Variant report
Variant | nsv1052577 |
---|---|
Chromosome Location | chr10:42433540-42827991 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:4921)
- CpG islands (count:1953)
- Chromatin interactive region (count:65)
- LncRNA region (count:20)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No. | Transcrition factor | Chromosome Location | Cell Line | Cell type | Cell Stage | Matched TF binding sites |
---|---|---|---|---|---|---|
1 | ARID3A | chr10:42599390-42600242 | K562 | blood: | n/a | n/a |
2 | ARID3A | chr10:42597406-42597416 | K562 | blood: | n/a | n/a |
3 | ARID3A | chr10:42597838-42598531 | K562 | blood: | n/a | n/a |
4 | ARID3A | chr10:42535480-42535514 | HepG2 | liver: | n/a | n/a |
5 | ARID3A | chr10:42799540-42800192 | HepG2 | liver: | n/a | n/a |
6 | ATF1 | chr10:42815222-42815574 | K562 | blood: | n/a | n/a |
7 | ATF1 | chr10:42817203-42817917 | K562 | blood: | n/a | n/a |
8 | ATF1 | chr10:42535479-42535678 | K562 | blood: | n/a | n/a |
9 | ATF1 | chr10:42599330-42600242 | K562 | blood: | n/a | n/a |
10 | ATF1 | chr10:42529120-42532936 | K562 | blood: | n/a | n/a |
11 | ATF1 | chr10:42534553-42534934 | K562 | blood: | n/a | n/a |
12 | ATF1 | chr10:42597833-42598535 | K562 | blood: | n/a | n/a |
13 | ATF1 | chr10:42801380-42801410 | K562 | blood: | n/a | n/a |
14 | ATF1 | chr10:42539003-42539017 | K562 | blood: | n/a | n/a |
15 | ATF1 | chr10:42539718-42539917 | K562 | blood: | n/a | n/a |
16 | ATF1 | chr10:42799538-42800192 | K562 | blood: | n/a | n/a |
17 | ATF1 | chr10:42797113-42797490 | K562 | blood: | n/a | n/a |
18 | ATF3 | chr10:42529049-42531144 | GM12878 | blood: | n/a | n/a |
19 | BACH1 | chr10:42597763-42598620 | K562 | blood: | n/a | n/a |
20 | BACH1 | chr10:42599263-42600248 | K562 | blood: | n/a | n/a |
21 | BACH1 | chr10:42813274-42813746 | K562 | blood: | n/a | n/a |
22 | BATF | chr10:42810326-42810760 | GM12878 | blood: | n/a | n/a |
23 | BATF | chr10:42677087-42677277 | GM12878 | blood: | n/a | n/a |
24 | BATF | chr10:42796760-42798052 | GM12878 | blood: | n/a | n/a |
25 | BATF | chr10:42684572-42684848 | GM12878 | blood: | n/a | n/a |
26 | BATF | chr10:42799184-42800297 | GM12878 | blood: | n/a | n/a |
27 | BATF | chr10:42526972-42530940 | GM12878 | blood: | n/a | n/a |
28 | BATF | chr10:42445154-42445319 | GM12878 | blood: | n/a | n/a |
29 | BATF | chr10:42610090-42610374 | GM12878 | blood: | n/a | n/a |
30 | BATF | chr10:42611063-42611437 | GM12878 | blood: | n/a | n/a |
31 | BATF | chr10:42530952-42531687 | GM12878 | blood: | n/a | n/a |
32 | BATF | chr10:42791867-42792344 | GM12878 | blood: | n/a | n/a |
33 | BATF | chr10:42611560-42611800 | GM12878 | blood: | n/a | n/a |
34 | BATF | chr10:42648114-42648316 | GM12878 | blood: | n/a | n/a |
35 | BATF | chr10:42643277-42643477 | GM12878 | blood: | n/a | n/a |
36 | BATF | chr10:42791008-42791549 | GM12878 | blood: | n/a | n/a |
37 | BATF | chr10:42647665-42647940 | GM12878 | blood: | n/a | n/a |
38 | BATF | chr10:42601164-42601564 | GM12878 | blood: | n/a | n/a |
39 | BATF | chr10:42802384-42802603 | GM12878 | blood: | n/a | n/a |
40 | BATF | chr10:42666434-42667002 | GM12878 | blood: | n/a | n/a |
41 | BATF | chr10:42596620-42600732 | GM12878 | blood: | n/a | n/a |
42 | BATF | chr10:42651846-42652170 | GM12878 | blood: | n/a | n/a |
43 | BATF | chr10:42816795-42818369 | GM12878 | blood: | n/a | n/a |
44 | BATF | chr10:42648105-42648599 | GM12878 | blood: | n/a | n/a |
45 | BATF | chr10:42661385-42662259 | GM12878 | blood: | n/a | n/a |
