 | Hepatocyte | liver: | n/a |
39 | chr14:19960976-19961026 | ECC-1 | luminal epithelium: | n/a |
40 | chr14:20146493-20146543 | AG04449 | skin: | fetal |
41 | chr14:20295616-20295666 | HPAEpiC | pulmonary alveolar: | n/a |
42 | chr14:19888327-19888377 | HRE | kidney: | n/a |
43 | chr14:20146493-20146543 | U87 | brain: | n/a |
44 | chr14:19964024-19964074 | HRCEpiC | kidney: | n/a |
45 | chr14:19888434-19888484 | MCF10A-Er-Src | breast: | n/a |
46 | chr14:19962440-19962490 | NHBE | bronchial: | n/a |
47 | chr14:20146694-20146744 | HAEpiC | amniotic membrane: | n/a |
48 | chr14:19719117-19719167 | NT2-D1 | testis: | n/a |
49 | chr14:20387292-20387342 | HCF | heart: | n/a |
50 | chr14:20295005-20295055 | GM12878 | blood: | n/a |
(count:5 , 50 per page) page:
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No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr14:20330082..20332945-chr14:20336237..20338891,2 | K562 | blood: | |
2 | chr14:20382435..20385861-chr14:20389212..20390807,3 | K562 | blood: | |
3 | chr14:20421291..20423829-chr14:20424473..20427279,2 | MCF-7 | breast: | |
4 | chr14:20382435..20385861-chr14:20389212..20390807,3 | K562 | blood: | |
5 | chr14:20378405..20379102-chr22:33621834..33622612,2 | MCF-7 | breast: |
No. | lncRNA name | Chromosome Location | lncRNA alias |
---|---|---|---|
1 | lnc-POTEM-2 | chr14:19921359-19921455 | ENSG00000244306 |
2 | lnc-POTEM-2 | chr14:19921591-19921738 | ENSG00000244306 |
3 | lnc-POTEM-2 | chr14:19919492-19919629 | ENSG00000244306 |
4 | lnc-POTEM-2 | chr14:19925240-19925346 | ENSG00000244306 |
5 | lnc-POTEM-1 | chr14:19968877-19969021 | ENSG00000257931 |
6 | lnc-OR4N2-3 | chr14:20008836-20010956 | NR_110505 |
7 | lnc-POTEM-2 | chr14:19925240-19925306 | ENSG00000244306 |
8 | lnc-POTEM-2 | chr14:19925240-19925288 | ENSG00000244306 |
9 | lnc-POTEM-2 | chr14:19921591-19921738 | NONHSAT035503 |
10 | lnc-POTEM-2 | chr14:19880209-19884029 | NONHSAT035503 |
11 | lnc-POTEM-2 | chr14:19912755-19913184 | ENSG00000244306 |
12 | lnc-POTEM-2 | chr14:19921359-19921470 | NONHSAT035503 |
13 | lnc-POTEM-1 | chr14:19963420-19963689 | ENSG00000257931 |
14 | lnc-POTEG-4 | chr14:19691355-19691404 | NONHSAT035478 |
15 | lnc-POTEM-2 | chr14:19880059-19884029 | ENSG00000244306 |
16 | lnc-POTEM-2 | chr14:19919138-19919273 | NR_110526 |
17 | lnc-POTEM-2 | chr14:19925240-19925333 | NONHSAT035521 |
18 | lnc-POTEM-2 | chr14:19923013-19923123 | ENSG00000244306 |
19 | lnc-POTEM-2 | chr14:19919492-19919629 | ENSG00000244306 |
20 | lnc-POTEM-1 | chr14:19955880-19955945 | ENSG00000257931 |
21 | lnc-POTEM-2 | chr14:19882464-19884029 | ENSG00000244306 |
22 | lnc-POTEM-2 | chr14:19921359-19921470 | ENSG00000244306 |
23 | lnc-OR4N2-3 | chr14:20006913-20007358 | ENSG00000258276 |
24 | lnc-POTEM-2 | chr14:19919138-19919273 | ENSG00000244306 |
25 | lnc-POTEM-2 | chr14:19919138-19919273 | ENSG00000244306 |
26 | lnc-POTEM-2 | chr14:19894700-19894790 | NONHSAT035503 |
27 | lnc-POTEG-4 | chr14:19718326-19718379 | NONHSAT035478 |
28 | lnc-POTEM-2 | chr14:19919134-19919273 | ENSG00000244306 |
29 | lnc-POTEM-2 | chr14:19921359-19921470 | NR_110526 |
30 | lnc-POTEM-2 | chr14:19919138-19919158 | ENSG00000244306 |
31 | lnc-OR4N2-4 | chr14:19896785-19896872 | XLOC_010749 |
32 | lnc-POTEM-2 | chr14:19919138-19919273 | ENSG00000244306 |
33 | lnc-POTEM-3 | chr14:19858667-19861377 | ENSG00000249549 |
34 | lnc-POTEM-2 | chr14:19923013-19923123 | NR_110526 |
