Variant report

Variant	nsv1053189
Chromosome Location	chr11:4123119-4359044
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1554)
CpG islands
(count:855)
Chromatin interactive
region (count:63)
LncRNA
region (count:13)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1554 , 50 per page) page: 1 2 3 4 5 6 7 ... 32

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr11:4203458-4203639	HepG2	liver:	n/a	n/a
2	ARID3A	chr11:4156148-4156493	HepG2	liver:	n/a	n/a
3	ARID3A	chr11:4205750-4205950	K562	blood:	n/a	n/a
4	ARID3A	chr11:4216109-4216597	K562	blood:	n/a	n/a
5	ARID3A	chr11:4208203-4208403	K562	blood:	n/a	n/a
6	ATF1	chr11:4216207-4216475	K562	blood:	n/a	n/a
7	ATF1	chr11:4182582-4182803	K562	blood:	n/a	n/a
8	ATF1	chr11:4167279-4168246	K562	blood:	n/a	n/a
9	ATF1	chr11:4218126-4218315	K562	blood:	n/a	n/a
10	ATF3	chr11:4208748-4209028	H1-hESC	embryonic stem cell:	n/a	n/a
11	BACH1	chr11:4208789-4209061	H1-hESC	embryonic stem cell:	n/a	n/a
12	BACH1	chr11:4233294-4233648	H1-hESC	embryonic stem cell:	n/a	n/a
13	BACH1	chr11:4209051-4209129	K562	blood:	n/a	n/a
14	BACH1	chr11:4224962-4225178	H1-hESC	embryonic stem cell:	n/a	n/a
15	BACH1	chr11:4137391-4137635	H1-hESC	embryonic stem cell:	n/a	n/a
16	BACH1	chr11:4167574-4167591	K562	blood:	n/a	n/a
17	BATF	chr11:4186428-4186725	GM12878	blood:	n/a	n/a
18	BHLHE40	chr11:4167445-4168270	K562	blood:	n/a	n/a
19	BHLHE40	chr11:4208122-4208459	K562	blood:	n/a	n/a
20	BHLHE40	chr11:4208773-4209110	K562	blood:	n/a	chr11:4208989-4209005
21	BHLHE40	chr11:4202929-4203828	K562	blood:	n/a	n/a
22	BHLHE40	chr11:4208769-4209074	GM12878	blood:	n/a	chr11:4208989-4209005
23	BHLHE40	chr11:4216191-4216537	K562	blood:	n/a	n/a
24	BRCA1	chr11:4208834-4209055	Hela-S3	cervix:	n/a	n/a
25	BRCA1	chr11:4208855-4208989	HepG2	liver:	n/a	n/a
26	CBX3	chr11:4167134-4168147	K562	blood:	n/a	n/a
27	CBX3	chr11:4207969-4208291	K562	blood:	n/a	n/a
28	CBX3	chr11:4203292-4203924	K562	blood:	n/a	n/a
29	CBX3	chr11:4208019-4208474	K562	blood:	n/a	n/a
30	CBX3	chr11:4208772-4209129	K562	blood:	n/a	n/a
31	CBX3	chr11:4161399-4161928	HCT-116	colon:	n/a	n/a
32	CBX3	chr11:4161301-4161848	K562	blood:	n/a	n/a
33	CBX3	chr11:4152290-4152720	K562	blood:	n/a	n/a
34	CBX3	chr11:4161255-4161917	K562	blood:	n/a	n/a
35	CBX3	chr11:4161476-4161946	HCT-116	colon:	n/a	n/a
36	CCNT2	chr11:4216171-4216526	K562	blood:	n/a	n/a
37	CCNT2	chr11:4205703-4206232	K562	blood:	n/a	n/a
38	CCNT2	chr11:4208203-4209367	K562	blood:	n/a	chr11:4209066-4209075 chr11:4208444-4208453
39	CCNT2	chr11:4167349-4168021	K562	blood:	n/a	n/a
40	CEBPB	chr11:4205634-4205851	K562	blood:	n/a	chr11:4205745-4205756
41	CEBPB	chr11:4139300-4139718	IMR90	lung:	n/a	n/a
42	CEBPB	chr11:4208295-4208391	K562	blood:	n/a	n/a
43	CEBPB	chr11:4205560-4205942	IMR90	lung:	n/a	chr11:4205745-4205756
44	CEBPB	chr11:4141993-4142220	HepG2	liver:	n/a	n/a
45	CEBPB	chr11:4125755-4126017	K562	blood:	n/a	chr11:4125911-4125922
46	CEBPB	chr11:4125761-4126085	Hela-S3	cervix:	n/a	chr11:4125911-4125922
47	CEBPB	chr11:4208020-4208479	Hela-S3	cervix:	n/a	n/a
48	CEBPB	chr11:4124697-4124791	K562	blood:	n/a	n/a
49	CEBPB	chr11:4205574-4206017	K562	blood:	n/a	chr11:4205745-4205756
50	CEBPB	chr11:4257961-4258189	K562	blood:	n/a	chr11:4258101-4258112 chr11:4258101-4258110 chr11:4258099-4258110

