No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs17238458 |
chr12:49048506-49048507 |
Strong transcription Weak transcription
|
TF binding regionCpG islandChromatin interactive region
|
2 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
2 |
rs78989778 |
chr12:49048533-49048534 |
Strong transcription Weak transcription
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
3 |
rs74693075 |
chr12:49048534-49048535 |
Strong transcription Weak transcription
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
4 |
rs553838883 |
chr12:49048583-49048584 |
Strong transcription Weak transcription
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
5 |
rs139236103 |
chr12:49048602-49048603 |
Strong transcription Weak transcription
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
6 |
rs545853662 |
chr12:49048653-49048654 |
Strong transcription Weak transcription
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
7 |
rs553792341 |
chr12:49048663-49048664 |
Strong transcription Weak transcription
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
8 |
rs572108198 |
chr12:49048669-49048670 |
Strong transcription Weak transcription
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
9 |
rs371113486 |
chr12:49048702-49048703 |
Strong transcription Weak transcription
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
10 |
rs374488532 |
chr12:49048731-49048732 |
Strong transcription Weak transcription
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
11 |
rs188565949 |
chr12:49048733-49048734 |
Strong transcription Weak transcription
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
12 |
rs3741628 |
chr12:49048738-49048739 |
Strong transcription Weak transcription
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
13 |
rs191760160 |
chr12:49048757-49048758 |
Strong transcription Weak transcription
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
14 |
rs184048897 |
chr12:49048781-49048782 |
Strong transcription Weak transcription
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
15 |
rs529908395 |
chr12:49048841-49048842 |
Strong transcription Weak transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
16 |
rs540480648 |
chr12:49048855-49048856 |
Strong transcription Weak transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
17 |
rs374093731 |
chr12:49048861-49048862 |
Strong transcription Weak transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
18 |
rs374159623 |
chr12:49048866-49048867 |
Strong transcription Weak transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
19 |
rs368081073 |
chr12:49048875-49048876 |
Strong transcription Weak transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
20 |
rs532268354 |
chr12:49048896-49048897 |
Strong transcription Weak transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
21 |
rs552003382 |
chr12:49048939-49048940 |
Strong transcription Weak transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
22 |
rs576425547 |
chr12:49048950-49048951 |
Strong transcription Weak transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
23 |
rs200583816 |
chr12:49048964-49048965 |
Strong transcription Weak transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
24 |
rs6580690 |
chr12:49048985-49048986 |
Strong transcription Weak transcription
|
Chromatin interactive region
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
25 |
rs531209624 |
chr12:49049010-49049011 |
Strong transcription Weak transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
26 |
rs116615200 |
chr12:49049013-49049014 |
Strong transcription Weak transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
27 |
rs568454710 |
chr12:49049047-49049048 |
Strong transcription Weak transcription
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
28 |
rs561684401 |
chr12:49049108-49049109 |
Strong transcription Weak transcription
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
29 |
rs534121140 |
chr12:49049117-49049118 |
Strong transcription Weak transcription
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
30 |
rs554370591 |
chr12:49049118-49049119 |
Strong transcription Weak transcription
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
31 |
rs571710332 |
chr12:49049123-49049124 |
Strong transcription Weak transcription
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
32 |
rs539884457 |
chr12:49049127-49049128 |
Strong transcription Weak transcription
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
33 |
rs542281413 |
chr12:49049212-49049213 |
Strong transcription Weak transcription
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
34 |
rs59304927 |
chr12:49049213-49049214 |
Strong transcription Weak transcription
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
35 |
rs560671405 |
chr12:49049214-49049215 |
Strong transcription Weak transcription
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
36 |
rs200332389 |
chr12:49049351-49049352 |
Strong transcription Weak transcription
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
37 |
rs78886616 |
chr12:49049353-49049354 |
Strong transcription Weak transcription
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
38 |
rs57078760 |
chr12:49049365-49049366 |
Strong transcription Weak transcription
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
39 |
rs7484753 |
chr12:49049368-49049369 |
Strong transcription Weak transcription
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
40 |
rs114820475 |
chr12:49049401-49049402 |
Strong transcription Weak transcription
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
41 |
rs187619634 |
chr12:49049421-49049422 |
Strong transcription Weak transcription
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
42 |
rs561087007 |
chr12:49049428-49049429 |
Strong transcription Weak transcription
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
43 |
rs371230661 |
chr12:49049432-49049433 |
Strong transcription Weak transcription
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
44 |
rs540414619 |
chr12:49049476-49049477 |
Strong transcription Weak transcription
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
45 |
rs190431872 |
chr12:49049520-49049521 |
Strong transcription Weak transcription
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
46 |
rs560259459 |
chr12:49049537-49049538 |
Strong transcription Weak transcription
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
47 |
rs528180108 |
chr12:49049595-49049596 |
Strong transcription Weak transcription
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
48 |
rs576986040 |
chr12:49049598-49049599 |
Strong transcription Weak transcription
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
49 |
rs531334251 |
chr12:49049610-49049611 |
Strong transcription Weak transcription
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
50 |
rs115594702 |
chr12:49049665-49049666 |
Strong transcription Weak transcription
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|