Variant report

Variant	nsv1052942
Chromosome Location	chr15:31624164-31653633
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:883)
CpG islands
(count:366)
Chromatin interactive
region (count:26)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:883 , 50 per page) page: 1 2 3 4 5 6 7 ... 18

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ATF2	chr15:31653380-31653938	GM12878	blood:	n/a	n/a
2	ATF2	chr15:31645083-31646122	GM12878	blood:	n/a	n/a
3	ATF2	chr15:31638154-31639173	GM12878	blood:	n/a	n/a
4	ATF2	chr15:31653309-31653889	GM12878	blood:	n/a	n/a
5	ATF2	chr15:31645166-31646019	GM12878	blood:	n/a	n/a
6	ATF2	chr15:31630362-31631554	GM12878	blood:	n/a	n/a
7	ATF2	chr15:31630891-31631482	GM12878	blood:	n/a	n/a
8	BATF	chr15:31631059-31631419	GM12878	blood:	n/a	n/a
9	BATF	chr15:31645275-31645928	GM12878	blood:	n/a	n/a
10	BCL11A	chr15:31630807-31631455	GM12878	blood:	n/a	chr15:31631024-31631033
11	BCL11A	chr15:31645606-31645955	GM12878	blood:	n/a	chr15:31645718-31645727
12	BCL11A	chr15:31630926-31631417	GM12878	blood:	n/a	chr15:31631024-31631033
13	BCL11A	chr15:31645267-31645999	GM12878	blood:	n/a	chr15:31645718-31645727
14	BCL3	chr15:31645251-31645804	GM12878	blood:	n/a	chr15:31645718-31645727
15	BCL3	chr15:31630805-31631461	GM12878	blood:	n/a	chr15:31631024-31631033
16	BCLAF1	chr15:31630754-31631514	GM12878	blood:	n/a	chr15:31631024-31631033
17	BCLAF1	chr15:31630634-31631448	GM12878	blood:	n/a	chr15:31631024-31631033
18	BCLAF1	chr15:31649141-31649645	GM12878	blood:	n/a	n/a
19	BCLAF1	chr15:31645084-31646178	GM12878	blood:	n/a	chr15:31645718-31645727
20	BCLAF1	chr15:31653347-31654052	GM12878	blood:	n/a	n/a
21	BCLAF1	chr15:31638283-31639140	GM12878	blood:	n/a	n/a
22	BCLAF1	chr15:31645247-31646052	GM12878	blood:	n/a	chr15:31645718-31645727
23	BHLHE40	chr15:31624450-31624709	GM12878	blood:	n/a	n/a
24	BHLHE40	chr15:31630916-31631461	GM12878	blood:	n/a	n/a
25	BHLHE40	chr15:31637444-31639121	GM12878	blood:	n/a	n/a
26	BHLHE40	chr15:31653357-31654015	GM12878	blood:	n/a	chr15:31653365-31653381
27	BHLHE40	chr15:31630351-31630693	GM12878	blood:	n/a	n/a
28	BHLHE40	chr15:31645249-31646110	GM12878	blood:	n/a	n/a
29	BHLHE40	chr15:31645316-31645666	K562	blood:	n/a	n/a
30	BHLHE40	chr15:31624374-31624457	K562	blood:	n/a	n/a
31	BRCA1	chr15:31631139-31631146	HepG2	liver:	n/a	n/a
32	CEBPB	chr15:31651131-31651499	A549	lung:	n/a	chr15:31651309-31651320 chr15:31651311-31651322
33	CEBPB	chr15:31651230-31651419	K562	blood:	n/a	chr15:31651309-31651320 chr15:31651311-31651322
34	CEBPB	chr15:31651194-31651494	MCF-7	breast:	n/a	chr15:31651309-31651320 chr15:31651311-31651322
35	CEBPB	chr15:31651040-31651581	A549	lung:	n/a	chr15:31651309-31651320 chr15:31651311-31651322
36	CEBPB	chr15:31645193-31645923	GM12878	blood:	n/a	n/a
37	CEBPB	chr15:31645369-31645654	GM12878	blood:	n/a	n/a
38	CEBPB	chr15:31651107-31651528	ECC-1	luminal epithelium:	n/a	chr15:31651309-31651320 chr15:31651311-31651322
39	CEBPB	chr15:31651831-31651977	K562	blood:	n/a	n/a
40	CEBPB	chr15:31651140-31651499	HepG2	liver:	n/a	chr15:31651309-31651320 chr15:31651311-31651322
41	CEBPB	chr15:31653340-31653902	GM12878	blood:	n/a	n/a
42	CEBPB	chr15:31637929-31638633	GM12878	blood:	n/a	n/a
43	CEBPB	chr15:31651204-31651460	Hela-S3	cervix:	n/a	chr15:31651309-31651320 chr15:31651311-31651322
44	CEBPB	chr15:31651220-31651389	K562	blood:	n/a	chr15:31651309-31651320 chr15:31651311-31651322
45	CEBPB	chr15:31651137-31651476	MCF-7	breast:	n/a	chr15:31651309-31651320 chr15:31651311-31651322
46	CEBPB	chr15:31651140-31651515	A549	lung:	n/a	chr15:31651309-31651320 chr15:31651311-31651322
47	CEBPB	chr15:31651102-31651508	K562	blood:	n/a	chr15:31651309-31651320 chr15:31651311-31651322
48	CEBPB	chr15:31651125-31651517	ECC-1	luminal epithelium:	n/a	chr15:31651309-31651320 chr15:31651311-31651322
49	CHD1	chr15:31631257-31631662	GM12878	blood:	n/a	n/a
50	CHD1	chr15:31645229-31646064	GM12878	blood:	n/a	n/a

