Variant report

Variant	nsv1050473
Chromosome Location	chr15:58479888-58562270
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1785)
CpG islands
(count:428)
Chromatin interactive
region (count:67)
LncRNA
region (count:19)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1785 , 50 per page) page: 1 2 3 4 5 6 7 ... 36

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr15:58495768-58496124	K562	blood:	n/a	n/a
2	ARID3A	chr15:58505066-58505527	K562	blood:	n/a	n/a
3	ARID3A	chr15:58481416-58481549	K562	blood:	n/a	n/a
4	ARID3A	chr15:58505087-58505435	HepG2	liver:	n/a	n/a
5	ARID3A	chr15:58562136-58562529	HepG2	liver:	n/a	n/a
6	ATF1	chr15:58514892-58515271	K562	blood:	n/a	n/a
7	ATF1	chr15:58541837-58542139	K562	blood:	n/a	n/a
8	ATF1	chr15:58495748-58496112	K562	blood:	n/a	n/a
9	ATF1	chr15:58562243-58562505	K562	blood:	n/a	n/a
10	ATF2	chr15:58562174-58562521	H1-hESC	embryonic stem cell:	n/a	n/a
11	ATF3	chr15:58525572-58525823	K562	blood:	n/a	n/a
12	ATF3	chr15:58495720-58496028	K562	blood:	n/a	n/a
13	BACH1	chr15:58495705-58496032	K562	blood:	n/a	n/a
14	BCLAF1	chr15:58519976-58520226	GM12878	blood:	n/a	n/a
15	BCLAF1	chr15:58519861-58520311	GM12878	blood:	n/a	n/a
16	BHLHE40	chr15:58538685-58538846	K562	blood:	n/a	n/a
17	BHLHE40	chr15:58535240-58535566	K562	blood:	n/a	n/a
18	BHLHE40	chr15:58495748-58496097	K562	blood:	n/a	n/a
19	BHLHE40	chr15:58481398-58481609	K562	blood:	n/a	n/a
20	BHLHE40	chr15:58515003-58515178	K562	blood:	n/a	n/a
21	BHLHE40	chr15:58492948-58493214	K562	blood:	n/a	n/a
22	BHLHE40	chr15:58538594-58538794	HepG2	liver:	n/a	n/a
23	BHLHE40	chr15:58505116-58505389	K562	blood:	n/a	n/a
24	BHLHE40	chr15:58513878-58514132	K562	blood:	n/a	n/a
25	BHLHE40	chr15:58524553-58524786	K562	blood:	n/a	n/a
26	BRCA1	chr15:58559372-58559700	Hela-S3	cervix:	n/a	n/a
27	BRCA1	chr15:58540422-58540596	Hela-S3	cervix:	n/a	n/a
28	BRCA1	chr15:58552861-58553491	Hela-S3	cervix:	n/a	n/a
29	CBX3	chr15:58481267-58481692	K562	blood:	n/a	n/a
30	CCNT2	chr15:58481241-58481441	K562	blood:	n/a	n/a
31	CCNT2	chr15:58515011-58515211	K562	blood:	n/a	n/a
32	CCNT2	chr15:58541802-58542178	K562	blood:	n/a	n/a
33	CCNT2	chr15:58495434-58496123	K562	blood:	n/a	n/a
34	CEBPB	chr15:58536042-58536292	HepG2	liver:	n/a	chr15:58536198-58536207 chr15:58536196-58536207 chr15:58536196-58536209
35	CEBPB	chr15:58506192-58506548	K562	blood:	n/a	chr15:58506368-58506379
36	CEBPB	chr15:58552578-58553640	Hela-S3	cervix:	n/a	n/a
37	CEBPB	chr15:58540450-58540698	HepG2	liver:	n/a	chr15:58540605-58540616 chr15:58540505-58540514 chr15:58540605-58540618 chr15:58540607-58540616 chr15:58540606-58540617 chr15:58540605-58540618
38	CEBPB	chr15:58536087-58536338	IMR90	lung:	n/a	chr15:58536198-58536207 chr15:58536196-58536207 chr15:58536196-58536209
39	CEBPB	chr15:58525597-58525910	K562	blood:	n/a	chr15:58525756-58525769 chr15:58525757-58525768
40	CEBPB	chr15:58540430-58540753	ECC-1	luminal epithelium:	n/a	chr15:58540605-58540616 chr15:58540505-58540514 chr15:58540605-58540618 chr15:58540607-58540616 chr15:58540606-58540617 chr15:58540605-58540618
41	CEBPB	chr15:58515660-58515998	IMR90	lung:	n/a	chr15:58515822-58515839 chr15:58515824-58515835 chr15:58515823-58515834 chr15:58515823-58515836
42	CEBPB	chr15:58495707-58496018	Hela-S3	cervix:	n/a	n/a
43	CEBPB	chr15:58525660-58525845	K562	blood:	n/a	chr15:58525756-58525769 chr15:58525757-58525768
44	CEBPB	chr15:58520977-58521361	IMR90	lung:	n/a	n/a
45	CEBPB	chr15:58540486-58540728	K562	blood:	n/a	chr15:58540605-58540616 chr15:58540505-58540514 chr15:58540605-58540618 chr15:58540607-58540616 chr15:58540606-58540617 chr15:58540605-58540618
46	CEBPB	chr15:58505321-58505560	HepG2	liver:	n/a	n/a
47	CEBPB	chr15:58556857-58557160	H1-hESC	embryonic stem cell:	n/a	chr15:58556995-58557012 chr15:58556998-58557009 chr15:58556998-58557011
48	CEBPB	chr15:58556850-58557191	K562	blood:	n/a	chr15:58556995-58557012 chr15:58556998-58557009 chr15:58556998-58557011
49	CEBPB	chr15:58535428-58535625	K562	blood:	n/a	n/a
50	CEBPB	chr15:58540115-58540782	A549	lung:	n/a	chr15:58540605-58540616 chr15:58540505-58540514 chr15:58540605-58540618 chr15:58540607-58540616 chr15:58540606-58540617 chr15:58540605-58540618