46 | BATF | chr10:42676274-42676463 | GM12878 | blood: | n/a | n/a |
47 | BATF | chr10:42611144-42611526 | GM12878 | blood: | n/a | n/a |
48 | BATF | chr10:42673852-42674316 | GM12878 | blood: | n/a | n/a |
49 | BATF | chr10:42600759-42601656 | GM12878 | blood: | n/a | n/a |
50 | BATF | chr10:42678782-42679680 | GM12878 | blood: | n/a | n/a |
No. | Chromosome Location | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr10:42737322-42737372 | HEK293 | kidney: | embryo |
2 | chr10:42737322-42737372 | HEK293 | kidney: | embryo |
3 | chr10:42672859-42672909 | GM12878 | blood: | n/a |
4 | chr10:42737322-42737372 | SK-N-MC | brain: | n/a |
5 | chr10:42607194-42607244 | U87 | brain: | n/a |
6 | chr10:42777525-42777575 | Hepatocyte | liver: | n/a |
7 | chr10:42672589-42672639 | H1-hESC | embryonic stem cell: | embryo |
8 | chr10:42777403-42777453 | T-47D | breast: | n/a |
9 | chr10:42672859-42672909 | RPTEC | kidney: | n/a |
10 | chr10:42645466-42645516 | IMR90 | lung: | fetal |
11 | chr10:42738815-42738865 | PrEC | prostate: | n/a |
12 | chr10:42608749-42608799 | Caco-2 | colon: | n/a |
13 | chr10:42673902-42673952 | RPTEC | kidney: | n/a |
14 | chr10:42777525-42777575 | H1-hESC | embryonic stem cell: | embryo |
15 | chr10:42641430-42641480 | AG09309 | skin: | n/a |
16 | chr10:42737139-42737189 | HepG2 | liver: | n/a |
17 | chr10:42633559-42633609 | AG04450 | lung: | fetal |
18 | chr10:42670961-42671011 | ovcar-3 | ovarian: | n/a |
19 | chr10:42777375-42777425 | NHBE | bronchial: | n/a |
20 | chr10:42739066-42739116 | HAEpiC | amniotic membrane: | n/a |
21 | chr10:42633181-42633231 | HEEpiC | esophagus: | n/a |
22 | chr10:42633181-42633231 | HCT-116 | colon: | n/a |
23 | chr10:42777375-42777425 | CMK | blood: | n/a |
24 | chr10:42527519-42527569 | RPTEC | kidney: | n/a |
25 | chr10:42530427-42530477 | RPTEC | kidney: | n/a |
26 | chr10:42646111-42646161 | SK-N-MC | brain: | n/a |
27 | chr10:42607194-42607244 | ECC-1 | luminal epithelium: | n/a |
28 | chr10:42606808-42606858 | NHBE | bronchial: | n/a |
29 | chr10:42777375-42777425 | AG10803 | skin: | n/a |
30 | chr10:42606808-42606858 | HEK293 | kidney: | embryo |
31 | chr10:42745966-42746016 | AG09319 | gingival: | n/a |
32 | chr10:42529747-42529797 | HepG2 | liver: | n/a |
33 | chr10:42530427-42530477 | K562 | blood: | n/a |
34 | chr10:42645466-42645516 | BJ | skin: | n/a |
35 | chr10:42530427-42530477 | A549 | lung: | n/a |
36 | chr10:42527519-42527569 | HAEpiC | amniotic membrane: | n/a |
37 | chr10:42607695-42607745 | AG10803 | skin: | n/a |
38 | chr10:42608749-42608799 | BE2_C | brain: | n/a |
39 | chr10:42670961-42671011 | HMEC | breast: | n/a |
40 | chr10:42646111-42646161 | HL-60 | blood: | n/a |
41 | chr10:42777403-42777453 | AG09309 | skin: | n/a |
42 | chr10:42607194-42607244 | A549 | lung: | n/a |
43 | chr10:42777375-42777425 | NB4 | blood: | n/a |
44 | chr10:42642959-42643009 | GM12892 | blood: | n/a |
45 | chr10:42670961-42671011 | HUVEC | blood vessel: | n/a |
46 | chr10:42607194-42607244 | ProgFib | skin: | n/a |
47 | chr10:42607194-42607244 | SKMC | muscle: | n/a |
48 | chr10:42641430-42641480 | NHDF-neo | bronchial: | n/a |
49 | chr10:42672859-42672909 | HL-60 | blood: | n/a |
50 | chr10:42672589-42672639 | HEK293 | kidney: | embryo |
No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr10:42527395..42527915-chr7:61970565..61971091,3 | MCF-7 | breast: | |
2 | chr10:42530427..42532590-chr8:46977725..46979226,2 | MCF-7 | breast: | |
3 | chr10:42528436..42531081-chr19:27736662..27739367,4 | MCF-7 | breast: | |