(count:855 , 50 per page) page: 1 2 3 4 5 6 7 ... 18

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr11:4158576-4158626	HIPEpiC	eye:	n/a
2	chr11:4158576-4158626	HIPEpiC	eye:	n/a
3	chr11:4208723-4208773	NH-A	brain:	n/a
4	chr11:4208905-4208955	SKMC	muscle:	n/a
5	chr11:4208723-4208773	SK-N-MC	brain:	n/a
6	chr11:4258933-4258983	GM12891	blood:	n/a
7	chr11:4159839-4159889	SK-N-SH_RA	brain:	n/a
8	chr11:4208723-4208773	NB4	blood:	n/a
9	chr11:4209120-4209170	HRCEpiC	kidney:	n/a
10	chr11:4208278-4208328	AG04449	skin:	fetal
11	chr11:4212446-4212496	RPTEC	kidney:	n/a
12	chr11:4209120-4209170	SAEC	small airway:	n/a
13	chr11:4158576-4158626	NB4	blood:	n/a
14	chr11:4206098-4206148	HCF	heart:	n/a
15	chr11:4158576-4158626	SKMC	muscle:	n/a
16	chr11:4208905-4208955	MCF-7	breast:	n/a
17	chr11:4206098-4206148	AG09309	skin:	n/a
18	chr11:4206098-4206148	NHDF-neo	bronchial:	n/a
19	chr11:4208723-4208773	NHDF-neo	bronchial:	n/a
20	chr11:4259129-4259179	RPTEC	kidney:	n/a
21	chr11:4208723-4208773	AG10803	skin:	n/a
22	chr11:4212471-4212521	RPTEC	kidney:	n/a
23	chr11:4209120-4209170	AG09309	skin:	n/a
24	chr11:4259129-4259179	HRCEpiC	kidney:	n/a
25	chr11:4212446-4212496	CMK	blood:	n/a
26	chr11:4159839-4159889	AG10803	skin:	n/a
27	chr11:4208449-4208499	HMEC	breast:	n/a
28	chr11:4208449-4208499	SK-N-MC	brain:	n/a
29	chr11:4209397-4209447	CMK	blood:	n/a
30	chr11:4233502-4233552	PANC-1	pancreas:	n/a
31	chr11:4158576-4158626	H1-hESC	embryonic stem cell:	embryo
32	chr11:4208278-4208328	GM12878	blood:	n/a
33	chr11:4158576-4158626	HL-60	blood:	n/a
34	chr11:4209120-4209170	PANC-1	pancreas:	n/a
35	chr11:4206098-4206148	SAEC	small airway:	n/a
36	chr11:4206098-4206148	MCF-7	breast:	n/a
37	chr11:4209397-4209447	SKMC	muscle:	n/a
38	chr11:4159839-4159889	HCM	heart:	n/a
39	chr11:4209120-4209170	GM12878	blood:	n/a
40	chr11:4208723-4208773	HCPEpiC	choroid plexus:	n/a
41	chr11:4212471-4212521	K562	blood:	n/a
42	chr11:4158576-4158626	ProgFib	skin:	n/a
43	chr11:4212471-4212521	AG09309	skin:	n/a
44	chr11:4159839-4159889	ovcar-3	ovarian:	n/a
45	chr11:4212471-4212521	LNCaP	prostate:	n/a
46	chr11:4208905-4208955	A549	lung:	n/a
47	chr11:4208723-4208773	Hepatocyte	liver:	n/a
48	chr11:4258933-4258983	HIPEpiC	eye:	n/a
49	chr11:4258933-4258983	MCF10A-Er-Src	breast:	n/a
50	chr11:4159839-4159889	MCF-7	breast:	n/a