(count:366 , 50 per page) page: 1 2 3 4 5 6 7 8

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr15:31631240-31631290	AG04450	lung:	fetal
2	chr15:31651072-31651122	NHBE	bronchial:	n/a
3	chr15:31637592-31637642	SK-N-SH_RA	brain:	n/a
4	chr15:31624584-31624634	HCM	heart:	n/a
5	chr15:31624584-31624634	HAEpiC	amniotic membrane:	n/a
6	chr15:31645503-31645553	HEEpiC	esophagus:	n/a
7	chr15:31625860-31625910	MCF-7	breast:	n/a
8	chr15:31637592-31637642	ProgFib	skin:	n/a
9	chr15:31645503-31645553	PrEC	prostate:	n/a
10	chr15:31645503-31645553	HRE	kidney:	n/a
11	chr15:31651072-31651122	LNCaP	prostate:	n/a
12	chr15:31645503-31645553	IMR90	lung:	fetal
13	chr15:31637592-31637642	CMK	blood:	n/a
14	chr15:31625860-31625910	U87	brain:	n/a
15	chr15:31625860-31625910	HepG2	liver:	n/a
16	chr15:31631240-31631290	PANC-1	pancreas:	n/a
17	chr15:31624584-31624634	BE2_C	brain:	n/a
18	chr15:31651072-31651122	MCF-7	breast:	n/a
19	chr15:31651072-31651122	ProgFib	skin:	n/a
20	chr15:31637592-31637642	AG04450	lung:	fetal
21	chr15:31651072-31651122	ECC-1	luminal epithelium:	n/a
22	chr15:31624584-31624634	HMEC	breast:	n/a
23	chr15:31624584-31624634	K562	blood:	n/a
24	chr15:31645503-31645553	SAEC	small airway:	n/a
25	chr15:31651072-31651122	AG10803	skin:	n/a
26	chr15:31624584-31624634	SAEC	small airway:	n/a
27	chr15:31624584-31624634	AG09319	gingival:	n/a
28	chr15:31625860-31625910	NH-A	brain:	n/a
29	chr15:31625860-31625910	ProgFib	skin:	n/a
30	chr15:31637592-31637642	HRE	kidney:	n/a
31	chr15:31645503-31645553	RPTEC	kidney:	n/a
32	chr15:31645503-31645553	ECC-1	luminal epithelium:	n/a
33	chr15:31645503-31645553	HAEpiC	amniotic membrane:	n/a
34	chr15:31645503-31645553	GM12878	blood:	n/a
35	chr15:31631240-31631290	AoSMC	blood vessel:	n/a
36	chr15:31631240-31631290	SK-N-SH	brain:	n/a
37	chr15:31625860-31625910	HUVEC	blood vessel:	n/a
38	chr15:31645503-31645553	GM19239	blood:	n/a
39	chr15:31651072-31651122	NB4	blood:	n/a
40	chr15:31637592-31637642	SKMC	muscle:	n/a
41	chr15:31651072-31651122	SK-N-MC	brain:	n/a
42	chr15:31624584-31624634	H1-hESC	embryonic stem cell:	embryo
43	chr15:31624584-31624634	PANC-1	pancreas:	n/a
44	chr15:31631240-31631290	Hela-S3	cervix:	n/a
45	chr15:31645503-31645553	AG04449	skin:	fetal
46	chr15:31645503-31645553	Caco-2	colon:	n/a
47	chr15:31651072-31651122	NHDF-neo	bronchial:	n/a
48	chr15:31631240-31631290	SK-N-MC	brain:	n/a
49	chr15:31624584-31624634	HRE	kidney:	n/a
50	chr15:31651072-31651122	AG09309	skin:	n/a

