Variant report

Variant nsv1049949
Chromosome Location chr12:9008609-9049198
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:261 , 50 per page) page: 1 2 3 4 5 6
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:8982200-9022000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr12:8983400-9017600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
3 chr12:8987600-9040000 Weak transcription H1 Cell Line embryonic stem cell
4 chr12:8987800-9012800 Weak transcription HUES48 Cell Line embryonic stem cell
5 chr12:8988200-9012800 Weak transcription ES-I3 Cell Line embryonic stem cell
6 chr12:8994800-9016600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr12:8996000-9040000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
8 chr12:8998800-9014600 Weak transcription Right Atrium heart
9 chr12:8999000-9016400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
10 chr12:9000800-9012400 Weak transcription Placenta Amnion Placenta Amnion
11 chr12:9001200-9010200 Weak transcription iPS-15b Cell Line embryonic stem cell
12 chr12:9001200-9011600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr12:9005000-9013400 Weak transcription Brain Anterior Caudate brain
14 chr12:9005200-9017800 Weak transcription HUES6 Cell Line embryonic stem cell
15 chr12:9007000-9029600 Weak transcription H9 Cell Line embryonic stem cell
16 chr12:9007200-9027600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
17 chr12:9007400-9009600 Weak transcription Esophagus oesophagus
18 chr12:9008000-9009200 Enhancers K562 blood
19 chr12:9008000-9011400 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
20 chr12:9008200-9009400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
21 chr12:9008400-9009200 Enhancers Primary hematopoietic stem cells blood
22 chr12:9008400-9009200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
23 chr12:9008400-9009200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
24 chr12:9008400-9009200 Enhancers Cortex derived primary cultured neurospheres brain
25 chr12:9008600-9008800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
26 chr12:9008600-9009000 Enhancers Primary hematopoietic stem cells short term culture blood
27 chr12:9008800-9009000 Enhancers Brain Dorsolateral Prefrontal Cortex brain
28 chr12:9009000-9011200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
29 chr12:9009200-9012800 Weak transcription K562 blood
30 chr12:9009600-9012600 Strong transcription Esophagus oesophagus
31 chr12:9010200-9011400 Strong transcription iPS-15b Cell Line embryonic stem cell
32 chr12:9011400-9011800 Genic enhancers ES-UCSF4 Cell Line embryonic stem cell
33 chr12:9011400-9012800 Weak transcription iPS-15b Cell Line embryonic stem cell
34 chr12:9011600-9011800 Genic enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
35 chr12:9011800-9021600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
36 chr12:9011800-9029800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
37 chr12:9012600-9020400 Weak transcription Esophagus oesophagus
38 chr12:9012800-9013600 Enhancers HUES48 Cell Line embryonic stem cell
39 chr12:9012800-9013600 Enhancers K562 blood
40 chr12:9012800-9013800 Enhancers ES-I3 Cell Line embryonic stem cell
41 chr12:9013000-9013400 Enhancers Placenta Placenta
42 chr12:9013000-9013800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
43 chr12:9013400-9013600 Enhancers Brain Anterior Caudate brain
44 chr12:9013400-9013600 Enhancers Spleen Spleen
45 chr12:9013600-9019200 Weak transcription K562 blood
46 chr12:9013600-9029400 Weak transcription HUES48 Cell Line embryonic stem cell
47 chr12:9013800-9033800 Weak transcription ES-I3 Cell Line embryonic stem cell
48 chr12:9016400-9016600 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
49 chr12:9016400-9016600 Enhancers Gastric stomach
50 chr12:9019200-9019800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived

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