Variant report

Variant	nsv1052277
Chromosome Location	chr15:34776550-35033073
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:3759)
CpG islands
(count:2871)
Chromatin interactive
region (count:134)
LncRNA
region (count:28)
Mature miRNA
region (count: 2)
miRNA target
sites (count:2)

(count:3759 , 50 per page) page: 1 2 3 4 5 6 7 ... 76

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr15:34880209-34880840	HepG2	liver:	n/a	n/a
2	ARID3A	chr15:34886706-34886742	K562	blood:	n/a	n/a
3	ARID3A	chr15:34915270-34915290	K562	blood:	n/a	n/a
4	ARID3A	chr15:34875226-34875237	K562	blood:	n/a	n/a
5	ARID3A	chr15:34989159-34989187	K562	blood:	n/a	n/a
6	ARID3A	chr15:34946314-34948129	K562	blood:	n/a	n/a
7	ARID3A	chr15:34949658-34950365	K562	blood:	n/a	n/a
8	ARID3A	chr15:34869965-34870045	HepG2	liver:	n/a	n/a
9	ARID3A	chr15:34944080-34945342	K562	blood:	n/a	n/a
10	ARID3A	chr15:34929245-34929276	K562	blood:	n/a	n/a
11	ARID3A	chr15:35000570-35000896	K562	blood:	n/a	n/a
12	ARID3A	chr15:34908827-34909205	K562	blood:	n/a	n/a
13	ARID3A	chr15:34905532-34905838	K562	blood:	n/a	n/a
14	ARID3A	chr15:34954510-34955719	K562	blood:	n/a	n/a
15	ARID3A	chr15:34880295-34880915	K562	blood:	n/a	n/a
16	ARID3A	chr15:34913827-34914853	K562	blood:	n/a	chr15:34914367-34914383 chr15:34914368-34914384
17	ARID3A	chr15:34902659-34902943	K562	blood:	n/a	n/a
18	ARID3A	chr15:34952157-34952158	K562	blood:	n/a	n/a
19	ARID3A	chr15:34939172-34940883	K562	blood:	n/a	n/a
20	ARID3A	chr15:34948740-34948973	K562	blood:	n/a	n/a
21	ARID3A	chr15:34953056-34953951	K562	blood:	n/a	n/a
22	ARID3A	chr15:34781246-34781587	K562	blood:	n/a	n/a
23	ARID3A	chr15:34916436-34916602	K562	blood:	n/a	n/a
24	ATF1	chr15:34807442-34807640	K562	blood:	n/a	n/a
25	ATF1	chr15:35019827-35019831	K562	blood:	n/a	n/a
26	ATF1	chr15:34947575-34947975	K562	blood:	n/a	n/a
27	ATF1	chr15:34936394-34936711	K562	blood:	n/a	n/a
28	ATF1	chr15:34946741-34947211	K562	blood:	n/a	n/a
29	ATF1	chr15:34940100-34940799	K562	blood:	n/a	n/a
30	ATF1	chr15:34905714-34905797	K562	blood:	n/a	n/a
31	ATF1	chr15:34913992-34914213	K562	blood:	n/a	n/a
32	ATF1	chr15:34949656-34950320	K562	blood:	n/a	n/a
33	ATF1	chr15:34944877-34945255	K562	blood:	n/a	n/a
34	ATF1	chr15:35006704-35007397	K562	blood:	n/a	n/a
35	ATF1	chr15:34880295-34880819	K562	blood:	n/a	n/a
36	ATF1	chr15:34908847-34909148	K562	blood:	n/a	n/a
37	ATF1	chr15:35000572-35001097	K562	blood:	n/a	n/a
38	ATF1	chr15:34870112-34870339	K562	blood:	n/a	n/a
39	ATF1	chr15:34985696-34985896	K562	blood:	n/a	n/a
40	ATF1	chr15:34808283-34808324	K562	blood:	n/a	n/a
41	ATF1	chr15:34896856-34896884	K562	blood:	n/a	n/a
42	ATF2	chr15:34942304-34942739	GM12878	blood:	n/a	n/a
43	ATF2	chr15:34880485-34880875	H1-hESC	embryonic stem cell:	n/a	n/a
44	ATF2	chr15:34880089-34880894	GM12878	blood:	n/a	n/a
45	ATF2	chr15:34880257-34880906	GM12878	blood:	n/a	n/a
46	ATF2	chr15:34942319-34942566	GM12878	blood:	n/a	n/a
47	ATF3	chr15:34781262-34781502	K562	blood:	n/a	n/a
48	ATF3	chr15:34908811-34909131	K562	blood:	n/a	n/a
49	BACH1	chr15:34876822-34876846	K562	blood:	n/a	n/a
50	BACH1	chr15:34949732-34950003	K562	blood:	n/a	n/a