(count:26 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr15:31627397..31629658-chr15:31630745..31632806,2	K562	blood:
2	chr15:31617749..31621012-chr15:31623649..31627723,5	MCF-7	breast:
3	chr15:31624025..31626042-chr15:31627100..31628878,2	MCF-7	breast:
4	chr15:31643860..31648950-chr15:31650672..31654273,5	MCF-7	breast:
5	chr15:31646378..31648001-chr15:31648194..31650434,2	MCF-7	breast:
6	chr15:31618754..31620549-chr15:31631588..31633647,2	K562	blood:
7	chr15:31618838..31621702-chr15:31631313..31632972,2	MCF-7	breast:
8	chr15:31618267..31621353-chr15:31621763..31625829,5	MCF-7	breast:
9	chr15:31618168..31621382-chr15:31631982..31634646,4	MCF-7	breast:
10	chr15:31623211..31625862-chr15:31627016..31631402,5	K562	blood:
11	chr15:31624025..31626042-chr15:31627100..31628878,2	MCF-7	breast:
12	chr15:31646378..31648001-chr15:31648194..31650434,2	MCF-7	breast:
13	chr15:31618069..31620740-chr15:31641222..31643035,2	K562	blood:
14	chr15:31615054..31617899-chr15:31634755..31636481,2	MCF-7	breast:
15	chr15:31647650..31653294-chr15:31653476..31658122,6	K562	blood:
16	chr15:31619012..31620536-chr15:31636634..31639264,2	K562	blood:
17	chr15:31648189..31650895-chr15:31656697..31659510,2	MCF-7	breast:
18	chr15:31623034..31624818-chr15:31626404..31628537,2	MCF-7	breast:
19	chr15:31643860..31648950-chr15:31650672..31654273,5	MCF-7	breast:
20	chr15:31619498..31621793-chr15:31638064..31640395,2	MCF-7	breast:
21	chr15:31652135..31653861-chr15:31655364..31657123,2	MCF-7	breast:
22	chr15:31627136..31629946-chr15:31655058..31657615,2	K562	blood:
23	chr15:31623211..31625862-chr15:31627016..31631402,5	K562	blood:
24	chr15:31637997..31638658-chr15:31727655..31728625,2	MCF-7	breast:
25	chr15:31647650..31653294-chr15:31653476..31658122,6	K562	blood:
26	chr15:31623034..31624818-chr15:31626404..31628537,2	MCF-7	breast:

No data

Variant related genes	Relation type
KLF13	TF binding region
KLF13	CpG island
ENSG00000169926	chromatin interactions

Extended variants
information (count: 1236 )
Associated
traits (count: 92 )

Variant overlapped rSNPs/rCNVs (count:1236 , 50 per page) page: 1 2 3 4 5 6 7 ... 25