(count:428 , 50 per page) page: 1 2 3 4 5 6 7 ... 9

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr15:58553983-58554033	NB4	blood:	n/a
2	chr15:58553983-58554033	NB4	blood:	n/a
3	chr15:58553983-58554033	HAEpiC	amniotic membrane:	n/a
4	chr15:58540402-58540452	H1-hESC	embryonic stem cell:	embryo
5	chr15:58552619-58552669	NHBE	bronchial:	n/a
6	chr15:58519704-58519754	IMR90	lung:	fetal
7	chr15:58540402-58540452	GM19239	blood:	n/a
8	chr15:58519704-58519754	SK-N-SH_RA	brain:	n/a
9	chr15:58552619-58552669	Hepatocyte	liver:	n/a
10	chr15:58515544-58515594	ovcar-3	ovarian:	n/a
11	chr15:58496278-58496328	HUVEC	blood vessel:	n/a
12	chr15:58553983-58554033	ECC-1	luminal epithelium:	n/a
13	chr15:58515544-58515594	AG04449	skin:	fetal
14	chr15:58515544-58515594	HEK293	kidney:	embryo
15	chr15:58515544-58515594	GM12891	blood:	n/a
16	chr15:58552619-58552669	ProgFib	skin:	n/a
17	chr15:58521438-58521488	HepG2	liver:	n/a
18	chr15:58521438-58521488	ovcar-3	ovarian:	n/a
19	chr15:58521438-58521488	HIPEpiC	eye:	n/a
20	chr15:58496278-58496328	HEK293	kidney:	embryo
21	chr15:58515544-58515594	K562	blood:	n/a
22	chr15:58496278-58496328	AG04450	lung:	fetal
23	chr15:58515544-58515594	HIPEpiC	eye:	n/a
24	chr15:58519704-58519754	A549	lung:	n/a
25	chr15:58519704-58519754	AoSMC	blood vessel:	n/a
26	chr15:58540402-58540452	SKMC	muscle:	n/a
27	chr15:58540402-58540452	MCF10A-Er-Src	breast:	n/a
28	chr15:58552619-58552669	GM12878	blood:	n/a
29	chr15:58540402-58540452	RPTEC	kidney:	n/a
30	chr15:58496278-58496328	GM12892	blood:	n/a
31	chr15:58515544-58515594	GM19239	blood:	n/a
32	chr15:58515544-58515594	SK-N-SH_RA	brain:	n/a
33	chr15:58521438-58521488	IMR90	lung:	fetal
34	chr15:58540402-58540452	NHBE	bronchial:	n/a
35	chr15:58521438-58521488	H1-hESC	embryonic stem cell:	embryo
36	chr15:58552619-58552669	MCF-7	breast:	n/a
37	chr15:58519704-58519754	HCM	heart:	n/a
38	chr15:58519704-58519754	LNCaP	prostate:	n/a
39	chr15:58496278-58496328	AG04449	skin:	fetal
40	chr15:58519704-58519754	BE2_C	brain:	n/a
41	chr15:58552619-58552669	HEEpiC	esophagus:	n/a
42	chr15:58552619-58552669	HEK293	kidney:	embryo
43	chr15:58521438-58521488	T-47D	breast:	n/a
44	chr15:58515544-58515594	HRCEpiC	kidney:	n/a
45	chr15:58519704-58519754	HIPEpiC	eye:	n/a
46	chr15:58521438-58521488	CMK	blood:	n/a
47	chr15:58496278-58496328	PrEC	prostate:	n/a
48	chr15:58515544-58515594	HEEpiC	esophagus:	n/a
49	chr15:58553983-58554033	T-47D	breast:	n/a
50	chr15:58540402-58540452	ProgFib	skin:	n/a

