Variant report

Variant	nsv1053711
Chromosome Location	chr12:30959987-31156297
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:3033)
CpG islands
(count:1527)
Chromatin interactive
region (count:72)
LncRNA
region (count:6)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:3033 , 50 per page) page: 1 2 3 4 5 6 7 ... 61

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr12:30960402-30960728	HepG2	liver:	n/a	n/a
2	ARID3A	chr12:31004235-31004672	HepG2	liver:	n/a	n/a
3	ARID3A	chr12:30960385-30960701	K562	blood:	n/a	n/a
4	ARID3A	chr12:31000205-31000403	K562	blood:	n/a	n/a
5	ATF1	chr12:31004151-31004724	K562	blood:	n/a	n/a
6	ATF1	chr12:31000259-31000452	K562	blood:	n/a	n/a
7	ATF2	chr12:31004199-31004464	H1-hESC	embryonic stem cell:	n/a	n/a
8	ATF2	chr12:31004105-31004862	GM12878	blood:	n/a	n/a
9	ATF2	chr12:31004134-31004752	GM12878	blood:	n/a	n/a
10	ATF3	chr12:31004380-31004732	K562	blood:	n/a	n/a
11	ATF3	chr12:30997485-30997702	H1-hESC	embryonic stem cell:	n/a	n/a
12	ATF3	chr12:31004423-31004766	GM12878	blood:	n/a	n/a
13	ATF3	chr12:31004501-31004709	K562	blood:	n/a	n/a
14	ATF3	chr12:30997473-30997746	GM12878	blood:	n/a	n/a
15	ATF3	chr12:30960342-30960750	K562	blood:	n/a	n/a
16	BACH1	chr12:31004188-31004310	H1-hESC	embryonic stem cell:	n/a	n/a
17	BACH1	chr12:30976034-30976283	H1-hESC	embryonic stem cell:	n/a	n/a
18	BACH1	chr12:30975205-30975733	H1-hESC	embryonic stem cell:	n/a	n/a
19	BACH1	chr12:31058566-31058806	H1-hESC	embryonic stem cell:	n/a	n/a
20	BATF	chr12:31011472-31011728	GM12878	blood:	n/a	n/a
21	BATF	chr12:31000166-31000449	GM12878	blood:	n/a	n/a
22	BATF	chr12:31004050-31004706	GM12878	blood:	n/a	n/a
23	BATF	chr12:31004320-31004658	GM12878	blood:	n/a	n/a
24	BCL11A	chr12:31004230-31004722	GM12878	blood:	n/a	n/a
25	BCL11A	chr12:31133143-31133385	GM12878	blood:	n/a	n/a
26	BCLAF1	chr12:31004100-31004539	GM12878	blood:	n/a	n/a
27	BCLAF1	chr12:31004139-31004547	GM12878	blood:	n/a	n/a
28	BHLHE40	chr12:31143178-31143220	A549	lung:	n/a	n/a
29	BHLHE40	chr12:30997578-30997668	K562	blood:	n/a	n/a
30	BHLHE40	chr12:31004408-31004754	HepG2	liver:	n/a	n/a
31	BHLHE40	chr12:31000346-31000462	K562	blood:	n/a	n/a
32	BHLHE40	chr12:31004212-31004742	HepG2	liver:	n/a	n/a
33	BHLHE40	chr12:31004075-31004746	K562	blood:	n/a	n/a
34	BHLHE40	chr12:31138858-31138979	K562	blood:	n/a	n/a
35	BHLHE40	chr12:30960272-30960571	K562	blood:	n/a	n/a
36	BHLHE40	chr12:30973543-30973784	HepG2	liver:	n/a	n/a
37	BHLHE40	chr12:31019398-31019413	A549	lung:	n/a	n/a
38	BHLHE40	chr12:31004107-31004756	GM12878	blood:	n/a	n/a
39	BRCA1	chr12:30975509-30976068	H1-hESC	embryonic stem cell:	n/a	chr12:30975617-30975626
40	BRCA1	chr12:31064092-31064111	H1-hESC	embryonic stem cell:	n/a	n/a
41	BRCA1	chr12:31000183-31000447	Hela-S3	cervix:	n/a	n/a
42	BRCA1	chr12:30997450-30997677	H1-hESC	embryonic stem cell:	n/a	n/a
43	BRCA1	chr12:30960371-30960762	Hela-S3	cervix:	n/a	n/a
44	BRCA1	chr12:31004156-31004580	Hela-S3	cervix:	n/a	n/a
45	CBX3	chr12:30997373-30997929	HCT-116	colon:	n/a	n/a
46	CBX3	chr12:31000158-31000574	K562	blood:	n/a	n/a
47	CBX3	chr12:31000083-31000589	HCT-116	colon:	n/a	n/a
48	CCNT2	chr12:31015497-31015690	K562	blood:	n/a	n/a
49	CEBPB	chr12:30974767-30975092	K562	blood:	n/a	chr12:30974930-30974941 chr12:30974931-30974942 chr12:30974930-30974943 chr12:30974930-30974943
50	CEBPB	chr12:31085152-31085428	A549	lung:	n/a	chr12:31085248-31085259