(count:63 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr11:4205317..4208248-chr11:4208372..4210447,2	K562	blood:
2	chr11:4184965..4186583-chr11:4189758..4191938,2	K562	blood:
3	chr11:4208891..4209471-chr11:4572771..4573597,3	MCF-7	breast:
4	chr11:448205..448777-chr11:4123504..4124085,2	NB4	blood:
5	chr11:4118205..4121110-chr11:4126914..4129955,3	K562	blood:
6	chr11:4146273..4149774-chr11:4150555..4152860,3	K562	blood:
7	chr11:4122423..4125552-chr11:4126686..4130745,3	K562	blood:
8	chr11:4139381..4140909-chr11:4144756..4147427,2	K562	blood:
9	chr11:4124837..4126563-chr11:4128507..4131052,2	MCF-7	breast:
10	chr11:4201110..4205265-chr11:4206798..4209054,5	K562	blood:
11	chr11:4213864..4216366-chr11:4216449..4218991,2	K562	blood:
12	chr11:4208460..4209382-chr11:4513705..4515541,8	MCF-7	breast:
13	chr11:4164447..4167814-chr11:4181176..4184235,3	K562	blood:
14	chr11:4228086..4230506-chr11:4230807..4233604,2	K562	blood:
15	chr11:4141819..4145770-chr11:4146926..4149834,4	K562	blood:
16	chr11:4135275..4137434-chr11:4139419..4142096,2	K562	blood:
17	chr11:4184965..4187541-chr11:4189558..4191938,3	K562	blood:
18	chr11:4127913..4129434-chr11:4131609..4133948,2	K562	blood:
19	chr11:4118572..4121110-chr11:4127207..4129203,2	K562	blood:
20	chr11:4216149..4218781-chr11:4227899..4229558,2	K562	blood:
21	chr11:4162871..4165592-chr11:4176787..4178480,2	K562	blood:
22	chr11:4115681..4117881-chr11:4185154..4187618,2	K562	blood:
23	chr11:4199192..4201604-chr11:4201999..4204007,2	K562	blood:
24	chr11:4122423..4125513-chr11:4126686..4130996,4	K562	blood:
25	chr11:4205317..4208248-chr11:4208372..4210447,2	K562	blood:
26	chr11:4184965..4187541-chr11:4189558..4191938,3	K562	blood:
27	chr11:4115769..4117950-chr11:4125666..4127291,2	MCF-7	breast:
28	chr11:4212714..4216366-chr11:4216449..4218991,4	K562	blood:
29	chr11:4208647..4209327-chr11:4572350..4573087,2	MCF-7	breast:
30	chr11:4208515..4209433-chr11:4658248..4659042,2	K562	blood:
31	chr11:4116269..4118457-chr11:4145281..4147453,2	MCF-7	breast:
32	chr11:4149701..4154222-chr11:4154719..4157955,5	K562	blood:
33	chr11:4149701..4154222-chr11:4154719..4157955,5	K562	blood:
34	chr11:4216149..4218781-chr11:4227899..4229558,2	K562	blood:
35	chr11:4198544..4201486-chr11:4213764..4216577,2	K562	blood:
36	chr11:4117926..4120153-chr11:4124381..4126290,2	K562	blood:
37	chr11:4146273..4149774-chr11:4150555..4152860,3	K562	blood:
38	chr11:4162871..4165592-chr11:4176787..4178480,2	K562	blood:
39	chr11:4173240..4175304-chr11:4176412..4178994,2	K562	blood:
40	chr11:4114277..4116935-chr11:4123036..4125551,3	K562	blood:
41	chr11:4199192..4201604-chr11:4201999..4204007,2	K562	blood:
42	chr11:4164447..4167814-chr11:4181176..4184235,3	K562	blood:
43	chr11:4213864..4216366-chr11:4216449..4218991,2	K562	blood:
44	chr11:4143060..4145148-chr11:4146207..4148504,3	K562	blood:
45	chr11:4131355..4133542-chr11:4137072..4140145,3	K562	blood:
46	chr11:4121718..4123279-chr11:4133044..4134599,2	K562	blood:
47	chr11:4170971..4173505-chr11:4175142..4177100,2	K562	blood:
48	chr11:4121718..4123279-chr11:4133044..4134599,2	K562	blood:
49	chr11:4147473..4149086-chr11:4158562..4161452,2	K562	blood:
50	chr11:4124837..4126563-chr11:4128507..4131052,2	MCF-7	breast:

(count:13 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-RRM1-2	chr11:4208382-4208434	NR_047550
2	lnc-RRM1-2	chr11:4223489-4223885	ENSG00000254480.1
3	lnc-RRM1-2	chr11:4201862-4201941	NONHSAT017640
4	lnc-RRM1-2	chr11:4208370-4208434	ENSG00000254480.1
5	lnc-OR52B4-3	chr11:4201787-4201939	NONHSAT017641
6	lnc-RRM1-2	chr11:4200829-4201124	NONHSAT017640
7	lnc-RRM1-2	chr11:4223489-4223875	NONHSAT017640
8	lnc-OR52B4-3	chr11:4223487-4223875	NONHSAT017641
9	lnc-OR52B4-1	chr11:4158346-4158519	ENSG00000255276.1
10	lnc-OR52B4-1	chr11:4159316-4159487	ENSG00000255276.1
11	lnc-RRM1-2	chr11:4223489-4223881	NONHSAT017642
12	lnc-RRM1-2	chr11:4201859-4201941	NONHSAT017642
13	lnc-RRM1-2	chr11:4223489-4223883	NR_047550

No data

Variant related genes	Relation type
SSU72P2	TF binding region
SSU72P6	TF binding region
OR55B1P	TF binding region
ENSG00000255387	TF binding region
RRM1-AS1	TF binding region
SSU72P3	TF binding region
RRM1	TF binding region
SSU72P5	TF binding region
SSU72P4	TF binding region
ENSG00000254480	TF binding region
SSU72P2	CpG island
SSU72P6	CpG island
OR55B1P	CpG island
ENSG00000255387	CpG island
RRM1-AS1	CpG island
SSU72P3	CpG island
RRM1	CpG island
SSU72P5	CpG island
SSU72P4	CpG island
ENSG00000254480	CpG island
ENSG00000255387	chromatin interactions
ENSG00000174915	chromatin interactions
ENSG00000167325	chromatin interactions
ENSG00000254480	chromatin interactions
ENSG00000255276	chromatin interactions
ENSG00000231548	chromatin interactions

Extended variants
information (count: 4897 )
Associated
traits (count: 65 )

Variant overlapped rSNPs/rCNVs (count:4897 , 50 per page) page: 1 2 3 4 5 6 7 ... 98