(count:67 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr15:58558694..58560584-chr15:58661911..58664219,2	K562	blood:
2	chr15:58559923..58562292-chr15:58623046..58626671,3	K562	blood:
3	chr15:58505288..58505802-chr15:59820824..59821742,2	K562	blood:
4	chr15:57853056..57853844-chr15:58513573..58514501,2	K562	blood:
5	chr15:58355281..58357769-chr15:58504795..58507676,2	K562	blood:
6	chr15:58534212..58537129-chr15:59060905..59062769,2	K562	blood:
7	chr15:58504905..58505726-chr15:58513648..58514433,4	MCF-7	breast:
8	chr15:58519596..58520483-chr15:59049894..59051015,4	MCF-7	breast:
9	chr15:58481646..58483822-chr15:58485314..58486838,2	K562	blood:
10	chr15:58516526..58518271-chr15:58524056..58526534,2	K562	blood:
11	chr15:58407482..58408061-chr15:58513659..58514466,2	MCF-7	breast:
12	chr15:58505987..58508184-chr15:59784928..59787328,2	K562	blood:
13	chr15:58544783..58547690-chr15:58549680..58551722,2	K562	blood:
14	chr15:58519770..58521503-chr15:58715577..58717727,2	K562	blood:
15	chr15:58540767..58543419-chr15:58550091..58552048,2	K562	blood:
16	chr15:58524274..58525988-chr15:58623095..58624851,2	K562	blood:
17	chr15:58504810..58506580-chr15:59063444..59065345,2	K562	blood:
18	chr15:58520038..58520592-chr15:59249453..59250225,3	K562	blood:
19	chr15:58480797..58483752-chr15:58496881..58499713,2	K562	blood:
20	chr15:58519681..58521503-chr15:59041156..59042988,2	MCF-7	breast:
21	chr15:58504304..58505276-chr15:58513365..58514203,2	MCF-7	breast:
22	chr15:58505038..58505764-chr15:58519727..58520416,2	K562	blood:
23	chr15:58540620..58543105-chr15:58543383..58546142,2	K562	blood:
24	chr15:58480797..58483752-chr15:58496881..58499713,2	K562	blood:
25	chr1:224301667..224302272-chr15:58548314..58548814,2	MCF-7	breast:
26	chr15:58479445..58483146-chr15:58484303..58486814,3	K562	blood:
27	chr15:58536983..58538802-chr15:58544796..58547035,2	K562	blood:
28	chr15:58520072..58520665-chr15:59050085..59050929,2	MCF-7	breast:
29	chr15:58553979..58557970-chr15:58560575..58563562,3	K562	blood:
30	chr15:58555185..58557970-chr15:58559475..58563925,5	K562	blood:
31	chr15:58477664..58478358-chr15:58513555..58514482,3	MCF-7	breast:
32	chr15:58518773..58521484-chr15:59062953..59065044,2	MCF-7	breast:
33	chr15:58304704..58306626-chr15:58479372..58481388,2	K562	blood:
34	chr15:58369177..58370015-chr15:58513534..58514314,2	K562	blood:
35	chr15:58504835..58508448-chr15:58511770..58515596,3	K562	blood:
36	chr15:58480377..58482794-chr15:58490469..58493336,2	K562	blood:
37	chr15:58358218..58360333-chr15:58503772..58505301,2	K562	blood:
38	chr15:58513464..58515183-chr15:58519032..58521453,2	K562	blood:
39	chr15:58559095..58562120-chr15:58564838..58568362,3	K562	blood:
40	chr15:58471240..58473438-chr15:58477636..58480344,3	K562	blood:
41	chr15:58520576..58522119-chr15:58624457..58626342,2	K562	blood:
42	chr15:58261244..58261767-chr15:58513997..58514512,2	K562	blood:
43	chr15:58555185..58557970-chr15:58559475..58563925,5	K562	blood:
44	chr15:58505175..58505781-chr15:59784803..59785341,3	K562	blood:
45	chr15:58518633..58520407-chr15:58624416..58626222,2	K562	blood:
46	chr15:58540620..58543105-chr15:58543383..58546142,2	K562	blood:
47	chr15:58559736..58562598-chr15:58575137..58576771,2	K562	blood:
48	chr15:58559923..58562196-chr15:58623046..58625257,2	K562	blood:
49	chr15:58505038..58505764-chr15:58519727..58520416,2	K562	blood:
50	chr15:58513464..58515183-chr15:58519032..58521453,2	K562	blood:

(count:19 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-AQP9-3	chr15:58536452-58536790	NONHSAT044102
2	lnc-ADAM10-9	chr15:58538334-58538464	NONHSAT140242
3	lnc-AQP9-3	chr15:58534317-58534402	NONHSAT044102
4	lnc-ADAM10-9	chr15:58538334-58538501	NONHSAT044103
5	lnc-ADAM10-9	chr15:58549625-58549747	NONHSAT044103
6	lnc-ADAM10-9	chr15:58551029-58551250	NONHSAT044105
7	lnc-AQP9-2	chr15:58492805-58493217	NONHSAT044101
8	lnc-ADAM10-9	chr15:58549625-58549754	NONHSAT044105
9	lnc-ADAM10-9	chr15:58534096-58534194	NONHSAT044103
10	lnc-ADAM10-9	chr15:58550341-58550438	NONHSAT044107
11	lnc-ADAM10-9	chr15:58538382-58538501	NONHSAT044104
12	lnc-ADAM10-9	chr15:58517813-58517970	NONHSAT044089
13	lnc-ADAM10-9	chr15:58550341-58550438	NONHSAT044105
14	lnc-AQP9-4	chr15:58558672-58558889	ucscGeneNc_uc002ags_1
15	lnc-ADAM10-9	chr15:58538382-58538501	NONHSAT044105
16	lnc-ADAM10-9	chr15:58549647-58549754	NONHSAT044107
17	lnc-ADAM10-9	chr15:58549647-58549754	NONHSAT044106
18	lnc-AQP9-3	chr15:58518063-58518150	NONHSAT044102
19	lnc-ADAM10-9	chr15:58534099-58534194	NONHSAT140242

No data

Variant related genes	Relation type
ENSG00000240934	TF binding region
ALDH1A2	TF binding region
ENSG00000240934	CpG island
ALDH1A2	CpG island
ENSG00000245975	chromatin interactions
ENSG00000259285	chromatin interactions
ENSG00000261219	chromatin interactions
ENSG00000128918	chromatin interactions
ENSG00000240934	chromatin interactions
ENSG00000137845	chromatin interactions
ENSG00000128923	chromatin interactions
ENSG00000143756	chromatin interactions

Extended variants
information (count: 3761 )
Associated
traits (count: 62 )

Variant overlapped rSNPs/rCNVs (count:3761 , 50 per page) page: 1 2 3 4 5 6 7 ... 76