(count:2871 , 50 per page) page: 1 2 3 4 5 6 7 ... 58

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr15:34875937-34875987	SAEC	small airway:	n/a
2	chr15:34782820-34782870	SKMC	muscle:	n/a
3	chr15:35017944-35017994	HPAEpiC	pulmonary alveolar:	n/a
4	chr15:34875250-34875300	BJ	skin:	n/a
5	chr15:34875937-34875987	SAEC	small airway:	n/a
6	chr15:34782820-34782870	SKMC	muscle:	n/a
7	chr15:35017944-35017994	HPAEpiC	pulmonary alveolar:	n/a
8	chr15:34875250-34875300	BJ	skin:	n/a
9	chr15:34817982-34818032	SK-N-MC	brain:	n/a
10	chr15:34875891-34875941	HCT-116	colon:	n/a
11	chr15:34817982-34818032	HEK293	kidney:	embryo
12	chr15:34876283-34876333	NHBE	bronchial:	n/a
13	chr15:34806349-34806399	AG04449	skin:	fetal
14	chr15:35017944-35017994	IMR90	lung:	fetal
15	chr15:34782167-34782217	GM19239	blood:	n/a
16	chr15:34875250-34875300	HAEpiC	amniotic membrane:	n/a
17	chr15:34875945-34875995	HEEpiC	esophagus:	n/a
18	chr15:34807050-34807100	AG04449	skin:	fetal
19	chr15:34807679-34807729	Jurkat	blood:	n/a
20	chr15:34875138-34875188	PFSK-1	brain:	n/a
21	chr15:34781969-34782019	HCM	heart:	n/a
22	chr15:34782167-34782217	HepG2	liver:	n/a
23	chr15:34781705-34781755	Hela-S3	cervix:	n/a
24	chr15:34876283-34876333	GM12891	blood:	n/a
25	chr15:34875825-34875875	MCF10A-Er-Src	breast:	n/a
26	chr15:35001084-35001134	SK-N-SH	brain:	n/a
27	chr15:34791564-34791614	AG09319	gingival:	n/a
28	chr15:34806810-34806860	K562	blood:	n/a
29	chr15:34875117-34875167	Hepatocyte	liver:	n/a
30	chr15:34787400-34787450	HEEpiC	esophagus:	n/a
31	chr15:34874183-34874233	HIPEpiC	eye:	n/a
32	chr15:34876471-34876521	SK-N-SH	brain:	n/a
33	chr15:34807221-34807271	NB4	blood:	n/a
34	chr15:34807679-34807729	T-47D	breast:	n/a
35	chr15:34874862-34874912	HMEC	breast:	n/a
36	chr15:34787920-34787970	SAEC	small airway:	n/a
37	chr15:34876295-34876345	GM12878	blood:	n/a
38	chr15:34787420-34787470	HNPCEpiC	eye:	n/a
39	chr15:34817982-34818032	HCT-116	colon:	n/a
40	chr15:34781969-34782019	AG09319	gingival:	n/a
41	chr15:34874183-34874233	ovcar-3	ovarian:	n/a
42	chr15:34782167-34782217	NT2-D1	testis:	n/a
43	chr15:34787400-34787450	U87	brain:	n/a
44	chr15:34807221-34807271	NH-A	brain:	n/a
45	chr15:34988869-34988919	Caco-2	colon:	n/a
46	chr15:34807143-34807193	SK-N-SH	brain:	n/a
47	chr15:34817982-34818032	AG10803	skin:	n/a
48	chr15:34806810-34806860	GM12892	blood:	n/a
49	chr15:34875825-34875875	HEK293	kidney:	embryo
50	chr15:35014270-35014320	HPAEpiC	pulmonary alveolar:	n/a

