Variant report

Variant	nsv1046590
Chromosome Location	chr9:104450624-104848588
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:2113)
CpG islands
(count:427)
Chromatin interactive
region (count:57)
LncRNA
region (count:7)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:2113 , 50 per page) page: 1 2 3 4 5 6 7 ... 43

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr9:104604440-104604568	K562	blood:	n/a	n/a
2	ARID3A	chr9:104689227-104689231	K562	blood:	n/a	n/a
3	ARID3A	chr9:104603974-104604201	K562	blood:	n/a	n/a
4	ARID3A	chr9:104604790-104605089	K562	blood:	n/a	n/a
5	ARID3A	chr9:104656203-104656979	K562	blood:	n/a	n/a
6	ARID3A	chr9:104490072-104490256	HepG2	liver:	n/a	n/a
7	ARID3A	chr9:104602870-104603634	K562	blood:	n/a	n/a
8	ATF1	chr9:104667150-104667409	K562	blood:	n/a	n/a
9	ATF1	chr9:104692769-104692902	K562	blood:	n/a	n/a
10	ATF1	chr9:104602937-104603620	K562	blood:	n/a	n/a
11	ATF2	chr9:104499005-104499385	H1-hESC	embryonic stem cell:	n/a	n/a
12	ATF3	chr9:104602886-104603521	K562	blood:	n/a	n/a
13	BACH1	chr9:104666707-104666740	K562	blood:	n/a	n/a
14	BACH1	chr9:104490409-104490758	H1-hESC	embryonic stem cell:	n/a	n/a
15	BACH1	chr9:104500655-104501144	H1-hESC	embryonic stem cell:	n/a	n/a
16	BCL3	chr9:104603020-104603535	K562	blood:	n/a	n/a
17	BCLAF1	chr9:104602989-104603485	K562	blood:	n/a	n/a
18	BHLHE40	chr9:104602981-104603519	K562	blood:	n/a	n/a
19	BHLHE40	chr9:104693595-104693643	GM12878	blood:	n/a	n/a
20	BHLHE40	chr9:104641860-104641886	GM12878	blood:	n/a	n/a
21	BHLHE40	chr9:104603872-104603981	K562	blood:	n/a	n/a
22	BHLHE40	chr9:104629233-104629302	K562	blood:	n/a	n/a
23	BHLHE40	chr9:104656000-104656660	K562	blood:	n/a	n/a
24	BHLHE40	chr9:104808797-104808879	HepG2	liver:	n/a	n/a
25	BRCA1	chr9:104525751-104525924	Hela-S3	cervix:	n/a	n/a
26	BRCA1	chr9:104490478-104490697	H1-hESC	embryonic stem cell:	n/a	n/a
27	CBX3	chr9:104601296-104601594	K562	blood:	n/a	n/a
28	CBX3	chr9:104602864-104603528	K562	blood:	n/a	n/a
29	CBX3	chr9:104656265-104656906	K562	blood:	n/a	n/a
30	CBX3	chr9:104602902-104603580	K562	blood:	n/a	n/a
31	CCNT2	chr9:104602949-104603796	K562	blood:	n/a	n/a
32	CCNT2	chr9:104656253-104656608	K562	blood:	n/a	n/a
33	CEBPB	chr9:104795979-104796078	HepG2	liver:	n/a	chr9:104796033-104796044 chr9:104796032-104796045
34	CEBPB	chr9:104557453-104557803	HepG2	liver:	n/a	chr9:104557616-104557627
35	CEBPB	chr9:104557439-104557795	IMR90	lung:	n/a	chr9:104557616-104557627
36	CEBPB	chr9:104847891-104848112	H1-hESC	embryonic stem cell:	n/a	chr9:104848017-104848028
37	CEBPB	chr9:104643934-104644220	H1-hESC	embryonic stem cell:	n/a	n/a
38	CEBPB	chr9:104553821-104554141	A549	lung:	n/a	n/a
39	CEBPB	chr9:104847855-104848192	HepG2	liver:	n/a	chr9:104848017-104848028
40	CEBPB	chr9:104603004-104603626	K562	blood:	n/a	n/a
41	CEBPB	chr9:104653098-104653298	HepG2	liver:	n/a	chr9:104653155-104653166 chr9:104653155-104653168
42	CEBPB	chr9:104684397-104684686	IMR90	lung:	n/a	chr9:104684525-104684534 chr9:104684523-104684536
43	CEBPB	chr9:104726861-104727114	A549	lung:	n/a	chr9:104726984-104726995 chr9:104727014-104727025
44	CEBPB	chr9:104657056-104657181	K562	blood:	n/a	n/a
45	CEBPB	chr9:104557510-104557633	K562	blood:	n/a	chr9:104557616-104557627
46	CEBPB	chr9:104725632-104725661	HepG2	liver:	n/a	chr9:104725637-104725648
47	CEBPB	chr9:104586855-104587085	K562	blood:	n/a	chr9:104587024-104587035 chr9:104587023-104587034 chr9:104587023-104587034
48	CEBPB	chr9:104757408-104758008	ECC-1	luminal epithelium:	n/a	n/a
49	CEBPB	chr9:104684384-104684709	K562	blood:	n/a	chr9:104684525-104684534 chr9:104684523-104684536
50	CEBPB	chr9:104455939-104456199	HepG2	liver:	n/a	chr9:104456091-104456102