35 | lnc-POTEM-2 | chr14:19923013-19923123 | ENSG00000244306 |
36 | lnc-POTEM-4 | chr14:20146951-20147175 | ENSG00000259069.1 |
37 | lnc-POTEM-2 | chr14:19919138-19919273 | ENSG00000244306 |
38 | lnc-POTEM-6 | chr14:19837830-19837836 | ENSG00000257898.1 |
39 | lnc-POTEM-2 | chr14:19912015-19913438 | ENSG00000244306 |
40 | lnc-POTEM-2 | chr14:19919138-19919273 | ENSG00000244306 |
41 | lnc-POTEM-2 | chr14:19921591-19921705 | NONHSAT035521 |
42 | lnc-POTEM-1 | chr14:19955880-19955945 | ENSG00000257931 |
43 | lnc-POTEM-2 | chr14:19891517-19892052 | ENSG00000244306 |
44 | lnc-POTEM-2 | chr14:19911916-19913315 | NONHSAT035515 |
45 | lnc-POTEM-2 | chr14:19894700-19894790 | ENSG00000244306 |
46 | lnc-POTEM-2 | chr14:19925240-19925333 | NONHSAT035503 |
47 | lnc-OR4N2-4 | chr14:19901742-19901892 | ENSG00000215394 |
48 | lnc-POTEM-2 | chr14:19919492-19919629 | NONHSAT035503 |
49 | lnc-POTEM-2 | chr14:19894700-19894790 | ENSG00000244306 |
50 | lnc-POTEM-2 | chr14:19881070-19881410 | ucscGeneNc_uc001vxa_1 |
No data |
No data |
Variant related genes | Relation type |
---|---|
ENSG00000259016 | TF binding region |
OR4K5 | TF binding region |
ENSG00000244306 | TF binding region |
ENSG00000257142 | TF binding region |
ENSG00000259069 | TF binding region |
OR4K4P | TF binding region |
ENSG00000257884 | TF binding region |
ENSG00000258324 | TF binding region |
OR4K3 | TF binding region |
ARHGAP42P4 | TF binding region |
ENSG00000238492 | TF binding region |
OR4K16P | TF binding region |
ENSG00000257573 | TF binding region |
ENSG00000257846 | TF binding region |
BMS1P18 | TF binding region |
OR11H2 | TF binding region |
ENSG00000257357 | TF binding region |
ENSG00000257868 | TF binding region |
OR4N2 | TF binding region |
OR11H13P | TF binding region |
ENSG00000258027 | TF binding region |
OR4K1 | TF binding region |
ENSG00000258198 | TF binding region |
MED15P6 | TF binding region |
OR4M1 | TF binding region |
BMS1P17 | TF binding region |
ENSG00000258781 | TF binding region |
OR11K2P | TF binding region |
ENSG00000257395 | TF binding region |
OR4N1P | TF binding region |
ENSG00000257493 | TF binding region |
OR4Q3 | TF binding region |
ENSG00000258276 | TF binding region |
ENSG00000271632 | TF binding region |
OR4H12P | TF binding region |
ENSG00000257931 | TF binding region |
OR4K6P | TF binding region |
ENSG00000257310 | TF binding region |
GRAMD4P4 | TF binding region |
ENSG00000257751 | TF binding region |
RNU6-1268P | TF binding region |
ENSG00000257749 | TF binding region |
ENSG00000258188 | TF binding region |
ENSG00000257977 | TF binding region |
ENSG00000257432 | TF binding region |
POTEM | TF binding region |
OR4K2 | TF binding region |
DUXAP10 | TF binding region |
ENSG00000259016 | CpG island |
OR4K5 | CpG island |
ENSG00000244306 | CpG island |
ENSG00000257142 | CpG island |
ENSG00000259069 | CpG island |
OR4K4P | CpG island |
ENSG00000257884 | CpG island |
ENSG00000258324 | CpG island |
OR4K3 | CpG island |
ARHGAP42P4 | CpG island |
ENSG00000238492 | CpG island |
OR4K16P | CpG island |
ENSG00000257573 | CpG island |
ENSG00000257846 | CpG island |
BMS1P18 | CpG island |
OR11H2 | CpG island |
ENSG00000257357 | CpG island |
ENSG00000257868 | CpG island |
OR4N2 | CpG island |
OR11H13P | CpG island |
ENSG00000258027 | CpG island |
OR4K1 | CpG island |
ENSG00000258198 | CpG island |
MED15P6 | CpG island |
OR4M1 | CpG island |