(count:134 , 50 per page) page: 1 2 3

No.	Distal block	Cell Line	Cell type
1	chr15:35012152..35014532-chr15:35016625..35018343,2	MCF-7	breast:
2	chr15:34949722..34952645-chr15:34986997..34989606,2	K562	blood:
3	chr15:34983650..34987345-chr15:34990001..34992979,4	K562	blood:
4	chr15:34913751..34914597-chr15:35212096..35212867,7	K562	blood:
5	chr15:34983650..34987842-chr15:34989482..34992979,5	K562	blood:
6	chr15:35005516..35008329-chr15:35009732..35011993,2	K562	blood:
7	chr15:34988822..34991429-chr15:34996883..34999400,2	K562	blood:
8	chr15:34941344..34943269-chr15:34977002..34979213,2	K562	blood:
9	chr15:34927785..34933151-chr15:34934497..34941490,8	K562	blood:
10	chr15:34790196..34793794-chr15:34794467..34797662,3	K562	blood:
11	chr15:34892499..34894333-chr15:34896967..34899231,2	K562	blood:
12	chr15:34980841..34982732-chr15:34984201..34987180,2	K562	blood:
13	chr15:35010787..35013754-chr15:35014491..35016542,2	K562	blood:
14	chr15:34658214..34660711-chr15:34806608..34809602,2	K562	blood:
15	chr15:34962423..34964134-chr15:34966956..34969710,3	K562	blood:
16	chr15:34997005..34998827-chr15:34999088..35001652,2	K562	blood:
17	chr15:35005516..35008329-chr15:35009732..35011993,2	K562	blood:
18	chr15:34953069..34954628-chr15:34955083..34957176,2	K562	blood:
19	chr15:34867657..34871070-chr15:34876144..34878325,3	K562	blood:
20	chr15:34937548..34939695-chr15:34950801..34953012,2	K562	blood:
21	chr15:34946410..34947955-chr15:34948303..34950980,2	K562	blood:
22	chr15:34960285..34962774-chr15:34963252..34966258,4	K562	blood:
23	chr15:34949750..34952665-chr15:35241317..35244101,2	K562	blood:
24	chr15:34869058..34871895-chr15:34873883..34875893,3	K562	blood:
25	chr15:34989332..34992979-chr15:34995533..34998034,4	K562	blood:
26	chr15:34963103..34965254-chr15:34966851..34969218,2	MCF-7	breast:
27	chr15:35032021..35034684-chr15:35036681..35039142,3	K562	blood:
28	chr15:35014688..35016306-chr15:35021250..35023169,2	K562	blood:
29	chr15:34963103..34965254-chr15:34966851..34969218,2	MCF-7	breast:
30	chr15:34953069..34954628-chr15:34955083..34957176,2	K562	blood:
31	chr13:92448522..92450690-chr15:34895323..34897374,2	K562	blood:
32	chr15:35001097..35003090-chr15:35007070..35008790,2	K562	blood:
33	chr15:34728587..34731061-chr15:34780506..34783189,3	K562	blood:
34	chr15:34960754..34962321-chr15:34966390..34968165,2	K562	blood:
35	chr15:34913918..34914531-chr15:35212584..35213285,2	MCF-7	breast:
36	chr15:34960285..34962774-chr15:34963252..34966258,4	K562	blood:
37	chr15:34898803..34900649-chr15:34905656..34908079,2	K562	blood:
38	chr10:75006642..75007633-chr15:35013735..35014638,2	Hela-S3	cervix:
39	chr15:34949722..34952645-chr15:34986997..34989606,2	K562	blood:
40	chr15:34879223..34881623-chr15:34893177..34895546,2	K562	blood:
41	chr15:34727885..34731466-chr15:34878887..34881950,4	K562	blood:
42	chr15:34913307..34914991-chr15:34929235..34931577,2	K562	blood:
43	chr15:34769198..34772919-chr15:34774454..34777192,3	K562	blood:
44	chr15:34898803..34900649-chr15:34905656..34908079,2	K562	blood:
45	chr15:35029315..35031883-chr15:35048194..35050280,2	K562	blood:
46	chr15:34983713..34985317-chr6:26197593..26200143,2	K562	blood:
47	chr15:35010787..35013754-chr15:35014491..35016542,2	K562	blood:
48	chr15:34664329..34667047-chr15:34894143..34895743,2	MCF-7	breast:
49	chr15:35001097..35003090-chr15:35007070..35008790,2	K562	blood:
50	chr15:34513565..34517614-chr15:34877827..34881077,3	K562	blood:

(count:28 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-GJD2-3	chr15:34874951-34875061	NONHSAT041597
2	lnc-GJD2-4	chr15:34845946-34846157	NONHSAT041596
3	lnc-GJD2-4	chr15:34875717-34875835	NONHSAT041596
4	lnc-GJD2-4	chr15:34873667-34873700	NONHSAT140232
5	lnc-AC114546.1-4	chr15:35014395-35014438	NONHSAT041604
6	lnc-GOLGA8A-1	chr15:34946499-34946618	ENSG00000261304.1
7	lnc-GOLGA8A-1	chr15:34943936-34946139	ucscGeneNc_uc001zji_1
8	lnc-GOLGA8A-1	chr15:34947820-34947965	ENSG00000261304.1
9	lnc-GJD2-2	chr15:34972962-34973170	uc_385_-
10	lnc-GOLGA8A-1	chr15:34943885-34943977	ENSG00000261304.1
11	lnc-AC114546.1-4	chr15:35014273-35014438	XLOC_011205
12	lnc-GJD2-4	chr15:34845096-34845292	NONHSAT140232
13	lnc-GJD2-4	chr15:34845174-34845292	NONHSAT041596
14	lnc-GJD2-1	chr15:35012518-35012708	XLOC_011422
15	lnc-GOLGA8A-1	chr15:34947820-34947978	XLOC_011421
16	lnc-GOLGA8A-1	chr15:34962302-34962370	XLOC_011421
17	lnc-GJD2-3	chr15:34858091-34858674	NONHSAT041597
18	lnc-GJD2-4	chr15:34845946-34846157	NONHSAT140232
19	lnc-AC114546.1-4	chr15:35015809-35016397	NONHSAT041604
20	lnc-AC114546.1-4	chr15:35015735-35016108	XLOC_011205
21	lnc-GJD2-1	chr15:34967556-34967834	XLOC_011422
22	lnc-AC114546.1-13	chr15:34972962-34973170	uc_385_+
23	lnc-AC114546.1-12	chr15:34988228-34988460	NONHSAT041602
24	lnc-GJD2-4	chr15:34843392-34843477	NONHSAT140232
25	lnc-AC114546.1-12	chr15:34982173-34982277	NONHSAT041602
26	lnc-GOLGA8A-1	chr15:34948237-34948332	ucscGeneNc_uc001zji_1
27	lnc-GOLGA8A-1	chr15:34943336-34943463	ENSG00000261304.1
28	lnc-GJD2-4	chr15:34867026-34867115	NONHSAT041596

miRNA name	Chromosome Location	mirBase accession
hsa-miR-1233-5p	chr15:34820548-34820569	MIMAT0022943_1
hsa-miR-1233-3p	chr15:34820491-34820510	MIMAT0005588_1

(count:2 , 50 per page) page: 1

No.	miRNA target gene	miRNA name	Chromosome Location	mirBase accession
1	GOLGA8B	hsa-miR-32-5p	chr15:34818291-34818311
2	GOLGA8B	hsa-miR-15a-5p	chr15:34817527-34817548

Variant related genes	Relation type
ENSG00000261304	TF binding region
ENSG00000261559	TF binding region
MIR1233-2	TF binding region
ENSG00000259892	TF binding region
GOLGA8A	TF binding region
HNRNPLP2	TF binding region
ENSG00000252425	TF binding region
GOLGA8B	TF binding region
ENSG00000261304	CpG island
ENSG00000261559	CpG island
MIR1233-2	CpG island
ENSG00000259892	CpG island
GOLGA8A	CpG island
HNRNPLP2	CpG island
ENSG00000252425	CpG island
GOLGA8B	CpG island
ENSG00000176454	chromatin interactions
ENSG00000215252	chromatin interactions
ENSG00000140199	chromatin interactions
ENSG00000182117	chromatin interactions
ENSG00000198146	chromatin interactions
ENSG00000236756	chromatin interactions
ENSG00000259904	chromatin interactions
ENSG00000175265	chromatin interactions
ENSG00000196866	chromatin interactions
ENSG00000266205	chromatin interactions
ENSG00000261304	chromatin interactions
ENSG00000197409	chromatin interactions
ENSG00000075618	chromatin interactions
ENSG00000128463	chromatin interactions
ENSG00000169857	chromatin interactions
ENSG00000197846	chromatin interactions
NEK9	miRNA target sites
NEK7	miRNA target sites