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs11030937	chr11:4123119-4123120	Weak transcription Strong transcription ZNF genes & repeats	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs575874209	chr11:4123135-4123136	Weak transcription Strong transcription ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
3	rs189103234	chr11:4123198-4123199	Weak transcription Strong transcription ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
4	rs232055	chr11:4123203-4123204	Weak transcription Strong transcription ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
5	rs200901972	chr11:4123204-4123205	Weak transcription Strong transcription ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
6	rs369408113	chr11:4123228-4123229	Weak transcription Strong transcription ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
7	rs146995794	chr11:4123238-4123239	Weak transcription Strong transcription ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
8	rs372679213	chr11:4123243-4123244	Weak transcription Strong transcription ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
9	rs147638656	chr11:4123293-4123294	Weak transcription Strong transcription ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
10	rs113090419	chr11:4123294-4123295	Weak transcription Strong transcription ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
11	rs113559064	chr11:4123323-4123324	Weak transcription Strong transcription ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
12	rs1348310	chr11:4123345-4123346	Weak transcription Strong transcription ZNF genes & repeats	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
13	rs556110872	chr11:4123388-4123389	Weak transcription Strong transcription ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
14	rs181103888	chr11:4123392-4123393	Weak transcription Strong transcription ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
15	rs529116920	chr11:4123401-4123402	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
16	rs550733508	chr11:4123408-4123409	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
17	rs370611932	chr11:4123423-4123424	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
18	rs232054	chr11:4123427-4123428	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
19	rs533233871	chr11:4123458-4123459	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
20	rs58075299	chr11:4123459-4123460	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
21	rs184061706	chr11:4123503-4123504	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
22	rs570816541	chr11:4123514-4123515	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
23	rs535122895	chr11:4123557-4123558	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
24	rs564994112	chr11:4123625-4123626	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
25	rs368615997	chr11:4123715-4123716	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
26	rs553234250	chr11:4123722-4123723	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
27	rs189025400	chr11:4123726-4123727	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
28	rs535700552	chr11:4123739-4123740	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
29	rs375346945	chr11:4123743-4123744	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
30	rs11030942	chr11:4123761-4123762	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
31	rs575865165	chr11:4123799-4123800	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
32	rs369872693	chr11:4123837-4123838	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
33	rs546049329	chr11:4123850-4123851	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
34	rs180926047	chr11:4123861-4123862	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
35	rs368842511	chr11:4123868-4123869	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
36	rs560928962	chr11:4123932-4123933	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
37	rs147269057	chr11:4123944-4123945	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
38	rs539833421	chr11:4124104-4124105	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
39	rs1474500	chr11:4124112-4124113	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
40	rs573657765	chr11:4124167-4124168	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
41	rs148675797	chr11:4124168-4124169	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
42	rs186991926	chr11:4124180-4124181	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
43	rs533272681	chr11:4124181-4124182	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
44	rs564761624	chr11:4124210-4124211	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
45	rs560463945	chr11:4124232-4124233	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
46	rs192275302	chr11:4124257-4124258	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
47	rs373455304	chr11:4124262-4124263	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
48	rs10835613	chr11:4124276-4124277	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
49	rs74599619	chr11:4124282-4124283	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
50	rs550904197	chr11:4124317-4124318	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:65)

Disease	PMID	Source
Neuroblastoma	18923191	CNVD
Breast cancer	19432969	CNVD
Alzheimer''s disease	17576883	CNVD
Long-qt syndrome	17576883	CNVD
Emphysema	19352772	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Chordoma	18071362	CNVD
Breast cancer	16608533	CNVD
Cancer	21183584	CNVD
Gastric adenocarcinoma	19115996	CNVD
Hepatocellular carcinoma	16750200	CNVD
Burkitt''s lymphoma	19759907	CNVD
Breast cancer	17603634	CNVD
Medulloblastoma	21979893	CNVD
Thyroid cancer	19087340	CNVD
Melanoma	18172304	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Wilms tumour	21544195	CNVD
Parathyroid adenoma	22454399	CNVD
Chordoma	21602918	CNVD
Breast cancer	21949216	CNVD
Cancer	21637783	CNVD
Non-syndromic sensorineural hearing loss	19222835	CNVD
T-cell acute lymphoblastic leukemia	20065082	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Beckwith-Wiedemann syndrome	21518781	CNVD
Wilms tumour	21518781	CNVD
Hepatoblastoma	21518781	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Gastrointestinal stromal cancer	17535989	CNVD
Paraganglioma	17535989	CNVD
Pulmonary chondroma	17535989	CNVD
Gastric cancer	17908304	CNVD
Barrett''s syndrome	19417022	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Multiple myeloma	20724749	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Autism	22495311	CNVD
Lung cancer	18438408	CNVD
Esophageal adenocarcinoma	18519675	CNVD
Ovine squamous-cell carcinoma	17599052	CNVD
Myelofibrosis	22110671	CNVD
Glioma	17123091	CNVD
Lung cancer	16773561	CNVD
Neuroblastoma	21124317	CNVD
Lung adenocarcinoma	17086460	CNVD
Lung cancer	17086460	CNVD
Schizophrenia	21399695	CNVD
Gastric cancer	16891809	CNVD
Cancer	17160897	CNVD
Multiple myeloma	16616336	CNVD
small cell lung cancer	20016488	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Williams Syndrome	20824207	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
early-passage human iPS cells	21368824	CNVD
Ovarian clear cell carcinoma	21343371	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Schizophrenia	20967226	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:2043 , 50 per page) page: 1 2 3 4 5 6 7 ... 41