4 | chr1:121484248..121485086-chr10:42528519..42529041,2 | MCF-7 | breast: | |
5 | chr1:121484490..121485429-chr10:42530455..42531081,6 | MCF-7 | breast: | |
6 | chr10:42531427..42532425-chr11:19922614..19923134,2 | MCF-7 | breast: | |
7 | chr1:121482838..121485428-chr10:42529461..42532722,10 | K562 | blood: | |
8 | chr1:121483933..121485433-chr10:42530465..42531081,9 | MCF-7 | breast: | |
9 | chr1:121484509..121485410-chr10:42528540..42529041,2 | MCF-7 | breast: | |
10 | chr10:42527395..42527923-chr7:61968860..61969524,4 | MCF-7 | breast: | |
11 | chr10:42532112..42532613-chr19:27734969..27735848,2 | MCF-7 | breast: | |
12 | chr10:42528736..42531443-chr2:73087371..73089045,2 | MCF-7 | breast: | |
13 | chr10:42529282..42529919-chr2:134391577..134392424,2 | MCF-7 | breast: | |
14 | chr10:42526394..42527915-chr7:61967791..61969362,3 | MCF-7 | breast: | |
15 | chr1:121484705..121485362-chr10:42530459..42531081,4 | MCF-7 | breast: | |
16 | chr1:121484020..121484634-chr10:42530561..42531081,2 | MCF-7 | breast: | |
17 | chr10:42525601..42527915-chr7:61967079..61969468,3 | K562 | blood: | |
18 | chr10:42526475..42528192-chr19:27731227..27733212,2 | MCF-7 | breast: | |
19 | chr10:42528075..42531081-chr19:27735905..27739791,6 | MCF-7 | breast: | |
20 | chr1:121484520..121485419-chr10:42530561..42531081,2 | K562 | blood: | |
21 | chr10:42673929..42674445-chr10:43600657..43601190,2 | K562 | blood: | |
22 | chr10:10531872..10532392-chr10:42529084..42529944,2 | MCF-7 | breast: | |
23 | chr1:121484917..121485418-chr10:42529872..42530372,2 | MCF-7 | breast: | |
24 | chr1:121484702..121485223-chr10:42530561..42531081,2 | MCF-7 | breast: | |
25 | chr10:42528106..42531063-chr19:27736683..27739174,2 | K562 | blood: | |
26 | chr1:121482910..121485426-chr10:42527270..42532610,10 | MCF-7 | breast: | |
27 | chr1:121482838..121485428-chr10:42528872..42531081,8 | K562 | blood: | |
28 | chr1:121484906..121485408-chr10:42529869..42530392,2 | MCF-7 | breast: | |
29 | chr1:121482971..121485434-chr10:42543133..42544641,3 | MCF-7 | breast: | |
30 | chr1:224620434..224622448-chr10:42530903..42532481,2 | MCF-7 | breast: | |
31 | chr10:42529302..42529920-chr19:27734982..27735519,2 | MCF-7 | breast: | |
32 | chr10:42528281..42529803-chr7:129794745..129796264,2 | MCF-7 | breast: | |
33 | chr10:42528107..42529933-chr8:110778066..110779566,2 | MCF-7 | breast: | |
34 | chr10:42526395..42527915-chr7:61967791..61969507,5 | MCF-7 | breast: | |
35 | chr10:42398850..42399800-chr10:42529302..42530219,2 | MCF-7 | breast: | |
36 | chr1:121483719..121484637-chr10:42529281..42529801,2 | MCF-7 | breast: | |
37 | chr10:42530126..42531081-chr19:27738662..27739344,3 | MCF-7 | breast: | |
38 | chr10:42528102..42529921-chr12:34831375..34832895,2 | K562 | blood: | |
39 | chr10:42527395..42527915-chr7:61968790..61969454,6 | MCF-7 | breast: | |
40 | chr10:42530145..42531061-chr19:27738673..27739367,3 | MCF-7 | breast: | |
41 | chr10:42398850..42399487-chr10:42529302..42530228,2 | MCF-7 | breast: | |
42 | chr10:42529421..42530247-chr2:12411785..12412750,2 | MCF-7 | breast: | |
43 | chr10:42739123..42739644-chr10:101379768..101380454,2 | HCT-116 | colon: | |
44 | chr10:42673795..42674377-chr10:42765091..42765784,2 | MCF-7 | breast: | |
45 | chr10:42531904..42532590-chr13:98148609..98149589,2 | MCF-7 | breast: | |
46 | chr10:42530231..42530737-chr16:29006682..29007182,2 | MCF-7 | breast: | |
47 | chr10:42528302..42530981-chr19:27731210..27733512,2 | MCF-7 | breast: | |
48 | chr10:42525601..42527915-chr7:61967079..61969278,2 | K562 | blood: | |