BMS1P17 | CpG island |
ENSG00000258781 | CpG island |
OR11K2P | CpG island |
ENSG00000257395 | CpG island |
OR4N1P | CpG island |
ENSG00000257493 | CpG island |
OR4Q3 | CpG island |
ENSG00000258276 | CpG island |
ENSG00000271632 | CpG island |
OR4H12P | CpG island |
ENSG00000257931 | CpG island |
OR4K6P | CpG island |
ENSG00000257310 | CpG island |
GRAMD4P4 | CpG island |
ENSG00000257751 | CpG island |
RNU6-1268P | CpG island |
ENSG00000257749 | CpG island |
ENSG00000258188 | CpG island |
ENSG00000257977 | CpG island |
ENSG00000257432 | CpG island |
POTEM | CpG island |
OR4K2 | CpG island |
DUXAP10 | CpG island |
ENSG00000258822 | chromatin interactions |
ENSG00000176290 | chromatin interactions |
No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs61968607 | chr14:19689560-19689561 | Inactive region | TF binding region | 2 gene(s) | Overlapped CNVs | n/a |
2 | rs78033982 | chr14:19689646-19689647 | Inactive region | TF binding region | 2 gene(s) | Overlapped CNVs | n/a |
3 | rs562701233 | chr14:19689828-19689829 | Inactive region | TF binding region | 2 gene(s) | Overlapped CNVs | n/a |
4 | rs530233494 | chr14:19689829-19689830 | Inactive region | TF binding region | 2 gene(s) | Overlapped CNVs | n/a |
5 | rs368303877 | chr14:19689848-19689849 | Inactive region | TF binding region | 2 gene(s) | Overlapped CNVs | n/a |
6 | rs199929775 | chr14:19690391-19690392 | Inactive region | TF binding region | 2 gene(s) | Overlapped CNVs | n/a |
7 | rs201066361 | chr14:19690573-19690574 | Inactive region | TF binding regionlncRNA | 2 gene(s) | Overlapped CNVs | n/a |
8 | rs200252569 | chr14:19690623-19690624 | Inactive region | TF binding region | 2 gene(s) | Overlapped CNVs | n/a |
9 | rs201023761 | chr14:19690624-19690625 | Inactive region | TF binding region | 2 gene(s) | Overlapped CNVs | n/a |
10 | rs552522314 | chr14:19690701-19690702 | Inactive region | TF binding region | 2 gene(s) | Overlapped CNVs | n/a |
11 | rs570905965 | chr14:19690714-19690715 | Inactive region | TF binding region | 2 gene(s) | Overlapped CNVs | n/a |
12 | rs61968611 | chr14:19690743-19690744 | Inactive region | TF binding region | 2 gene(s) | Overlapped CNVs | n/a |
13 | rs200607265 | chr14:19690757-19690758 | Inactive region | TF binding region | 2 gene(s) | Overlapped CNVs | n/a |
14 | rs538334299 | chr14:19690806-19690807 | Inactive region | TF binding region | 2 gene(s) | Overlapped CNVs | n/a |
15 | rs550309532 | chr14:19690820-19690821 | Inactive region | TF binding region | 2 gene(s) | Overlapped CNVs | n/a |
16 | rs61968612 | chr14:19690834-19690835 | Inactive region | TF binding region | 2 gene(s) | Overlapped CNVs | n/a |
17 | rs568216616 | chr14:19690842-19690843 | Inactive region | TF binding region | 2 gene(s) | Overlapped CNVs | n/a |
18 | rs61968613 | chr14:19690883-19690884 | Inactive region | TF binding region | 2 gene(s) | Overlapped CNVs | n/a |
19 | rs535664665 | chr14:19690885-19690886 | Inactive region | TF binding region | 2 gene(s) | Overlapped CNVs | n/a |
20 | rs202002773 | chr14:19690893-19690894 | Inactive region | TF binding region | 2 gene(s) | Overlapped CNVs | n/a |
21 | rs61968614 | chr14:19690950-19690951 | Inactive region | TF binding region | 2 gene(s) | Overlapped CNVs | n/a |
22 | rs112987959 | chr14:19692030-19692031 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