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:4117000-4124600	Weak transcription	Aorta	Aorta
2	chr11:4117000-4124600	Weak transcription	Left Ventricle	heart
3	chr11:4117000-4137200	Weak transcription	Esophagus	oesophagus
4	chr11:4117000-4141000	Weak transcription	Ovary	ovary
5	chr11:4117200-4126800	Weak transcription	Psoas Muscle	Psoas
6	chr11:4117200-4127400	Weak transcription	Rectal Mucosa Donor 31	rectum
7	chr11:4117200-4142200	Weak transcription	Colonic Mucosa	Colon
8	chr11:4117400-4124200	Weak transcription	Brain Anterior Caudate	brain
9	chr11:4117400-4124600	Weak transcription	Lung	lung
10	chr11:4117400-4124600	Weak transcription	Skeletal Muscle Male	skeletal muscle
11	chr11:4117400-4125800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
12	chr11:4117400-4141800	Weak transcription	Small Intestine	intestine
13	chr11:4117600-4123200	Weak transcription	Placenta	Placenta
14	chr11:4117600-4123400	Weak transcription	Adipose Nuclei	Adipose
15	chr11:4117600-4123800	Weak transcription	Primary B cells from peripheral blood	blood
16	chr11:4117600-4124000	Weak transcription	H1 Cell Line	embryonic stem cell
17	chr11:4117600-4124000	Weak transcription	Fetal Muscle Leg	muscle
18	chr11:4117600-4124200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
19	chr11:4117600-4124600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
20	chr11:4117600-4124800	Weak transcription	Fetal Intestine Small	intestine
21	chr11:4117600-4125200	Weak transcription	Primary neutrophils fromperipheralblood	blood
22	chr11:4117600-4125800	Weak transcription	Liver	Liver
23	chr11:4117600-4126400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
24	chr11:4117600-4126400	Weak transcription	Fetal Intestine Large	intestine
25	chr11:4117600-4126600	Weak transcription	H9 Cell Line	embryonic stem cell
26	chr11:4117600-4126600	Weak transcription	Spleen	Spleen
27	chr11:4117600-4127000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
28	chr11:4117600-4127000	Weak transcription	Rectal Smooth Muscle	rectum
29	chr11:4117600-4127200	Weak transcription	Brain Hippocampus Middle	brain
30	chr11:4117600-4127200	Weak transcription	Placenta Amnion	Placenta Amnion
31	chr11:4117600-4128600	Weak transcription	Brain Substantia Nigra	brain
32	chr11:4117600-4129200	Weak transcription	Brain Cingulate Gyrus	brain
33	chr11:4117600-4129800	Weak transcription	Fetal Heart	heart
34	chr11:4117600-4133000	Weak transcription	Brain Inferior Temporal Lobe	brain
35	chr11:4117600-4137400	Weak transcription	Right Ventricle	heart
36	chr11:4117600-4144600	Weak transcription	HSMMtube	muscle
37	chr11:4117600-4145200	Weak transcription	Gastric	stomach
38	chr11:4117600-4153000	Weak transcription	Stomach Mucosa	stomach
39	chr11:4117800-4123200	Weak transcription	Stomach Smooth Muscle	stomach
40	chr11:4117800-4123200	Weak transcription	Osteobl	bone
41	chr11:4117800-4124000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
42	chr11:4117800-4124200	Weak transcription	Duodenum Mucosa	Duodenum
43	chr11:4117800-4124800	Weak transcription	Primary monocytes fromperipheralblood	blood
44	chr11:4117800-4126400	Weak transcription	Brain Angular Gyrus	brain
45	chr11:4117800-4126400	Weak transcription	Rectal Mucosa Donor 29	rectum
46	chr11:4117800-4126800	Weak transcription	NHLF	lung
47	chr11:4117800-4127000	Weak transcription	Colon Smooth Muscle	Colon
48	chr11:4117800-4147800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
49	chr11:4117800-4160200	Weak transcription	Pancreatic Islets	Pancreatic Islet
50	chr11:4118000-4123800	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links