49 | chr10:42527520..42529802-chr19:27732626..27735592,2 | K562 | blood: | |
50 | chr10:42529603..42530301-chr17:58166691..58167257,2 | MCF-7 | breast: |
(count:20 , 50 per page) page:
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No. | lncRNA name | Chromosome Location | lncRNA alias |
---|---|---|---|
1 | lnc-CCNYL2-10 | chr10:42501405-42501470 | NONHSAT012851 |
2 | lnc-BMS1-9 | chr10:42686975-42687136 | NONHSAT012855 |
3 | lnc-BMS1-10 | chr10:42529998-42530003 | FPKM1_group_3228_transcript_1 |
4 | lnc-CCNYL2-5 | chr10:42795737-42796013 | NONHSAT012863 |
5 | lnc-BMS1-10 | chr10:42529283-42529832 | FPKM1_group_3228_transcript_1 |
6 | lnc-BMS1-7 | chr10:42737930-42738014 | NONHSAT012859 |
7 | lnc-CCNYL2-5 | chr10:42794471-42794553 | NONHSAT012863 |
8 | lnc-BMS1-9 | chr10:42687963-42689514 | NONHSAT012855 |
9 | lnc-CCNYL2-6 | chr10:42775182-42777267 | NONHSAT012861 |
10 | lnc-CCNYL2-9 | chr10:42596697-42596905 | NONHSAT012853 |
11 | lnc-CCNYL2-5 | chr10:42796822-42796961 | NONHSAT012863 |
12 | lnc-CCNYL2-9 | chr10:42598751-42598801 | NONHSAT012853 |
13 | lnc-CCNYL2-10 | chr10:42489651-42489811 | NONHSAT012851 |
14 | lnc-BMS1-10 | chr10:42529283-42529832 | NONHSAT012852 |
15 | lnc-BMS1-10 | chr10:42529998-42530057 | NONHSAT012852 |
16 | lnc-BMS1-6 | chr10:42791078-42791322 | NONHSAT012862 |
17 | lnc-BMS1-8 | chr10:42705438-42705831 | NONHSAT012856 |
18 | lnc-BMS1-7 | chr10:42746444-42746645 | NONHSAT012859 |
19 | lnc-CCNYL2-10 | chr10:42498812-42498914 | NONHSAT012851 |
20 | lnc-CCNYL2-10 | chr10:42506989-42507177 | NONHSAT012851 |
No data |
No data |
Variant related genes | Relation type |
---|---|
ENSG00000264398 | TF binding region |
KSR1P1 | TF binding region |
IGKV1OR10-1 | TF binding region |
PABPC1P8 | TF binding region |
ENSG00000271650 | TF binding region |
ENSG00000264398 | CpG island |
KSR1P1 | CpG island |
IGKV1OR10-1 | CpG island |
PABPC1P8 | CpG island |
ENSG00000271650 | CpG island |
ENSG00000265345 | chromatin interactions |
ENSG00000143786 | chromatin interactions |
ENSG00000162923 | chromatin interactions |
ENSG00000150991 | chromatin interactions |
ENSG00000128908 | chromatin interactions |
ENSG00000155287 | chromatin interactions |
No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs9703043 | chr10:42433540-42433541 | ZNF genes & repeats | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | mRNA abundance |
2 | rs528533131 | chr10:42433547-42433548 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
3 | rs114978854 | chr10:42433553-42433554 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
4 | rs570131272 | chr10:42433567-42433568 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
5 | rs181543577 | chr10:42433575-42433576 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
6 | rs2335061 | chr10:42433583-42433584 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | mRNA abundance |
7 | rs557139929 | chr10:42433585-42433586 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
8 | rs570514115 | chr10:42433586-42433587 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
9 | rs151234519 | chr10:42433609-42433610 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
10 | rs553142714 | chr10:42433617-42433618 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
11 | rs572870706 | chr10:42433627-42433628 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
12 | rs534270097 | chr10:42433647-42433648 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
13 | rs541835231 | chr10:42433665-42433666 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