(count:427 , 50 per page) page: 1 2 3 4 5 6 7 ... 9

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr9:104499700-104499750	IMR90	lung:	fetal
2	chr9:104500954-104501004	GM19239	blood:	n/a
3	chr9:104500729-104500779	AG09319	gingival:	n/a
4	chr9:104501030-104501080	GM12891	blood:	n/a
5	chr9:104499850-104499900	LNCaP	prostate:	n/a
6	chr9:104501030-104501080	HPAEpiC	pulmonary alveolar:	n/a
7	chr9:104500729-104500779	BE2_C	brain:	n/a
8	chr9:104500958-104501008	HMEC	breast:	n/a
9	chr9:104500322-104500372	SK-N-SH	brain:	n/a
10	chr9:104499850-104499900	NT2-D1	testis:	n/a
11	chr9:104501030-104501080	Hela-S3	cervix:	n/a
12	chr9:104501030-104501080	CMK	blood:	n/a
13	chr9:104499700-104499750	HEEpiC	esophagus:	n/a
14	chr9:104500954-104501004	SK-N-SH_RA	brain:	n/a
15	chr9:104501030-104501080	HRCEpiC	kidney:	n/a
16	chr9:104499700-104499750	SKMC	muscle:	n/a
17	chr9:104500322-104500372	CMK	blood:	n/a
18	chr9:104500954-104501004	Caco-2	colon:	n/a
19	chr9:104500322-104500372	HEEpiC	esophagus:	n/a
20	chr9:104500729-104500779	AoSMC	blood vessel:	n/a
21	chr9:104499850-104499900	GM12878	blood:	n/a
22	chr9:104500954-104501004	GM12892	blood:	n/a
23	chr9:104500954-104501004	AG09319	gingival:	n/a
24	chr9:104500954-104501004	HUVEC	blood vessel:	n/a
25	chr9:104500322-104500372	GM12891	blood:	n/a
26	chr9:104500954-104501004	AG10803	skin:	n/a
27	chr9:104501030-104501080	Caco-2	colon:	n/a
28	chr9:104500729-104500779	Caco-2	colon:	n/a
29	chr9:104499850-104499900	HPAEpiC	pulmonary alveolar:	n/a
30	chr9:104501030-104501080	SKMC	muscle:	n/a
31	chr9:104500729-104500779	NHBE	bronchial:	n/a
32	chr9:104500958-104501008	GM12878	blood:	n/a
33	chr9:104500322-104500372	MCF-7	breast:	n/a
34	chr9:104500322-104500372	GM19239	blood:	n/a
35	chr9:104499700-104499750	Hepatocyte	liver:	n/a
36	chr9:104501030-104501080	BJ	skin:	n/a
37	chr9:104500954-104501004	HCM	heart:	n/a
38	chr9:104500954-104501004	Hepatocyte	liver:	n/a
39	chr9:104499700-104499750	SAEC	small airway:	n/a
40	chr9:104499850-104499900	ovcar-3	ovarian:	n/a
41	chr9:104501030-104501080	AG04449	skin:	fetal
42	chr9:104499700-104499750	HCT-116	colon:	n/a
43	chr9:104499850-104499900	SKMC	muscle:	n/a
44	chr9:104500958-104501008	HRCEpiC	kidney:	n/a
45	chr9:104499850-104499900	PFSK-1	brain:	n/a
46	chr9:104499850-104499900	HRE	kidney:	n/a
47	chr9:104500729-104500779	HEK293	kidney:	embryo
48	chr9:104500322-104500372	SAEC	small airway:	n/a
49	chr9:104500954-104501004	HEK293	kidney:	embryo
50	chr9:104500322-104500372	HNPCEpiC	eye:	n/a