(count:1527 , 50 per page) page: 1 2 3 4 5 6 7 ... 31

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr12:31138958-31139008	SKMC	muscle:	n/a
2	chr12:31145469-31145519	HepG2	liver:	n/a
3	chr12:31138958-31139008	SKMC	muscle:	n/a
4	chr12:31145469-31145519	HepG2	liver:	n/a
5	chr12:30976001-30976051	GM06990	blood:	n/a
6	chr12:31079406-31079456	GM12892	blood:	n/a
7	chr12:31138958-31139008	GM12891	blood:	n/a
8	chr12:30976349-30976399	ECC-1	luminal epithelium:	n/a
9	chr12:31078979-31079029	GM12892	blood:	n/a
10	chr12:31079583-31079633	HUVEC	blood vessel:	n/a
11	chr12:30975749-30975799	HEEpiC	esophagus:	n/a
12	chr12:31079583-31079633	PANC-1	pancreas:	n/a
13	chr12:30976001-30976051	AG10803	skin:	n/a
14	chr12:31118985-31119035	K562	blood:	n/a
15	chr12:30976349-30976399	HepG2	liver:	n/a
16	chr12:31079583-31079633	MCF-7	breast:	n/a
17	chr12:31145469-31145519	ProgFib	skin:	n/a
18	chr12:31118985-31119035	AG04449	skin:	fetal
19	chr12:31138958-31139008	Hepatocyte	liver:	n/a
20	chr12:31079583-31079633	K562	blood:	n/a
21	chr12:31083391-31083441	NH-A	brain:	n/a
22	chr12:30978660-30978710	HCF	heart:	n/a
23	chr12:31079694-31079744	HAEpiC	amniotic membrane:	n/a
24	chr12:31149418-31149468	BE2_C	brain:	n/a
25	chr12:30975749-30975799	MCF-7	breast:	n/a
26	chr12:30976001-30976051	ovcar-3	ovarian:	n/a
27	chr12:31083391-31083441	AG04450	lung:	fetal
28	chr12:31145469-31145519	Hela-S3	cervix:	n/a
29	chr12:31130225-31130275	HL-60	blood:	n/a
30	chr12:30976001-30976051	Jurkat	blood:	n/a
31	chr12:31079694-31079744	HCF	heart:	n/a
32	chr12:31130225-31130275	HPAEpiC	pulmonary alveolar:	n/a
33	chr12:31149418-31149468	CMK	blood:	n/a
34	chr12:31149418-31149468	HRPEpiC	eye:	n/a
35	chr12:31130225-31130275	MCF10A-Er-Src	breast:	n/a
36	chr12:30976349-30976399	Hepatocyte	liver:	n/a
37	chr12:31079406-31079456	SAEC	small airway:	n/a
38	chr12:30976867-30976917	GM19239	blood:	n/a
39	chr12:30975363-30975413	HAEpiC	amniotic membrane:	n/a
40	chr12:30975867-30975917	HRPEpiC	eye:	n/a
41	chr12:30971626-30971676	Hepatocyte	liver:	n/a
42	chr12:31130225-31130275	AG04450	lung:	fetal
43	chr12:30971626-30971676	SKMC	muscle:	n/a
44	chr12:30976867-30976917	U87	brain:	n/a
45	chr12:30971626-30971676	MCF-7	breast:	n/a
46	chr12:31079694-31079744	ECC-1	luminal epithelium:	n/a
47	chr12:30975363-30975413	RPTEC	kidney:	n/a
48	chr12:31083391-31083441	ovcar-3	ovarian:	n/a
49	chr12:30976950-30977000	SKMC	muscle:	n/a
50	chr12:30976349-30976399	GM12892	blood:	n/a