14 | rs185967152 | chr10:42433667-42433668 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
15 | rs575101770 | chr10:42433673-42433674 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
16 | rs192232370 | chr10:42433693-42433694 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
17 | rs563552062 | chr10:42433696-42433697 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
18 | rs78439269 | chr10:42433707-42433708 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
19 | rs545891430 | chr10:42433712-42433713 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
20 | rs567166602 | chr10:42433716-42433717 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
21 | rs375298251 | chr10:42433720-42433721 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
22 | rs536216994 | chr10:42433727-42433728 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
23 | rs12267425 | chr10:42433739-42433740 | ZNF genes & repeats | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
24 | rs75461754 | chr10:42433753-42433754 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
25 | rs140704873 | chr10:42433754-42433755 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
26 | rs530835489 | chr10:42433759-42433760 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
27 | rs183954397 | chr10:42433760-42433761 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
28 | rs534970855 | chr10:42433761-42433762 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
29 | rs570649758 | chr10:42433764-42433765 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
30 | rs539689207 | chr10:42433771-42433772 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
31 | rs546693363 | chr10:42433772-42433773 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
32 | rs545118346 | chr10:42433782-42433783 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
33 | rs566580327 | chr10:42433783-42433784 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
34 | rs74204408 | chr10:42433795-42433796 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
35 | rs578104027 | chr10:42442400-42442401 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
36 | rs186487227 | chr10:42442419-42442420 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
37 | rs562651947 | chr10:42442422-42442423 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
38 | rs371582143 | chr10:42442430-42442431 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
39 | rs554384783 | chr10:42442437-42442438 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
40 | rs2878326 | chr10:42442438-42442439 | ZNF genes & repeats | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | mRNA abundance |
41 | rs200154814 | chr10:42442439-42442440 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
42 | rs562527984 | chr10:42442447-42442448 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
43 | rs576040785 | chr10:42442449-42442450 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
44 | rs200773672 | chr10:42442450-42442451 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
45 | rs370017889 | chr10:42442460-42442461 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
46 | rs187098063 | chr10:42442474-42442475 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
47 | rs111458060 | chr10:42442476-42442477 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
48 | rs565035539 | chr10:42442487-42442488 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
49 | rs527439142 | chr10:42442488-42442489 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