23 | rs111840447 | chr14:19692034-19692035 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
24 | rs376020288 | chr14:19692643-19692644 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
25 | rs553752560 | chr14:19692815-19692816 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
26 | rs572279659 | chr14:19692816-19692817 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
27 | rs201040828 | chr14:19692825-19692826 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
28 | rs370426505 | chr14:19692829-19692830 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
29 | rs539394911 | chr14:19693014-19693015 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
30 | rs373422730 | chr14:19693045-19693046 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
31 | rs557723774 | chr14:19693066-19693067 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
32 | rs575639945 | chr14:19693213-19693214 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
33 | rs543066590 | chr14:19693226-19693227 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
34 | rs77362942 | chr14:19693227-19693228 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
35 | rs202016994 | chr14:19693230-19693231 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
36 | rs112354513 | chr14:19693243-19693244 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
37 | rs561467763 | chr14:19693251-19693252 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
38 | rs147661392 | chr14:19693254-19693255 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
39 | rs574658089 | chr14:19693329-19693330 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
40 | rs542394145 | chr14:19693340-19693341 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
41 | rs377724128 | chr14:19693424-19693425 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
42 | rs371355329 | chr14:19693453-19693454 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
43 | rs372213148 | chr14:19693534-19693535 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
44 | rs560551270 | chr14:19693597-19693598 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
45 | rs527984982 | chr14:19693630-19693631 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
46 | rs375602766 | chr14:19693712-19693713 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
47 | rs200313874 | chr14:19693741-19693742 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
48 | rs552637074 | chr14:19693971-19693972 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
49 | rs61968615 | chr14:19693978-19693979 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
50 | rs201119819 | chr14:19694058-19694059 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
Disease | PMID | Source |
---|---|---|
Cancer | 20164920 | CNVD |
Esophageal cancer | 21851588 | CNVD |
Ewing''s sarcoma | 21437220 | CNVD |
Glioblastoma multiforme | 21080181 | CNVD |
Retinoblastoma | 21504564 | CNVD |
High-proliferative meningiomas | 17937814 | CNVD |
Thoracic aortic aneurysm | 21092924 | CNVD |
Autism | 22495311 | CNVD |
Cone-rod dystrophy | 18421352 | CNVD |
T-cell acute lymphoblastic leukemia | 20065082 | CNVD |
T-cell prolymphocytic leukemia | 19278963 | CNVD |
Acute lymphoblastic leukemia | 20067559 | CNVD |
Non-small cell lung cancer | 21044232 | CNVD |
Renal cell carcinoma | 19461508 | CNVD |
Cancer | 21637783 | CNVD |
Colorectal cancer | 20709793 | CNVD |
Melanoma | 18172304 | CNVD |