(count:72 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr12:31003713..31004456-chr12:31138363..31139354,3	MCF-7	breast:
2	chr12:31114199..31115183-chr12:31138028..31138949,2	MCF-7	breast:
3	chr12:31114199..31115183-chr12:31138028..31138949,2	MCF-7	breast:
4	chr12:31118639..31119261-chr12:31138195..31139078,2	MCF-7	breast:
5	chr12:31082310..31084451-chr12:31104159..31107270,3	MCF-7	breast:
6	chr12:29669971..29670947-chr12:30997067..30997929,2	MCF-7	breast:
7	chr12:31149175..31150805-chr12:31151820..31154429,2	K562	blood:
8	chr12:31122291..31124648-chr12:31129528..31132132,2	K562	blood:
9	chr12:31112508..31114318-chr12:31114721..31117661,2	K562	blood:
10	chr12:31063762..31066653-chr12:31068189..31070611,2	K562	blood:
11	chr12:31149175..31150805-chr12:31151820..31154429,2	K562	blood:
12	chr12:31122020..31124643-chr12:31127496..31129096,2	K562	blood:
13	chr12:31063874..31066002-chr12:31083561..31086374,2	MCF-7	breast:
14	chr12:31048548..31050529-chr12:31126004..31127624,2	MCF-7	breast:
15	chr12:31118586..31119188-chr12:31138566..31139432,2	MCF-7	breast:
16	chr12:30907615..30908171-chr12:30960029..30960907,3	MCF-7	breast:
17	chr12:31108040..31110070-chr12:31110418..31112146,2	K562	blood:
18	chr12:31063874..31066002-chr12:31083561..31086374,2	MCF-7	breast:
19	chr12:31061546..31062526-chr20:26189168..26190012,2	MCF-7	breast:
20	chr12:30999874..31000492-chr12:31398859..31399728,2	K562	blood:
21	chr12:31108040..31110070-chr12:31110418..31112146,2	K562	blood:
22	chr12:30997433..30997938-chr6:16265491..16265991,2	MCF-7	breast:
23	chr12:31020422..31022802-chr12:31024174..31026917,2	MCF-7	breast:
24	chr12:31082310..31084451-chr12:31104159..31107270,3	MCF-7	breast:
25	chr12:31105834..31108432-chr12:31108761..31111175,2	K562	blood:
26	chr12:31121879..31124648-chr12:31129528..31132087,2	K562	blood:
27	chr12:31012779..31013296-chr14:39572481..39573142,2	NB4	blood:
28	chr12:31086101..31088564-chr12:31089320..31090867,2	K562	blood:
29	chr12:29672539..29673136-chr12:30960381..30960998,2	MCF-7	breast:
30	chr12:31012992..31013500-chr14:39572706..39573244,2	MCF-7	breast:
31	chr12:31122020..31124643-chr12:31127496..31129096,2	K562	blood:
32	chr12:31068113..31070208-chr12:31087806..31090681,2	K562	blood:
33	chr12:30978947..30981494-chr12:30984065..30986688,2	K562	blood:
34	chr12:31004147..31004726-chr12:31088536..31089374,2	MCF-7	breast:
35	chr12:31014525..31016857-chr12:31019504..31021645,2	MCF-7	breast:
36	chr12:30970537..30972535-chr12:30974405..30976921,2	K562	blood:
37	chr12:30997537..30998070-chr6:16265472..16265991,2	K562	blood:
38	chr12:31086101..31088564-chr12:31089320..31090867,2	K562	blood:
39	chr12:30985502..30987572-chr12:30990040..30992748,2	MCF-7	breast:
40	chr12:31063762..31066653-chr12:31068189..31070611,2	K562	blood:
41	chr12:31004147..31004726-chr12:31088536..31089374,2	MCF-7	breast:
42	chr12:31020422..31022802-chr12:31024174..31026917,2	MCF-7	breast:
43	chr12:31007128..31008868-chr12:31015958..31017480,2	MCF-7	breast:
44	chr12:31003713..31004456-chr12:31138363..31139354,3	MCF-7	breast:
45	chr12:30919288..30921855-chr12:30972416..30974087,2	K562	blood:
46	chr12:31068113..31070208-chr12:31087806..31090681,2	K562	blood:
47	chr12:31118586..31119188-chr12:31138566..31139432,2	MCF-7	breast:
48	chr12:31113324..31114881-chr12:31120140..31121725,2	K562	blood:
49	chr12:30985502..30987572-chr12:30990040..30992748,2	MCF-7	breast:
50	chr12:31011986..31013519-chr14:39572376..39574186,2	MCF-7	breast:

(count:6 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-TSPAN11-2	chr12:30963492-30963541	NONHSAT027516
2	lnc-CAPRIN2-5	chr12:31076691-31076831	NONHSAT027523
3	lnc-CAPRIN2-5	chr12:31073397-31074125	NONHSAT027523
4	lnc-CAPRIN2-6	chr12:31104861-31104971	ucscGeneNc_uc001rjq_1
5	lnc-CAPRIN2-6	chr12:31117396-31117961	ucscGeneNc_uc001rjq_1
6	lnc-CAPRIN2-6	chr12:31064964-31066230	ucscGeneNc_uc001rjq_1

No data

Variant related genes	Relation type
ENSG00000258118	TF binding region
TSPAN11	TF binding region
ENSG00000258118	CpG island
TSPAN11	CpG island
ENSG00000235884	chromatin interactions
ENSG00000258118	chromatin interactions
ENSG00000100934	chromatin interactions
ENSG00000227195	chromatin interactions
ENSG00000257456	chromatin interactions
ENSG00000246331	chromatin interactions
ENSG00000110888	chromatin interactions

Extended variants
information (count: 7141 )
Associated
traits (count: 66 )

Variant overlapped rSNPs/rCNVs (count:7141 , 50 per page) page: 1 2 3 4 5 6 7 ... 143