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs185704597	chr15:31624173-31624174	Weak transcription Enhancers Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
2	rs117275442	chr15:31624187-31624188	Weak transcription Enhancers Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
3	rs116325953	chr15:31624214-31624215	Weak transcription Enhancers Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
4	rs555092339	chr15:31624232-31624233	Weak transcription Enhancers Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
5	rs75218653	chr15:31624248-31624249	Weak transcription Enhancers Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
6	rs543692122	chr15:31624297-31624298	Weak transcription Enhancers Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
7	rs190423747	chr15:31624299-31624300	Weak transcription Enhancers Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
8	rs566769523	chr15:31624362-31624363	Weak transcription Enhancers Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
9	rs563924513	chr15:31624364-31624365	Weak transcription Enhancers Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
10	rs145683744	chr15:31624452-31624453	Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
11	rs78321580	chr15:31624467-31624468	Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
12	rs560048636	chr15:31624469-31624470	Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
13	rs147289553	chr15:31624480-31624481	Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
14	rs34693358	chr15:31624505-31624506	Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
15	rs182256283	chr15:31624515-31624516	Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
16	rs531048266	chr15:31624561-31624562	Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
17	rs550766997	chr15:31624573-31624574	Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
18	rs187708813	chr15:31624578-31624579	Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
19	rs575213156	chr15:31624584-31624585	Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
20	rs539214009	chr15:31624613-31624614	Weak transcription Enhancers Genic enhancers Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
21	rs567406912	chr15:31624648-31624649	Weak transcription Enhancers Genic enhancers Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
22	rs546527375	chr15:31624649-31624650	Weak transcription Enhancers Genic enhancers Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
23	rs566429081	chr15:31624650-31624651	Weak transcription Enhancers Genic enhancers Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
24	rs373375955	chr15:31624658-31624659	Weak transcription Enhancers Genic enhancers Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
25	rs535111775	chr15:31624661-31624662	Weak transcription Enhancers Genic enhancers Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
26	rs193230969	chr15:31624664-31624665	Weak transcription Enhancers Genic enhancers Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
27	rs11637074	chr15:31624695-31624696	Weak transcription Enhancers Genic enhancers Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
28	rs372339126	chr15:31624707-31624708	Weak transcription Enhancers Genic enhancers Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
29	rs183965899	chr15:31624711-31624712	Weak transcription Enhancers Genic enhancers Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
30	rs557523279	chr15:31624713-31624714	Weak transcription Enhancers Genic enhancers Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
31	rs188523892	chr15:31624720-31624721	Weak transcription Enhancers Genic enhancers Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
32	rs140903836	chr15:31624722-31624723	Weak transcription Enhancers Genic enhancers Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
33	rs192109717	chr15:31624769-31624770	Weak transcription Enhancers Genic enhancers Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
34	rs573560670	chr15:31624790-31624791	Weak transcription Enhancers Genic enhancers Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
35	rs571604914	chr15:31624796-31624797	Weak transcription Enhancers Genic enhancers Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
36	rs370853878	chr15:31624808-31624809	Enhancers Genic enhancers Weak transcription Flanking Active TSS Strong transcription Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
37	rs149832457	chr15:31624850-31624851	Enhancers Genic enhancers Weak transcription Flanking Active TSS Strong transcription Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
38	rs562085018	chr15:31624927-31624928	Enhancers Genic enhancers Weak transcription Flanking Active TSS Strong transcription Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
39	rs530763873	chr15:31624949-31624950	Enhancers Genic enhancers Weak transcription Flanking Active TSS Strong transcription Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
40	rs571764598	chr15:31624953-31624954	Enhancers Genic enhancers Weak transcription Flanking Active TSS Strong transcription Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
41	rs562875927	chr15:31624959-31624960	Enhancers Genic enhancers Weak transcription Flanking Active TSS Strong transcription Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
42	rs551060659	chr15:31624965-31624966	Enhancers Genic enhancers Weak transcription Flanking Active TSS Strong transcription Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
43	rs118018549	chr15:31624966-31624967	Enhancers Genic enhancers Weak transcription Flanking Active TSS Strong transcription Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
44	rs538971631	chr15:31624968-31624969	Enhancers Genic enhancers Weak transcription Flanking Active TSS Strong transcription Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
45	rs533203759	chr15:31624974-31624975	Enhancers Genic enhancers Weak transcription Flanking Active TSS Strong transcription Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
46	rs546370044	chr15:31624987-31624988	Enhancers Genic enhancers Weak transcription Flanking Active TSS Strong transcription Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
47	rs566465878	chr15:31625035-31625036	Weak transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
48	rs535377874	chr15:31625036-31625037	Weak transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
49	rs4779516	chr15:31625040-31625041	Weak transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
50	rs145758681	chr15:31625056-31625057	Weak transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:92)