Extended variants
information (count: 8201 )
Associated
traits (count: 70 )

Variant overlapped rSNPs/rCNVs (count:8201 , 50 per page) page: 1 2 3 4 5 6 7 ... 165

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs191738016	chr15:34780422-34780423	Active TSS	n/a	n/a	Overlapped CNVs	n/a
2	rs115930720	chr15:34780434-34780435	Active TSS	n/a	n/a	Overlapped CNVs	n/a
3	rs549237101	chr15:34780456-34780457	Active TSS	n/a	n/a	Overlapped CNVs	n/a
4	rs201243428	chr15:34780616-34780617	Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
5	rs567716461	chr15:34780624-34780625	Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
6	rs116239882	chr15:34780728-34780729	Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
7	rs34214518	chr15:34780741-34780742	Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
8	rs13379674	chr15:34780764-34780765	Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
9	rs112268530	chr15:34780779-34780780	Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
10	rs546307675	chr15:34780783-34780784	Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
11	rs553962878	chr15:34780799-34780800	Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
12	rs565879109	chr15:34780826-34780827	Bivalent/Poised TSS Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
13	rs3841236	chr15:34780854-34780855	Bivalent/Poised TSS Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
14	rs386782918	chr15:34780896-34780897	Bivalent/Poised TSS Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
15	rs2114261	chr15:34780907-34780908	Bivalent/Poised TSS Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
16	rs542953688	chr15:34780923-34780924	Bivalent/Poised TSS Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
17	rs57674188	chr15:34780943-34780944	Bivalent/Poised TSS Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
18	rs397957218	chr15:34780952-34780953	Bivalent/Poised TSS Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
19	rs58443601	chr15:34780967-34780968	Bivalent/Poised TSS Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
20	rs397957219	chr15:34780974-34780975	Bivalent/Poised TSS Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
21	rs369560971	chr15:34780975-34780976	Bivalent/Poised TSS Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
22	rs543379985	chr15:34780995-34780996	Bivalent/Poised TSS Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
23	rs116841301	chr15:34781001-34781002	Active TSS Bivalent/Poised TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
24	rs573639107	chr15:34781009-34781010	Active TSS Bivalent/Poised TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
25	rs183547495	chr15:34781032-34781033	Active TSS Bivalent/Poised TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
26	rs57048834	chr15:34781043-34781044	Active TSS Bivalent/Poised TSS	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
27	rs201083253	chr15:34781074-34781075	Active TSS Bivalent/Poised TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
28	rs545939490	chr15:34781089-34781090	Active TSS Bivalent/Poised TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
29	rs549813457	chr15:34781091-34781092	Active TSS Bivalent/Poised TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
30	rs59650720	chr15:34781095-34781096	Active TSS Bivalent/Poised TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
31	rs577807356	chr15:34781126-34781127	Active TSS Bivalent/Poised TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
32	rs143421193	chr15:34781145-34781146	Active TSS Bivalent/Poised TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
33	rs112451697	chr15:34781165-34781166	Active TSS Bivalent/Poised TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
34	rs563985518	chr15:34781180-34781181	Active TSS Bivalent/Poised TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
35	rs2554763	chr15:34781203-34781204	Active TSS Bivalent/Poised TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
36	rs185752947	chr15:34781223-34781224	Active TSS Bivalent/Poised TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
37	rs2554764	chr15:34781224-34781225	Active TSS Bivalent/Poised TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
38	rs2554765	chr15:34781238-34781239	Active TSS Bivalent/Poised TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
39	rs113309437	chr15:34781260-34781261	Active TSS Bivalent/Poised TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
40	rs3812939	chr15:34781272-34781273	Active TSS Bivalent/Poised TSS	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
41	rs190074893	chr15:34781289-34781290	Active TSS Bivalent/Poised TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
42	rs182302011	chr15:34781311-34781312	Active TSS Bivalent/Poised TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
43	rs565918797	chr15:34781362-34781363	Active TSS Bivalent/Poised TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
44	rs559322282	chr15:34781372-34781373	Active TSS Bivalent/Poised TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
45	rs551724375	chr15:34781410-34781411	Active TSS Bivalent/Poised TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
46	rs569896267	chr15:34781464-34781465	Active TSS Bivalent/Poised TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
47	rs536649281	chr15:34781503-34781504	Active TSS Bivalent/Poised TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
48	rs529993743	chr15:34781640-34781641	Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
49	rs556675714	chr15:34781649-34781650	Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
50	rs111585003	chr15:34781712-34781713	Flanking Active TSS	TF binding region CpG island Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:70)