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs200950280	chr12:30959991-30959992	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
2	rs570666572	chr12:30960010-30960011	Enhancers Weak transcription Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
3	rs534763383	chr12:30960036-30960037	Enhancers Weak transcription Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
4	rs553126073	chr12:30960046-30960047	Enhancers Weak transcription Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
5	rs7300659	chr12:30960048-30960049	Enhancers Weak transcription Active TSS	Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
6	rs535184398	chr12:30960108-30960109	Enhancers Weak transcription Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
7	rs191818420	chr12:30960138-30960139	Enhancers Weak transcription Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
8	rs371458066	chr12:30960144-30960145	Enhancers Weak transcription Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
9	rs79007513	chr12:30960180-30960181	Enhancers Weak transcription Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
10	rs543716721	chr12:30960186-30960187	Enhancers Weak transcription Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
11	rs79059491	chr12:30960204-30960205	Enhancers ZNF genes & repeats Flanking Active TSS Weak transcription Active TSS Bivalent Enhancer	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
12	rs138023625	chr12:30960237-30960238	Enhancers ZNF genes & repeats Flanking Active TSS Weak transcription Active TSS Bivalent Enhancer	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
13	rs541195376	chr12:30960239-30960240	Enhancers ZNF genes & repeats Flanking Active TSS Weak transcription Active TSS Bivalent Enhancer	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
14	rs559677551	chr12:30960272-30960273	Enhancers ZNF genes & repeats Flanking Active TSS Weak transcription Active TSS Bivalent Enhancer	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
15	rs530242695	chr12:30960273-30960274	Enhancers ZNF genes & repeats Flanking Active TSS Weak transcription Active TSS Bivalent Enhancer	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
16	rs149519681	chr12:30960279-30960280	Enhancers ZNF genes & repeats Flanking Active TSS Weak transcription Active TSS Bivalent Enhancer	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
17	rs561412252	chr12:30960281-30960282	Enhancers ZNF genes & repeats Flanking Active TSS Weak transcription Active TSS Bivalent Enhancer	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
18	rs144108671	chr12:30960324-30960325	Enhancers ZNF genes & repeats Flanking Active TSS Weak transcription Active TSS Bivalent Enhancer	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
19	rs139984252	chr12:30960338-30960339	Enhancers ZNF genes & repeats Flanking Active TSS Weak transcription Active TSS Bivalent Enhancer	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
20	rs141484627	chr12:30960341-30960342	Enhancers ZNF genes & repeats Flanking Active TSS Weak transcription Active TSS Bivalent Enhancer	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
21	rs376598703	chr12:30960400-30960401	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Bivalent Enhancer	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
22	rs377246884	chr12:30960417-30960418	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
23	rs7301387	chr12:30960438-30960439	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS	Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
24	rs146184902	chr12:30960473-30960474	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
25	rs79655834	chr12:30960482-30960483	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
26	rs568138097	chr12:30960483-30960484	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
27	rs535578229	chr12:30960503-30960504	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
28	rs377313390	chr12:30960553-30960554	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
29	rs556741245	chr12:30960595-30960596	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
30	rs35037913	chr12:30960601-30960602	Weak transcription Enhancers ZNF genes & repeats	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
31	rs568838645	chr12:30960604-30960605	Weak transcription Enhancers ZNF genes & repeats	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
32	rs201276595	chr12:30960614-30960615	Weak transcription Enhancers ZNF genes & repeats	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
33	rs35242708	chr12:30960615-30960616	Weak transcription Enhancers ZNF genes & repeats	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
34	rs200454674	chr12:30960616-30960617	Weak transcription Enhancers ZNF genes & repeats	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
35	rs539019458	chr12:30960654-30960655	Weak transcription Enhancers ZNF genes & repeats	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
36	rs558842153	chr12:30960657-30960658	Weak transcription Enhancers ZNF genes & repeats	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
37	rs115690881	chr12:30960676-30960677	Weak transcription Enhancers ZNF genes & repeats	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
38	rs12828652	chr12:30960695-30960696	Weak transcription Enhancers ZNF genes & repeats	Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
39	rs553580378	chr12:30960702-30960703	Weak transcription Enhancers ZNF genes & repeats	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
40	rs574923184	chr12:30960712-30960713	Weak transcription Enhancers ZNF genes & repeats	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
41	rs114598808	chr12:30960726-30960727	Weak transcription Enhancers ZNF genes & repeats	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
42	rs563582438	chr12:30960748-30960749	Weak transcription Enhancers ZNF genes & repeats	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
43	rs57733538	chr12:30960811-30960812	Weak transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
44	rs144337034	chr12:30960852-30960853	Weak transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
45	rs201678442	chr12:30960856-30960857	Weak transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
46	rs562087829	chr12:30960857-30960858	Weak transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
47	rs77418239	chr12:30960858-30960859	Weak transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
48	rs386761689	chr12:30960861-30960862	Weak transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
49	rs58931993	chr12:30960862-30960863	Weak transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
50	rs370852188	chr12:30960865-30960866	Weak transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:66)

Disease	PMID	Source
Chronic lymphocytic leukemia	21546498	CNVD
Myxofibrosarcoma	16751306	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Wilms tumour	21544195	CNVD
Squamous cell cancer	21044232	CNVD
Acute myeloid leukemia	16864856	CNVD
T-cell acute lymphoblastic leukemia	20065082	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Colorectal cancer	20709793	CNVD
Breast cancer	21264507	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Cancer	16751803	CNVD
Testicular cancer	18059402	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Seminomas	18059402	CNVD
Esophageal cancer	21851588	CNVD
Lung cancer	20668451	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Testicular germ cell tumor	18059402	CNVD
Medulloblastoma	21979893	CNVD
Malaria	21533027	CNVD
Chronic lymphocytic leukemia	22228453	CNVD
Basal cell lymphoma	17053054	CNVD
Chronic lymphocytic leukemia	21670202	CNVD
Ewing''s sarcoma	17952124	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Breast cancer	21858162	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Myelodysplastic syndrome	21251322	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Autism	22495311	CNVD
Cancer	20164919	CNVD
small cell lung cancer	20016488	CNVD
Neurodevelopmental disorder	22521361	CNVD
Breast cancer	21509527	CNVD
Follicular lymphoma	18703704	CNVD
Lung cancer	18438408	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Cancer	21129771	CNVD
Hepatocellular carcinoma	16750200	CNVD
Breast cancer	17899364	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Breast cancer	17133270	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Myelofibrosis	22110671	CNVD
microdeletion syndrome	16199537	CNVD
Chordoma	18071362	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Melanoma	20877625	CNVD
Breast cancer	22522925	CNVD
Cancer	20164920	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Non-syndromic sensorineural hearing loss	17289997	CNVD
Ovarian cancer	21720365	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Pancreatic cancer	17952125	CNVD
Sertoli-cell only syndrome	20877625	CNVD