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs186333408	chr15:58479909-58479910	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
2	rs191579898	chr15:58479913-58479914	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
3	rs17240657	chr15:58479960-58479961	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
4	rs181543366	chr15:58479964-58479965	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
5	rs566079231	chr15:58480000-58480001	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
6	rs552194275	chr15:58480056-58480057	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
7	rs565635300	chr15:58480059-58480060	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
8	rs138598798	chr15:58480066-58480067	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
9	rs142774685	chr15:58480078-58480079	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
10	rs4775020	chr15:58480095-58480096	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
11	rs537123726	chr15:58480128-58480129	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
12	rs74016597	chr15:58480134-58480135	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
13	rs117824386	chr15:58480174-58480175	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
14	rs539428871	chr15:58480184-58480185	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
15	rs79535141	chr15:58480206-58480207	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
16	rs572754060	chr15:58480209-58480210	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
17	rs1711060	chr15:58480223-58480224	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
18	rs55832939	chr15:58480233-58480234	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
19	rs78084376	chr15:58480249-58480250	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
20	rs558581378	chr15:58480252-58480253	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
21	rs144489296	chr15:58480274-58480275	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
22	rs4775021	chr15:58480283-58480284	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
23	rs377474181	chr15:58480300-58480301	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
24	rs199959566	chr15:58480303-58480304	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
25	rs34457834	chr15:58480304-58480305	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
26	rs56740033	chr15:58480307-58480308	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
27	rs552130948	chr15:58480321-58480322	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
28	rs368213514	chr15:58480345-58480346	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
29	rs113560319	chr15:58480408-58480409	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
30	rs186183922	chr15:58480427-58480428	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
31	rs386784413	chr15:58480464-58480465	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
32	rs7176545	chr15:58480465-58480466	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
33	rs536865389	chr15:58480471-58480472	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
34	rs34120436	chr15:58480473-58480474	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
35	rs386383127	chr15:58480474-58480475	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
36	rs199575571	chr15:58480477-58480478	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
37	rs539743379	chr15:58480478-58480479	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
38	rs386364519	chr15:58480479-58480480	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
39	rs539567693	chr15:58480550-58480551	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
40	rs552987196	chr15:58480561-58480562	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
41	rs572891210	chr15:58480566-58480567	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
42	rs16939909	chr15:58480569-58480570	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
43	rs148463314	chr15:58480610-58480611	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
44	rs564620215	chr15:58480629-58480630	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
45	rs187692503	chr15:58480654-58480655	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
46	rs141747249	chr15:58480732-58480733	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
47	rs563935094	chr15:58480734-58480735	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
48	rs576913204	chr15:58480735-58480736	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
49	rs545909920	chr15:58480737-58480738	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
50	rs73410579	chr15:58480760-58480761	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a

Variant related diseases (count:62)

Disease	PMID	Source
Ewing''s sarcoma	21437220	CNVD
Schizophrenia	19415332	CNVD
Breast cancer	22522925	CNVD
Autism	22495311	CNVD
Wilms tumour	21544195	CNVD
Testicular germ cell tumor	18059402	CNVD
cataract	16735990	CNVD
Cancer	21637783	CNVD
Colorectal cancer	20709793	CNVD
Medulloblastoma	21979893	CNVD
spastic paraplegia with thinning of corpus callosum	19105190	CNVD
Schizophrenia	21324950	CNVD
Astrocytoma	17387387	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Disease	21824424	CNVD
Melanoma	18172304	CNVD
Colorectal cancer	16774939	CNVD
Gastric cancer	17167181	CNVD
Neuroblastoma	19435921	CNVD
Colorectal cancer	19359472	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Colorectal cancer	16272173	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Multiple myeloma	17550852	CNVD
Intellectual disability	22102821	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute myeloid leukemia	20729466	CNVD
Prostate cancer	16573809	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Multiple myeloma	20724749	CNVD
Lung cancer	18438408	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Prostate cancer	18632612	CNVD
small cell lung cancer	20016488	CNVD
Basal cell lymphoma	17053054	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Cancer	21129771	CNVD
Breast cancer	16272173	CNVD
Hepatocellular carcinoma	16750200	CNVD
Abnormal phenotypes	18644119	CNVD
Cancer	16751803	CNVD
Esophageal adenocarcinoma	18820669	CNVD
Gastrointestinal stromal cancer	20818650	CNVD
Acute monocytic leukemia	16498392	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Breast cancer	17133270	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Non-syndromic sensorineural hearing loss	18496225	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Congenital diaphragmatic hernia	21341218	CNVD
Holoprosencephaly	21359414	CNVD
Myelofibrosis	22110671	CNVD
Adenocarcinoma	19607727	CNVD
Squamous cell cancer	19607727	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Pancreatic cancer	17952125	CNVD