Esophageal squamous carcinoma | 21637470 | CNVD |
Medulloblastoma | 21979893 | CNVD |
Oral cancer | 21386901 | CNVD |
Endometrial cancer | 22040021 | CNVD |
Breast cancer | 21264507 | CNVD |
Hepatocellular carcinoma | 22174799 | CNVD |
Breast cancer | 17899364 | CNVD |
Colorectal cancer | 16774939 | CNVD |
Neuroblastoma | 19435921 | CNVD |
Colorectal cancer | 19359472 | CNVD |
Gastrointestinal stromal cancer | 19259404 | CNVD |
Gastrointestinal stromal cancer | 17535989 | CNVD |
Monoclonal gammopathy of undetermined significance | 17077331 | CNVD |
Paraganglioma | 17535989 | CNVD |
Pulmonary chondroma | 17535989 | CNVD |
Endometrioid adenocarcinoma | 16974079 | CNVD |
Myelofibrosis | 22110671 | CNVD |
Alzheimer''s disease | 21482944 | CNVD |
Mental retardation | 19951919 | CNVD |
Neuroblastoma | 21899760 | CNVD |
Cutaneous T-cell lymphoma | 21881587 | CNVD |
Heart disease | 21282601 | CNVD |
Esophageal cancer | 20955586 | CNVD |
Neurodevelopmental disorder | 22521361 | CNVD |
Lung cancer | 16773561 | CNVD |
Multiple myeloma | 16616336 | CNVD |
Cancer | 17440070 | CNVD |
Breast cancer | 16272173 | CNVD |
Oral squamous cell carcinoma | 17134496 | CNVD |
Epilepsy | 20736978 | CNVD |
Mental retardation | 20736978 | CNVD |
severe speech impairment | 20736978 | CNVD |
speech impairment | 20736978 | CNVD |
Gastrointestinal stromal cancer | 16982739 | CNVD |
small cell lung cancer | 20016488 | CNVD |
Developmental delay | 21147756 | CNVD |
Acute lymphoblastic leukemia | 20435627 | CNVD |
Lung cancer | 18438408 | CNVD |
Gastrointestinal stromal cancer | 20818650 | CNVD |
Renal cell carcinoma | 21668985 | CNVD |
Breast cancer | 21364760 | CNVD |
Prostate cancer | 18632612 | CNVD |
Hodgkin''s lymphoma | 17606441 | CNVD |
Ependymoma | 20639864 | CNVD |
Pancreatic ductal adenocarcinoma | 19077451 | CNVD |
Breast cancer | 22522925 | CNVD |
Pancreatic cancer | 17952125 | CNVD |
Schizophrenia | 23813976 | CNVD |
Chronic myeloid leukemia | 20724749 | CNVD |
Breast cancer | 20668451 | CNVD |
Cancer | 20668451 | CNVD |
Lung cancer | 20668451 | CNVD |
Ovarian cancer | 20668451 | CNVD |
Pancreas cancer | 20668451 | CNVD |
Prostate cancer | 20668451 | CNVD |
Breast cancer | 21509527 | CNVD |
Amyotrophic lateral sclerosis | 20685689 | CNVD |
Non-syndromic sensorineural hearing loss | 18451855 | CNVD |
Autism | 20531469 | CNVD |
Non-syndromic sensorineural hearing loss | 17122850 | CNVD |
Non-syndromic sensorineural hearing loss | 22037309 | CNVD |
Ovarian cancer | 21720365 | CNVD |
Non-syndromic sensorineural hearing loss | 17431168 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr14:19761400-19761600 | Enhancers | Dnd41 | blood |
2 | chr14:19763800-19764600 | Weak transcription | Dnd41 | blood |
3 | chr14:19764600-19764800 | Enhancers | Dnd41 | blood |
4 | chr14:19764800-19766400 | Weak transcription | Dnd41 | blood |
5 | chr14:19766400-19768200 | Enhancers | Dnd41 | blood |
6 | chr14:19768200-19771800 | Weak transcription | Dnd41 | blood |
7 | chr14:19771800-19772200 | Active TSS | Dnd41 | blood |
8 | chr14:19772200-19772600 | Flanking Active TSS | Dnd41 | blood |
9 | chr14:19772600-19772800 | Active TSS | Dnd41 | blood |
10 | chr14:19772800-19774000 | Transcr. at gene 5' and 3' | Dnd41 | blood |
11 | chr14:19774000-19775200 | Weak transcription | Dnd41 | blood |
12 | chr14:19775200-19775600 | Flanking Active TSS | Dnd41 | blood |
