Variant report

Variant nsv1051524
Chromosome Location chr12:41409977-41643387
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:794 , 50 per page) page: 1 2 3 4 5 6 7 ... 16
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:41405200-41429800 Weak transcription Brain Inferior Temporal Lobe brain
2 chr12:41405400-41417600 Weak transcription Brain Cingulate Gyrus brain
3 chr12:41405600-41423000 Weak transcription Ovary ovary
4 chr12:41407000-41425200 Weak transcription Brain Angular Gyrus brain
5 chr12:41408000-41413000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
6 chr12:41408200-41426400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
7 chr12:41408200-41449800 Weak transcription Brain Anterior Caudate brain
8 chr12:41408400-41421400 Weak transcription Breast Myoepithelial Primary Cells Breast
9 chr12:41408800-41428000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
10 chr12:41409000-41435000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
11 chr12:41409600-41416800 Weak transcription A549 lung
12 chr12:41410000-41424800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr12:41413000-41413600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
14 chr12:41413600-41416400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
15 chr12:41416400-41417400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
16 chr12:41417000-41427400 Weak transcription Fetal Lung lung
17 chr12:41417200-41417800 Enhancers Cortex derived primary cultured neurospheres brain
18 chr12:41417600-41417800 Enhancers Aorta Aorta
19 chr12:41417600-41418000 Enhancers Brain Cingulate Gyrus brain
20 chr12:41417800-41423000 Weak transcription Aorta Aorta
21 chr12:41418000-41424600 Weak transcription Brain Cingulate Gyrus brain
22 chr12:41418600-41422800 Weak transcription Brain Substantia Nigra brain
23 chr12:41419600-41422200 Weak transcription Brain Hippocampus Middle brain
24 chr12:41421000-41423600 Weak transcription Fetal Kidney kidney
25 chr12:41421400-41421800 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
26 chr12:41421800-41426200 Weak transcription Breast Myoepithelial Primary Cells Breast
27 chr12:41422800-41423000 Active TSS Brain Substantia Nigra brain
28 chr12:41422800-41423200 ZNF genes & repeats Fetal Brain Male brain
29 chr12:41423000-41423200 Enhancers Aorta Aorta
30 chr12:41426000-41426600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
31 chr12:41426000-41426800 Enhancers Placenta Placenta
32 chr12:41426200-41426600 Enhancers Breast Myoepithelial Primary Cells Breast
33 chr12:41428000-41429000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
34 chr12:41428200-41429200 Enhancers NHEK skin
35 chr12:41428600-41428800 Enhancers Colon Smooth Muscle Colon
36 chr12:41428600-41428800 Enhancers Rectal Smooth Muscle rectum
37 chr12:41428600-41429000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
38 chr12:41428600-41429000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
39 chr12:41428600-41429200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
40 chr12:41428800-41429400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
41 chr12:41428800-41430000 Weak transcription Colon Smooth Muscle Colon
42 chr12:41429000-41469600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
43 chr12:41430000-41430800 Enhancers Colon Smooth Muscle Colon
44 chr12:41435800-41446000 Weak transcription Brain Inferior Temporal Lobe brain
45 chr12:41438200-41439800 Enhancers Rectal Smooth Muscle rectum
46 chr12:41438200-41445800 Weak transcription A549 lung
47 chr12:41438400-41439800 Enhancers Colon Smooth Muscle Colon
48 chr12:41439200-41439800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
49 chr12:41439800-41442800 Weak transcription Colon Smooth Muscle Colon
50 chr12:41439800-41446000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow

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