Chromatin state (count:2241 , 50 per page) page: 1 2 3 4 5 6 7 ... 45

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:30950200-30960200	Weak transcription	Brain Inferior Temporal Lobe	brain
2	chr12:30950200-30960200	Weak transcription	Pancreas	Pancrea
3	chr12:30950400-30960000	Weak transcription	HUVEC	blood vessel
4	chr12:30950400-30960200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
5	chr12:30950400-30960200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
6	chr12:30950400-30960200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
7	chr12:30950800-30960200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
8	chr12:30955000-30960200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
9	chr12:30955000-30960200	Weak transcription	Hela-S3	cervix
10	chr12:30955200-30960200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
11	chr12:30955200-30960200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
12	chr12:30955200-30960200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
13	chr12:30955400-30960200	Weak transcription	Osteobl	bone
14	chr12:30956600-30960200	Weak transcription	NH-A	brain
15	chr12:30956600-30964800	Weak transcription	Muscle Satellite Cultured Cells	--
16	chr12:30957400-30960000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
17	chr12:30957400-30960200	Weak transcription	A549	lung
18	chr12:30957600-30960200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
19	chr12:30957600-30960200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
20	chr12:30957600-30966400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
21	chr12:30957800-30960000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
22	chr12:30957800-30960200	Weak transcription	iPS-20b Cell Line	embryonic stem cell
23	chr12:30957800-30960200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
24	chr12:30958000-30960000	Weak transcription	HUES64 Cell Line	embryonic stem cell
25	chr12:30958000-30960200	Weak transcription	H1 Cell Line	embryonic stem cell
26	chr12:30958000-30960400	Enhancers	iPS-15b Cell Line	embryonic stem cell
27	chr12:30958400-30960600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
28	chr12:30958600-30960400	Enhancers	HMEC	breast
29	chr12:30958600-30960600	Enhancers	NHEK	skin
30	chr12:30959200-30960000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
31	chr12:30959200-30966600	Weak transcription	Fetal Kidney	kidney
32	chr12:30959400-30960200	Weak transcription	HUES6 Cell Line	embryonic stem cell
33	chr12:30959600-30960000	Weak transcription	HUES48 Cell Line	embryonic stem cell
34	chr12:30960000-30960200	Enhancers	Liver	Liver
35	chr12:30960000-30960200	Enhancers	Brain Anterior Caudate	brain
36	chr12:30960000-30960200	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
37	chr12:30960000-30960200	Enhancers	HepG2	liver
38	chr12:30960000-30960400	Enhancers	ES-I3 Cell Line	embryonic stem cell
39	chr12:30960000-30960400	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
40	chr12:30960000-30960400	Enhancers	Cortex derived primary cultured neurospheres	brain
41	chr12:30960000-30960600	Enhancers	HUES64 Cell Line	embryonic stem cell
42	chr12:30960000-30960600	Enhancers	iPS-18 Cell Line	embryonic stem cell
43	chr12:30960000-30960600	Enhancers	Fetal Heart	heart
44	chr12:30960000-30960600	Enhancers	HUVEC	blood vessel
45	chr12:30960000-30960600	Active TSS	K562	blood
46	chr12:30960000-30960800	Enhancers	HUES48 Cell Line	embryonic stem cell
47	chr12:30960200-30960400	Enhancers	H1 Cell Line	embryonic stem cell
48	chr12:30960200-30960400	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
49	chr12:30960200-30960400	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
50	chr12:30960200-30960400	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell

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