Disease	PMID	Source
HDAC8	0	CNVD
NIPBL	0	CNVD
RAD21	0	CNVD
SMC1A	0	CNVD
SMC3	0	CNVD
Ewing''s sarcoma	21437220	CNVD
Schizophrenia	19415332	CNVD
Breast cancer	22522925	CNVD
Autism	22495311	CNVD
Wilms tumour	21544195	CNVD
Angelman syndrome	16183798	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Testicular germ cell tumor	18059402	CNVD
cataract	16735990	CNVD
Cancer	21637783	CNVD
Colorectal cancer	20709793	CNVD
Medulloblastoma	21979893	CNVD
spastic paraplegia with thinning of corpus callosum	19105190	CNVD
Schizophrenia	21324950	CNVD
Astrocytoma	17387387	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Disease	21824424	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Melanoma	18172304	CNVD
Autism	17322880	CNVD
Prader-willi syndrome	19329560	CNVD
Autism	17999366	CNVD
Autism	17901113	CNVD
Neurodevelopmental disorder	17015230	CNVD
Autism	18414403	CNVD
Neurocytoma	17123091	CNVD
Mental retardation	18923513	CNVD
Colorectal cancer	16774939	CNVD
Gastric cancer	17167181	CNVD
Neuroblastoma	19435921	CNVD
Colorectal cancer	19359472	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Colorectal cancer	16272173	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Multiple myeloma	17550852	CNVD
Gastrointestinal stromal cancer	20818650	CNVD
Intellectual disability	22102821	CNVD
Hodgkin''s lymphoma	17606441	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Breast cancer	21509527	CNVD
Acute myeloid leukemia	20729466	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Breast cancer	17133270	CNVD
Prostate cancer	16573809	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Multiple myeloma	20724749	CNVD
Lung cancer	18438408	CNVD
Breast cancer	21858162	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Breast cancer	21785460	CNVD
Prostate cancer	18632612	CNVD
Abnormal corpus callosum	21572526	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Autism	19204725	CNVD
Schizophrenia	19204725	CNVD
Schizophrenia	19149910	CNVD
Ovarian cancer	22174824	CNVD
Epilepsy	20502679	CNVD
small cell lung cancer	20016488	CNVD
Autism	19521722	CNVD
Bipolar disorder	19114987	CNVD
Epilepsy	19521722	CNVD
Mental retardation	19521722	CNVD
Schizophrenia	19521646	CNVD
Autism	19050728	CNVD
Schizophrenia	19348701	CNVD
Schizophrenia	18668039	CNVD
Schizophrenia	18990708	CNVD
Schizophrenia	19571808	CNVD
Velocardiofacial syndrome	19329560	CNVD
Schizophrenia	19443537	CNVD
Epilepsy	20923578	CNVD
Autism	19955444	CNVD
Autism	20964600	CNVD
Schizophrenia	19955444	CNVD
Olfactory neuroblastoma	18408657	CNVD
Pancreatic cancer	17952125	CNVD
Legius syndrome	19443465	CNVD
Holoprosencephaly	21359414	CNVD
Myelofibrosis	22110671	CNVD
Glioblastoma multiforme	22286061	CNVD
Renal cell carcinoma	21215367	CNVD
Cancer	20164919	CNVD