Chromatin state (count:1013 , 50 per page) page: 1 2 3 4 5 6 7 ... 21

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:58451200-58481000	Strong transcription	Primary neutrophils fromperipheralblood	blood
2	chr15:58471600-58481200	Weak transcription	Right Atrium	heart
3	chr15:58475200-58481000	Weak transcription	K562	blood
4	chr15:58478400-58481400	Weak transcription	GM12878-XiMat	blood
5	chr15:58478800-58483800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
6	chr15:58480800-58482600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
7	chr15:58481000-58481600	Enhancers	K562	blood
8	chr15:58481000-58482800	Weak transcription	Primary neutrophils fromperipheralblood	blood
9	chr15:58481600-58481800	Enhancers	GM12878-XiMat	blood
10	chr15:58481600-58485800	Weak transcription	K562	blood
11	chr15:58482400-58483200	Enhancers	HMEC	breast
12	chr15:58482600-58483000	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
13	chr15:58482600-58483000	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
14	chr15:58482600-58483200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
15	chr15:58482600-58483200	Enhancers	NHEK	skin
16	chr15:58485000-58485200	Enhancers	iPS-20b Cell Line	embryonic stem cell
17	chr15:58485600-58486200	Enhancers	HUES6 Cell Line	embryonic stem cell
18	chr15:58485600-58486200	Bivalent/Poised TSS	A549	lung
19	chr15:58485800-58486000	Flanking Active TSS	HepG2	liver
20	chr15:58485800-58486200	Enhancers	Placenta	Placenta
21	chr15:58492000-58493000	Weak transcription	Pancreas	Pancrea
22	chr15:58492800-58493000	Active TSS	H1 Derived Mesenchymal Stem Cells	ES cell derived
23	chr15:58492800-58493000	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
24	chr15:58492800-58493200	ZNF genes & repeats	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
25	chr15:58492800-58493200	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
26	chr15:58492800-58494000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
27	chr15:58492800-58494800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
28	chr15:58492800-58497800	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
29	chr15:58492800-58498400	Enhancers	NHDF-Ad	bronchial
30	chr15:58493000-58493200	Flanking Active TSS	H1 Derived Mesenchymal Stem Cells	ES cell derived
31	chr15:58493000-58493200	Enhancers	Pancreas	Pancrea
32	chr15:58493000-58493200	Enhancers	K562	blood
33	chr15:58493000-58495200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
34	chr15:58493200-58493600	Enhancers	Brain Hippocampus Middle	brain
35	chr15:58493200-58493800	Enhancers	Brain Inferior Temporal Lobe	brain
36	chr15:58493200-58493800	Enhancers	Fetal Brain Male	brain
37	chr15:58493200-58495400	Weak transcription	K562	blood
38	chr15:58493400-58493600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
39	chr15:58493400-58493600	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
40	chr15:58493400-58493800	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
41	chr15:58493400-58494000	Enhancers	Brain Germinal Matrix	brain
42	chr15:58493400-58494200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
43	chr15:58493400-58494200	Enhancers	Osteobl	bone
44	chr15:58493400-58494400	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
45	chr15:58493400-58496600	Enhancers	HUVEC	blood vessel
46	chr15:58493400-58497000	Enhancers	Muscle Satellite Cultured Cells	--
47	chr15:58493400-58497400	Enhancers	NHLF	lung
48	chr15:58493600-58493800	Enhancers	Adipose Nuclei	Adipose
49	chr15:58493600-58495400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
50	chr15:58493600-58496800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin

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