(count:57 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr9:104752145..104755127-chr9:104756633..104759561,2	MCF-7	breast:
2	chr9:104828978..104830886-chr9:104836828..104839477,2	K562	blood:
3	chr9:104626627..104628605-chr9:104630406..104631919,2	K562	blood:
4	chr9:104846252..104847873-chr9:104851668..104854284,2	K562	blood:
5	chr9:104656494..104659292-chr9:104659378..104660947,2	K562	blood:
6	chr9:104628351..104631183-chr9:104634996..104637004,2	K562	blood:
7	chr9:104600370..104602657-chr9:104607856..104609607,2	K562	blood:
8	chr9:104463930..104467725-chr9:104467754..104469771,4	MCF-7	breast:
9	chr9:104602976..104605098-chr9:104654861..104656583,2	K562	blood:
10	chr9:104712078..104714404-chr9:104717443..104718985,2	K562	blood:
11	chr9:104656494..104659292-chr9:104659378..104660947,2	K562	blood:
12	chr9:104662236..104665131-chr9:104665548..104668439,2	K562	blood:
13	chr9:104554048..104554859-chr9:104734774..104735456,4	MCF-7	breast:
14	chr8:142134647..142136266-chr9:104766043..104767800,2	MCF-7	breast:
15	chr9:104628351..104631183-chr9:104634996..104637004,2	K562	blood:
16	chr9:104211442..104212247-chr9:104489980..104490720,3	K562	blood:
17	chr9:104703090..104705673-chr9:104707089..104708983,2	MCF-7	breast:
18	chr9:104529138..104530867-chr9:104533732..104536723,2	K562	blood:
19	chr9:104554304..104554879-chr9:107148429..107149219,2	MCF-7	breast:
20	chr10:86116689..86117545-chr9:104638316..104638864,2	MCF-7	breast:
21	chr9:104534684..104536933-chr9:104538278..104540964,2	K562	blood:
22	chr9:104658581..104661092-chr9:104661771..104663841,2	K562	blood:
23	chr10:26587616..26588136-chr9:104616741..104617261,2	MCF-7	breast:
24	chr9:104651692..104653674-chr9:104654831..104656536,3	K562	blood:
25	chr9:104703090..104705673-chr9:104707089..104708983,2	MCF-7	breast:
26	chr9:104618154..104619898-chr9:104623303..104626288,2	K562	blood:
27	chr9:104828978..104830886-chr9:104836828..104839477,2	K562	blood:
28	chr9:104626627..104628605-chr9:104630406..104631919,2	K562	blood:
29	chr9:104719927..104722291-chr9:104723715..104725489,2	K562	blood:
30	chr9:104736126..104738310-chr9:104738745..104740994,2	K562	blood:
31	chr9:104493214..104495968-chr9:104498085..104500159,2	K562	blood:
32	chr9:104472870..104474526-chr9:104475820..104477413,2	K562	blood:
33	chr9:104594444..104596154-chr9:104597009..104599073,2	MCF-7	breast:
34	chr9:104554048..104554859-chr9:104734774..104735456,4	MCF-7	breast:
35	chr9:104790240..104792584-chr9:104811133..104813780,2	K562	blood:
36	chr9:104534684..104536933-chr9:104538278..104540964,2	K562	blood:
37	chr9:104733654..104735932-chr9:104741852..104744249,2	K562	blood:
38	chr9:104529138..104530867-chr9:104533732..104536723,2	K562	blood:
39	chr9:104602976..104605098-chr9:104654861..104656583,2	K562	blood:
40	chr9:104441179..104443367-chr9:104448568..104451134,2	K562	blood:
41	chr9:104600370..104602657-chr9:104607856..104609607,2	K562	blood:
42	chr9:104594444..104596154-chr9:104597009..104599073,2	MCF-7	breast:
43	chr9:104493214..104495968-chr9:104498085..104500159,2	K562	blood:
44	chr9:104472870..104474526-chr9:104475820..104477413,2	K562	blood:
45	chr9:104733654..104735932-chr9:104741852..104744249,2	K562	blood:
46	chr9:104618154..104619898-chr9:104623303..104626288,2	K562	blood:
47	chr9:104707981..104710743-chr9:104711149..104712879,2	K562	blood:
48	chr9:104752145..104755127-chr9:104756633..104759561,2	MCF-7	breast:
49	chr9:104719927..104722291-chr9:104723715..104725489,2	K562	blood:
50	chr9:104707981..104710743-chr9:104711149..104712879,2	K562	blood:

(count:7 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-RNF20-4	chr9:104567769-104567808	NONHSAT133752
2	lnc-RNF20-2	chr9:104654473-104654712	XLOC_007493
3	lnc-RNF20-4	chr9:104567913-104568131	NONHSAT133752
4	lnc-C9orf107-7	chr9:104811295-104811420	NONHSAT133754
5	lnc-RNF20-2	chr9:104652669-104652689	XLOC_007493
6	lnc-C9orf107-7	chr9:104810504-104810756	NONHSAT133754
7	lnc-GRIN3A-2	chr9:104817534-104818023	NONHSAT133755

No data

Variant related genes	Relation type
ARL2BPP7	TF binding region
MTND3P4	TF binding region
GRIN3A	TF binding region
ARL2BPP7	CpG island
MTND3P4	CpG island
GRIN3A	CpG island
ENSG00000270982	chromatin interactions

Extended variants
information (count: 7111 )
Associated
traits (count: 71 )

Variant overlapped rSNPs/rCNVs (count:7111 , 50 per page) page: 1 2 3 4 5 6 7 ... 143

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs10521058	chr9:104450624-104450625	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs545699467	chr9:104450638-104450639	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs145842822	chr9:104450664-104450665	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs566846202	chr9:104450682-104450683	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs186056410	chr9:104450693-104450694	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs192162009	chr9:104450716-104450717	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs567313818	chr9:104450736-104450737	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs6479060	chr9:104450751-104450752	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
9	rs549920473	chr9:104450778-104450779	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs574795755	chr9:104450817-104450818	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs183931939	chr9:104450850-104450851	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs569729876	chr9:104450879-104450880	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs188485014	chr9:104450931-104450932	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs538481705	chr9:104450932-104450933	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs75613148	chr9:104450933-104450934	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs558421301	chr9:104450969-104450970	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs565686737	chr9:104450986-104450987	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs149595746	chr9:104450998-104450999	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs553891428	chr9:104451078-104451079	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs183033826	chr9:104451093-104451094	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs542730672	chr9:104451094-104451095	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs186954147	chr9:104451097-104451098	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs191800573	chr9:104451169-104451170	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs376457046	chr9:104451176-104451177	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs545664508	chr9:104451202-104451203	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs10512286	chr9:104451238-104451239	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
27	rs528000970	chr9:104451242-104451243	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs184344107	chr9:104451284-104451285	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs560744367	chr9:104451301-104451302	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs529723365	chr9:104451311-104451312	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs2485534	chr9:104451338-104451339	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
32	rs2485535	chr9:104451498-104451499	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
33	rs532174990	chr9:104451589-104451590	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs2485536	chr9:104451640-104451641	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
35	rs575983181	chr9:104451647-104451648	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs543200720	chr9:104451648-104451649	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs565600992	chr9:104451668-104451669	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs539060137	chr9:104451698-104451699	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs534623262	chr9:104451703-104451704	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs146622033	chr9:104451719-104451720	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs187649137	chr9:104451728-104451729	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs536689639	chr9:104451789-104451790	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs2485537	chr9:104451820-104451821	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
44	rs368492612	chr9:104451858-104451859	Enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs193212957	chr9:104451865-104451866	Enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs573737670	chr9:104451957-104451958	Enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs539194783	chr9:104451998-104451999	Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs573107877	chr9:104452011-104452012	Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs201001843	chr9:104452025-104452026	Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs66879645	chr9:104452026-104452027	Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:71)

Disease	PMID	Source
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Chordoma	21602918	CNVD
Renal cell carcinoma	18592004	CNVD
Developmental delay	19490664	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
Medulloblastoma	21979893	CNVD
microdeletion syndrome	16199537	CNVD
Ovarian cancer	21720365	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Cancer	20164919	CNVD
Urothelial carcinoma	21177765	CNVD
Renal cell carcinoma	21668985	CNVD
Autism	22495311	CNVD
Melanoma	18172304	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Cancer	16751803	CNVD
Myelofibrosis	22110671	CNVD
lymphocytic leukemia	21291569	CNVD
Leukemia	17361228	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Glioblastoma	16823260	CNVD
Leukemia	18688285	CNVD
Non-small cell lung cancer	21044232	CNVD
Brain cancer	20823417	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Astrocytoma	17387387	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Renal cell carcinoma	19461508	CNVD
Neuroblastoma	18923191	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Heart disease	21282601	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Lung cancer	18438408	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Acute myeloid leukemia	21251322	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Breast cancer	17603634	CNVD
Acute myeloid leukemia	20729466	CNVD
Oral cancer	21386901	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Prostate cancer	18632612	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Gastric cancer	17908304	CNVD
Gastrointestinal stromal cancer	20877625	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
small cell lung cancer	20016488	CNVD
Cardiac fibroma	18329553	CNVD
Breast cancer	17133270	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
T-cell acute lymphoblastic leukemia	19406988	CNVD
Fukuyama congenital muscular dystrophy	21572526	CNVD
Testicular germ cell tumor	18059402	CNVD
Acute lymphoblastic leukemia	18458336	CNVD
Mantle cell lymphoma	19029149	CNVD
Intracranial aneurysm	16715129	CNVD
Neuroblastoma	20406844	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Schizophrenia	23813976	CNVD
early-passage human iPS cells	21368824	CNVD