Chromatin state (count:2132 , 50 per page) page: 1 2 3 4 5 6 7 ... 43

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:31620800-31632600	Enhancers	Fetal Heart	heart
2	chr15:31621000-31624600	Transcr. at gene 5' and 3'	Dnd41	blood
3	chr15:31621000-31624800	Weak transcription	Ovary	ovary
4	chr15:31621000-31626600	Transcr. at gene 5' and 3'	Thymus	Thymus
5	chr15:31621400-31624400	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
6	chr15:31621400-31625000	Enhancers	Fetal Muscle Leg	muscle
7	chr15:31621400-31625200	Enhancers	Fetal Brain Male	brain
8	chr15:31621400-31626000	Weak transcription	Aorta	Aorta
9	chr15:31621600-31624200	Weak transcription	K562	blood
10	chr15:31621600-31625000	Enhancers	Cortex derived primary cultured neurospheres	brain
11	chr15:31621600-31637200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
12	chr15:31621800-31624400	Flanking Active TSS	Primary T killer memory cells from peripheral blood	blood
13	chr15:31621800-31624600	Genic enhancers	Spleen	Spleen
14	chr15:31621800-31625000	Flanking Active TSS	Primary T helper naive cells from peripheral blood	blood
15	chr15:31621800-31625200	Transcr. at gene 5' and 3'	Fetal Thymus	thymus
16	chr15:31621800-31630600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
17	chr15:31621800-31636000	Enhancers	Small Intestine	intestine
18	chr15:31621800-31637600	Enhancers	Psoas Muscle	Psoas
19	chr15:31622000-31624200	Transcr. at gene 5' and 3'	Primary T regulatory cells fromperipheralblood	blood
20	chr15:31622000-31624400	Weak transcription	HUES48 Cell Line	embryonic stem cell
21	chr15:31622000-31624400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
22	chr15:31622000-31624800	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
23	chr15:31622000-31625000	Weak transcription	H9 Cell Line	embryonic stem cell
24	chr15:31622000-31625200	Enhancers	Breast Myoepithelial Primary Cells	Breast
25	chr15:31622000-31625600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
26	chr15:31622000-31625800	Enhancers	H1 Cell Line	embryonic stem cell
27	chr15:31622000-31630600	Enhancers	Skeletal Muscle Female	skeletal muscle
28	chr15:31622000-31634600	Enhancers	Stomach Mucosa	stomach
29	chr15:31622000-31637600	Enhancers	Left Ventricle	heart
30	chr15:31622200-31624200	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
31	chr15:31622200-31624400	Transcr. at gene 5' and 3'	Primary T helper naive cells fromperipheralblood	blood
32	chr15:31622200-31624600	Weak transcription	iPS-18 Cell Line	embryonic stem cell
33	chr15:31622200-31630200	Weak transcription	Pancreatic Islets	Pancreatic Islet
34	chr15:31622200-31630400	Weak transcription	NH-A	brain
35	chr15:31622200-31630600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
36	chr15:31622200-31633200	Weak transcription	Placenta Amnion	Placenta Amnion
37	chr15:31622400-31624200	Enhancers	Esophagus	oesophagus
38	chr15:31622400-31625000	Genic enhancers	Fetal Intestine Small	intestine
39	chr15:31622400-31625600	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
40	chr15:31622400-31626000	Enhancers	Primary hematopoietic stem cells	blood
41	chr15:31622400-31628000	Enhancers	Adipose Nuclei	Adipose
42	chr15:31622400-31631600	Enhancers	Right Ventricle	heart
43	chr15:31622600-31624200	Genic enhancers	Primary Natural Killer cells fromperipheralblood	blood
44	chr15:31622600-31624400	Weak transcription	HUES6 Cell Line	embryonic stem cell
45	chr15:31622600-31624400	Genic enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
46	chr15:31622600-31624400	Genic enhancers	NHEK	skin
47	chr15:31622600-31624600	Strong transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
48	chr15:31622600-31624600	Weak transcription	Placenta	Placenta
49	chr15:31622600-31627000	Weak transcription	Rectal Smooth Muscle	rectum
50	chr15:31622600-31630200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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