50 | rs547268078 | chr10:42442489-42442490 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
Disease | PMID | Source |
---|---|---|
Pancreatic endocrine tumor | 17639061 | CNVD |
Gastric cancer | 17908304 | CNVD |
Chordoma | 21602918 | CNVD |
Ewing''s sarcoma | 21437220 | CNVD |
Glioblastoma multiforme | 21080181 | CNVD |
Medulloblastoma | 21979893 | CNVD |
Melanoma | 18172304 | CNVD |
Pleomorphic xanthoastrocytoma | 20730472 | CNVD |
Lung cancer | 18438408 | CNVD |
Thoracic aortic aneurysm | 21092924 | CNVD |
Ewing''s sarcoma | 17952124 | CNVD |
T-cell prolymphocytic leukemia | 19278963 | CNVD |
Hodgkin''s lymphoma | 17606441 | CNVD |
Acute lymphoblastic leukemia | 20435627 | CNVD |
Acute lymphoblastic leukemia | 20724749 | CNVD |
Autism | 22495311 | CNVD |
Esophageal cancer | 21851588 | CNVD |
Prostate cancer | 18632612 | CNVD |
small cell lung cancer | 20016488 | CNVD |
Breast cancer | 21509527 | CNVD |
Autism | 18414403 | CNVD |
Cockayne syndrome | 18421352 | CNVD |
Glioblastoma | 16823260 | CNVD |
Medulloblastoma | 16968546 | CNVD |
Neuroblastoma | 17533364 | CNVD |
Mental retardation | 21062444 | CNVD |
Cancer | 21183584 | CNVD |
T-cell lymphomas | 19863542 | CNVD |
Testicular germ cell tumor | 18059402 | CNVD |
Squamous cell cancer | 21044232 | CNVD |
Glioma | 21971842 | CNVD |
Cancer | 21637783 | CNVD |
Non-small cell lung cancer | 21044232 | CNVD |
Non-syndromic sensorineural hearing loss | 18471307 | CNVD |
Colorectal cancer | 20709793 | CNVD |
Endometrial cancer | 22040021 | CNVD |
Breast cancer | 21264507 | CNVD |
Esophageal squamous carcinoma | 21637470 | CNVD |
Liposarcoma | 21253554 | CNVD |
Oligodendroglial tumors | 17285580 | CNVD |
Chronic lymphocytic leukemia | 21546498 | CNVD |
Autism | 20858243 | CNVD |
Obesity | 20622171 | CNVD |
Breast cancer | 21364760 | CNVD |
Myelofibrosis | 22110671 | CNVD |
Schizophrenia | 22241247 | CNVD |
Intellectual disability | 21811512 | CNVD |
Papillary thyroid carcinoma | 21436994 | CNVD |
Hirschsprung''s Disease | 21712996 | CNVD |
Non-syndromic sensorineural hearing loss | 15273396 | CNVD |
Obesity | 21956041 | CNVD |
Lung cancer | 21569311 | CNVD |
Non-syndromic sensorineural hearing loss | 17122850 | CNVD |
Renal cell carcinoma | 18765545 | CNVD |
Breast cancer | 21785460 | CNVD |
Ovarian cancer | 21781307 | CNVD |
Pancreatic cancer | 17952125 | CNVD |
Breast cancer | 22522925 | CNVD |
Non-syndromic sensorineural hearing loss | 22037309 | CNVD |
Non-syndromic sensorineural hearing loss | 21293372 | CNVD |
Autism | 20531469 | CNVD |
Congenital anomalies of the kidney and urinary tract | 18316590 | CNVD |
Non-syndromic sensorineural hearing loss | 18451855 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr10:42422800-42433800 | ZNF genes & repeats | HUES64 Cell Line | embryonic stem cell |
2 | chr10:42442400-42443000 | ZNF genes & repeats | Primary hematopoietic stem cells short term culture | blood |
3 | chr10:42442400-42443200 | ZNF genes & repeats | ES-I3 Cell Line | embryonic stem cell |
4 | chr10:42442400-42444000 | ZNF genes & repeats | iPS-18 Cell Line | embryonic stem cell |
5 | chr10:42443400-42448800 | ZNF genes & repeats | HUES48 Cell Line | embryonic stem cell |
6 | chr10:42445000-42448400 | ZNF genes & repeats | HUES64 Cell Line | embryonic stem cell |
7 | chr10:42447800-42449800 | ZNF genes & repeats | Liver | Liver |
8 | chr10:42448000-42458200 | ZNF genes & repeats | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