Disease	PMID	Source
HDAC8	0	CNVD
NIPBL	0	CNVD
RAD21	0	CNVD
SMC1A	0	CNVD
SMC3	0	CNVD
Ewing''s sarcoma	21437220	CNVD
Schizophrenia	19415332	CNVD
Breast cancer	22522925	CNVD
Autism	22495311	CNVD
Wilms tumour	21544195	CNVD
Angelman syndrome	16183798	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Testicular germ cell tumor	18059402	CNVD
cataract	16735990	CNVD
Cancer	21637783	CNVD
Colorectal cancer	20709793	CNVD
Medulloblastoma	21979893	CNVD
spastic paraplegia with thinning of corpus callosum	19105190	CNVD
Schizophrenia	21324950	CNVD
Astrocytoma	17387387	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Disease	21824424	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Melanoma	18172304	CNVD
Colorectal cancer	16774939	CNVD
Gastric cancer	17167181	CNVD
Neuroblastoma	19435921	CNVD
Colorectal cancer	19359472	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Colorectal cancer	16272173	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Multiple myeloma	17550852	CNVD
Intellectual disability	22102821	CNVD
Hodgkin''s lymphoma	17606441	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute myeloid leukemia	20729466	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Breast cancer	17133270	CNVD
Prostate cancer	16573809	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Multiple myeloma	20724749	CNVD
Lung cancer	18438408	CNVD
Breast cancer	21858162	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Breast cancer	21785460	CNVD
Abnormal corpus callosum	21572526	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Autism	19204725	CNVD
Schizophrenia	19204725	CNVD
Schizophrenia	19149910	CNVD
Ovarian cancer	22174824	CNVD
Prostate cancer	18632612	CNVD
small cell lung cancer	20016488	CNVD
Legius syndrome	19443465	CNVD
Holoprosencephaly	21359414	CNVD
Myelofibrosis	22110671	CNVD
Glioblastoma multiforme	22286061	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Prader-willi syndrome	21504564	CNVD
Cancer	17440070	CNVD
Basal cell lymphoma	17053054	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD
Acute lymphoblastic leukemia	18458336	CNVD
lymphocytic leukemia	21291569	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Pancreatic cancer	17952125	CNVD