Chromatin state (count:776 , 50 per page) page: 1 2 3 4 5 6 7 ... 16

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:104446400-104451200	Weak transcription	Fetal Lung	lung
2	chr9:104446400-104451800	Weak transcription	Fetal Brain Male	brain
3	chr9:104451200-104452200	Enhancers	Fetal Lung	lung
4	chr9:104451800-104452200	Enhancers	Fetal Brain Male	brain
5	chr9:104454000-104454600	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
6	chr9:104454000-104454800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
7	chr9:104454600-104454800	Enhancers	Psoas Muscle	Psoas
8	chr9:104454600-104455000	Enhancers	Monocytes-CD14+_RO01746	blood
9	chr9:104454600-104455200	Enhancers	Fetal Heart	heart
10	chr9:104454600-104456200	Enhancers	Primary monocytes fromperipheralblood	blood
11	chr9:104454800-104455000	Enhancers	Adipose Nuclei	Adipose
12	chr9:104454800-104455200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
13	chr9:104454800-104459400	Weak transcription	Psoas Muscle	Psoas
14	chr9:104455000-104455400	Weak transcription	Monocytes-CD14+_RO01746	blood
15	chr9:104455000-104455600	Weak transcription	Adipose Nuclei	Adipose
16	chr9:104455200-104455600	Weak transcription	Fetal Heart	heart
17	chr9:104455200-104457000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
18	chr9:104455400-104456400	Enhancers	Monocytes-CD14+_RO01746	blood
19	chr9:104455600-104456400	Enhancers	Adipose Nuclei	Adipose
20	chr9:104455600-104457200	Enhancers	Fetal Heart	heart
21	chr9:104457200-104458200	Weak transcription	Fetal Heart	heart
22	chr9:104458200-104458800	Enhancers	Fetal Heart	heart
23	chr9:104459000-104467200	Weak transcription	Liver	Liver
24	chr9:104464200-104464400	Enhancers	Placenta Amnion	Placenta Amnion
25	chr9:104465000-104465200	Enhancers	Placenta Amnion	Placenta Amnion
26	chr9:104465000-104467200	Enhancers	Rectal Mucosa Donor 31	rectum
27	chr9:104465200-104465400	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
28	chr9:104465400-104465800	Enhancers	Fetal Muscle Leg	muscle
29	chr9:104465400-104465800	Enhancers	Rectal Mucosa Donor 29	rectum
30	chr9:104465400-104466800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
31	chr9:104465800-104466800	Weak transcription	Fetal Muscle Leg	muscle
32	chr9:104465800-104467200	Weak transcription	Rectal Mucosa Donor 29	rectum
33	chr9:104466800-104467000	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
34	chr9:104466800-104467000	Enhancers	Fetal Muscle Trunk	muscle
35	chr9:104466800-104467000	Enhancers	Fetal Muscle Leg	muscle
36	chr9:104466800-104467200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
37	chr9:104466800-104467200	Enhancers	Duodenum Mucosa	Duodenum
38	chr9:104466800-104467400	Enhancers	Fetal Lung	lung
39	chr9:104467000-104467200	Enhancers	HUES48 Cell Line	embryonic stem cell
40	chr9:104467000-104467200	Bivalent Enhancer	Fetal Muscle Leg	muscle
41	chr9:104467000-104467400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
42	chr9:104467200-104467400	Bivalent Enhancer	ES-I3 Cell Line	embryonic stem cell
43	chr9:104467200-104467400	Bivalent Enhancer	HUES6 Cell Line	embryonic stem cell
44	chr9:104467200-104467400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
45	chr9:104467200-104467400	Enhancers	Primary mononuclear cells fromperipheralblood	Blood
46	chr9:104467200-104467400	Enhancers	Liver	Liver
47	chr9:104467200-104467400	Enhancers	Pancreas	Pancrea
48	chr9:104467200-104467600	Active TSS	H1 Cell Line	embryonic stem cell
49	chr9:104467200-104467600	Flanking Active TSS	HUES48 Cell Line	embryonic stem cell
50	chr9:104467200-104467600	Active TSS	iPS-20b Cell Line	embryonic stem cell

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