9 | chr10:42453200-42454600 | ZNF genes & repeats | iPS-20b Cell Line | embryonic stem cell |
10 | chr10:42454000-42456600 | ZNF genes & repeats | Adipose Nuclei | Adipose |
11 | chr10:42454000-42457000 | ZNF genes & repeats | Duodenum Smooth Muscle | Duodenum |
12 | chr10:42458400-42461000 | ZNF genes & repeats | HUES48 Cell Line | embryonic stem cell |
13 | chr10:42460400-42460600 | ZNF genes & repeats | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
14 | chr10:42461600-42463200 | ZNF genes & repeats | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
15 | chr10:42465000-42477400 | ZNF genes & repeats | Liver | Liver |
16 | chr10:42465000-42483000 | ZNF genes & repeats | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
17 | chr10:42465600-42471000 | ZNF genes & repeats | HUES64 Cell Line | embryonic stem cell |
18 | chr10:42465800-42470600 | ZNF genes & repeats | iPS-20b Cell Line | embryonic stem cell |
19 | chr10:42466000-42469200 | ZNF genes & repeats | Adipose Nuclei | Adipose |
20 | chr10:42471200-42476200 | ZNF genes & repeats | HUES48 Cell Line | embryonic stem cell |
21 | chr10:42472200-42484600 | ZNF genes & repeats | Duodenum Smooth Muscle | Duodenum |
22 | chr10:42472400-42479000 | ZNF genes & repeats | Adipose Nuclei | Adipose |
23 | chr10:42472600-42473400 | Active TSS | Right Atrium | heart |
24 | chr10:42473400-42473800 | Active TSS | Aorta | Aorta |
25 | chr10:42474800-42475000 | Bivalent/Poised TSS | Right Atrium | heart |
26 | chr10:42474800-42477600 | ZNF genes & repeats | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
27 | chr10:42478000-42482800 | ZNF genes & repeats | Liver | Liver |
28 | chr10:42480000-42480800 | ZNF genes & repeats | Brain Inferior Temporal Lobe | brain |
29 | chr10:42480200-42483000 | ZNF genes & repeats | HUES48 Cell Line | embryonic stem cell |
30 | chr10:42480200-42484600 | ZNF genes & repeats | Adipose Nuclei | Adipose |
31 | chr10:42491200-42498800 | ZNF genes & repeats | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
32 | chr10:42492000-42492600 | ZNF genes & repeats | HUES64 Cell Line | embryonic stem cell |
33 | chr10:42493800-42495400 | ZNF genes & repeats | Adipose Nuclei | Adipose |
34 | chr10:42497400-42499200 | ZNF genes & repeats | iPS-18 Cell Line | embryonic stem cell |
35 | chr10:42499400-42501800 | ZNF genes & repeats | Liver | Liver |
36 | chr10:42501600-42503000 | ZNF genes & repeats | Adipose Nuclei | Adipose |
37 | chr10:42502400-42523600 | ZNF genes & repeats | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
38 | chr10:42504000-42506200 | ZNF genes & repeats | Adipose Nuclei | Adipose |
39 | chr10:42505800-42509200 | ZNF genes & repeats | HUES64 Cell Line | embryonic stem cell |
40 | chr10:42506000-42509200 | ZNF genes & repeats | Liver | Liver |
41 | chr10:42506200-42508600 | ZNF genes & repeats | Psoas Muscle | Psoas |
42 | chr10:42509600-42509800 | ZNF genes & repeats | Duodenum Smooth Muscle | Duodenum |
43 | chr10:42509800-42513800 | ZNF genes & repeats | HUES48 Cell Line | embryonic stem cell |
44 | chr10:42510200-42510600 | ZNF genes & repeats | Liver | Liver |
45 | chr10:42513200-42513600 | Active TSS | Fetal Heart | heart |
46 | chr10:42519000-42519400 | Active TSS | Right Atrium | heart |
47 | chr10:42519400-42520400 | Weak transcription | Right Atrium | heart |
48 | chr10:42519600-42521600 | ZNF genes & repeats | Adipose Nuclei | Adipose |
49 | chr10:42519800-42520000 | ZNF genes & repeats | Psoas Muscle | Psoas |
50 | chr10:42520400-42520800 | Active TSS | Right Atrium | heart |