Chromatin state (count:2438 , 50 per page) page: 1 2 3 4 5 6 7 ... 49

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:34780400-34781600	Active TSS	K562	blood
2	chr15:34780800-34781600	Bivalent/Poised TSS	A549	lung
3	chr15:34781000-34781600	Active TSS	ES-WA7 Cell Line	embryonic stem cell
4	chr15:34781600-34781800	Flanking Active TSS	K562	blood
5	chr15:34782000-34786600	Weak transcription	Right Ventricle	heart
6	chr15:34782200-34783200	Bivalent/Poised TSS	iPS-15b Cell Line	embryonic stem cell
7	chr15:34782400-34782600	Bivalent Enhancer	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
8	chr15:34782400-34782600	Bivalent Enhancer	Primary T helper cells PMA-I stimulated	--
9	chr15:34782400-34782800	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
10	chr15:34782400-34783000	Active TSS	iPS DF 19.11 Cell Line	embryonic stem cell
11	chr15:34782400-34783200	Bivalent/Poised TSS	H1 Cell Line	embryonic stem cell
12	chr15:34782400-34783200	Active TSS	H9 Cell Line	embryonic stem cell
13	chr15:34782400-34783200	Bivalent/Poised TSS	HUES6 Cell Line	embryonic stem cell
14	chr15:34782400-34783400	Bivalent/Poised TSS	iPS-20b Cell Line	embryonic stem cell
15	chr15:34782600-34783000	Bivalent/Poised TSS	H1 Derived Mesenchymal Stem Cells	ES cell derived
16	chr15:34782600-34783200	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
17	chr15:34782800-34783000	Bivalent/Poised TSS	HUES48 Cell Line	embryonic stem cell
18	chr15:34782800-34783000	Flanking Bivalent TSS/Enh	Foreskin Melanocyte Primary Cells skin03	Skin
19	chr15:34782800-34783000	Bivalent/Poised TSS	HSMM	muscle
20	chr15:34782800-34783200	Bivalent/Poised TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
21	chr15:34782800-34783200	Bivalent/Poised TSS	HUES64 Cell Line	embryonic stem cell
22	chr15:34782800-34783200	Bivalent/Poised TSS	iPS-18 Cell Line	embryonic stem cell
23	chr15:34782800-34783200	Active TSS	ES-UCSF4 Cell Line	embryonic stem cell
24	chr15:34782800-34783200	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
25	chr15:34782800-34783400	Bivalent/Poised TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
26	chr15:34783000-34783200	Flanking Bivalent TSS/Enh	HUES48 Cell Line	embryonic stem cell
27	chr15:34783000-34783200	Bivalent Enhancer	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
28	chr15:34783000-34783200	Bivalent Enhancer	Fetal Heart	heart
29	chr15:34783000-34783400	Bivalent/Poised TSS	ES-WA7 Cell Line	embryonic stem cell
30	chr15:34783000-34783400	Bivalent Enhancer	Fetal Lung	lung
31	chr15:34783200-34783400	Flanking Bivalent TSS/Enh	H1 Cell Line	embryonic stem cell
32	chr15:34783200-34783400	Bivalent Enhancer	HUES48 Cell Line	embryonic stem cell
33	chr15:34783200-34783400	Flanking Bivalent TSS/Enh	HUES6 Cell Line	embryonic stem cell
34	chr15:34783600-34783800	Bivalent/Poised TSS	Primary T cells from cord blood	blood
35	chr15:34784200-34784400	Bivalent/Poised TSS	Primary T cells from cord blood	blood
36	chr15:34786200-34786400	Flanking Bivalent TSS/Enh	HUES48 Cell Line	embryonic stem cell
37	chr15:34786200-34786400	Flanking Bivalent TSS/Enh	iPS-18 Cell Line	embryonic stem cell
38	chr15:34786200-34787000	Bivalent/Poised TSS	HUES6 Cell Line	embryonic stem cell
39	chr15:34786200-34787200	Bivalent/Poised TSS	HUES64 Cell Line	embryonic stem cell
40	chr15:34786200-34787200	Bivalent/Poised TSS	iPS-20b Cell Line	embryonic stem cell
41	chr15:34786400-34786600	Bivalent Enhancer	Primary T killer naive cells fromperipheralblood	blood
42	chr15:34786400-34786600	Bivalent Enhancer	Cortex derived primary cultured neurospheres	brain
43	chr15:34786400-34786600	Bivalent/Poised TSS	Ganglion Eminence derived primary cultured neurospheres	brain
44	chr15:34786400-34786600	Bivalent/Poised TSS	Foreskin Fibroblast Primary Cells skin02	Skin
45	chr15:34786400-34786600	Bivalent Enhancer	Foreskin Melanocyte Primary Cells skin03	Skin
46	chr15:34786400-34786600	Bivalent Enhancer	Brain Cingulate Gyrus	brain
47	chr15:34786400-34786600	Bivalent Enhancer	Brain Hippocampus Middle	brain
48	chr15:34786400-34786600	Enhancers	Pancreas	Pancrea
49	chr15:34786400-34786800	Active TSS	iPS DF 19.11 Cell Line	embryonic stem cell
50	chr15:34786400-34786800	Bivalent Enhancer	Primary hematopoietic stem cells	blood

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