13 | chr14:19775600-19781000 | Weak transcription | Dnd41 | blood |
14 | chr14:19781000-19781200 | Enhancers | Dnd41 | blood |
15 | chr14:19781200-19783600 | Weak transcription | Dnd41 | blood |
16 | chr14:19783800-19784200 | Enhancers | H9 Derived Neuron Cultured Cells | ES cell derived |
17 | chr14:19784000-19784200 | Enhancers | Dnd41 | blood |
18 | chr14:19785800-19786000 | ZNF genes & repeats | iPS DF 19.11 Cell Line | embryonic stem cell |
19 | chr14:19789600-19790400 | Enhancers | ES-I3 Cell Line | embryonic stem cell |
20 | chr14:19792800-19794200 | ZNF genes & repeats | iPS DF 19.11 Cell Line | embryonic stem cell |
21 | chr14:19793000-19793200 | Bivalent/Poised TSS | Brain Hippocampus Middle | brain |
22 | chr14:19793000-19793400 | ZNF genes & repeats | HUES64 Cell Line | embryonic stem cell |
23 | chr14:19793000-19793800 | ZNF genes & repeats | Fetal Lung | lung |
24 | chr14:19793000-19796000 | ZNF genes & repeats | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
25 | chr14:19793000-19796000 | ZNF genes & repeats | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
26 | chr14:19793000-19796000 | ZNF genes & repeats | HUES48 Cell Line | embryonic stem cell |
27 | chr14:19793000-19796200 | ZNF genes & repeats | ES-UCSF4 Cell Line | embryonic stem cell |
28 | chr14:19793200-19794400 | ZNF genes & repeats | iPS-15b Cell Line | embryonic stem cell |
29 | chr14:19793400-19795400 | ZNF genes & repeats | iPS-18 Cell Line | embryonic stem cell |
30 | chr14:19794000-19796000 | Enhancers | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
31 | chr14:19794800-19795400 | Enhancers | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
32 | chr14:19795000-19796200 | Enhancers | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
33 | chr14:19795200-19795800 | Enhancers | Pancreatic Islets | Pancreatic Islet |
34 | chr14:19795200-19796000 | Enhancers | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
35 | chr14:19795400-19795600 | Flanking Active TSS | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
36 | chr14:19795600-19795800 | Enhancers | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
37 | chr14:19795800-19796000 | Enhancers | ES-I3 Cell Line | embryonic stem cell |
38 | chr14:19795800-19796000 | Flanking Active TSS | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
39 | chr14:19806400-19806800 | Active TSS | Brain Substantia Nigra | brain |
40 | chr14:19806600-19807200 | ZNF genes & repeats | iPS DF 6.9 Cell Line | embryonic stem cell |
41 | chr14:19806800-19807400 | Bivalent/Poised TSS | Brain Substantia Nigra | brain |
42 | chr14:19807200-19810800 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
43 | chr14:19810800-19811000 | ZNF genes & repeats | iPS DF 6.9 Cell Line | embryonic stem cell |
44 | chr14:19811000-19812800 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
45 | chr14:19812800-19813000 | ZNF genes & repeats | iPS DF 6.9 Cell Line | embryonic stem cell |
46 | chr14:19814600-19814800 | ZNF genes & repeats | iPS DF 19.11 Cell Line | embryonic stem cell |
47 | chr14:19814800-19817400 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
48 | chr14:19817400-19820200 | ZNF genes & repeats | iPS DF 19.11 Cell Line | embryonic stem cell |
49 | chr14:19818600-19823600 | Weak transcription | Pancreas | Pancrea |
50 | chr14:19819400-19820200 | ZNF genes & repeats | iPS-20b Cell Line | embryonic stem cell |