Variant report

Variant	nsv1054664
Chromosome Location	chr12:11200675-11241520
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:141)
CpG islands
(count:122)
Chromatin interactive
region (count:2)
LncRNA
region (count:3)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:141 , 50 per page) page: 1 2 3

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr12:11224069-11224255	HepG2	liver:	n/a	n/a
2	ATF2	chr12:11237956-11238445	GM12878	blood:	n/a	n/a
3	ATF2	chr12:11238009-11238486	GM12878	blood:	n/a	n/a
4	BATF	chr12:11216721-11217010	GM12878	blood:	n/a	n/a
5	BATF	chr12:11238012-11238373	GM12878	blood:	n/a	n/a
6	BATF	chr12:11225254-11225547	GM12878	blood:	n/a	n/a
7	BATF	chr12:11228218-11228560	GM12878	blood:	n/a	n/a
8	BATF	chr12:11238084-11238352	GM12878	blood:	n/a	n/a
9	BCL11A	chr12:11238061-11238356	GM12878	blood:	n/a	chr12:11238263-11238272
10	BCL11A	chr12:11228248-11228517	GM12878	blood:	n/a	n/a
11	BHLHE40	chr12:11228293-11228667	GM12878	blood:	n/a	n/a
12	CEBPB	chr12:11222658-11222813	HepG2	liver:	n/a	n/a
13	CEBPB	chr12:11226186-11226481	HepG2	liver:	n/a	n/a
14	CEBPB	chr12:11223987-11224332	HepG2	liver:	n/a	n/a
15	CHD2	chr12:11238132-11238304	GM12878	blood:	n/a	n/a
16	CTCF	chr12:11209880-11210030	GM12872	blood:	n/a	n/a
17	CTCF	chr12:11209820-11209970	HEK293	kidney:	n/a	n/a
18	CTCF	chr12:11209740-11209890	HepG2	liver:	n/a	n/a
19	CTCF	chr12:11209700-11209850	MCF-7	breast:	n/a	n/a
20	CTCF	chr12:11209872-11209908	H1-hESC	embryonic stem cell:	n/a	n/a
21	CTCF	chr12:11230498-11230623	Lung_OC	lung:	n/a	n/a
22	CTCF	chr12:11206452-11206523	Kidney_OC	kidney:	n/a	n/a
23	CTCF	chr12:11207523-11207552	GM10248	blood:	n/a	n/a
24	CUX1	chr12:11238241-11238349	GM12878	blood:	n/a	n/a
25	E2F4	chr12:11205619-11205672	MCF10A-Er-Src	breast:	n/a	n/a
26	E2F4	chr12:11220752-11221188	MCF10A-Er-Src	breast:	n/a	n/a
27	EBF1	chr12:11226243-11226583	GM12878	blood:	n/a	chr12:11226441-11226451 chr12:11226441-11226450 chr12:11226439-11226452
28	ELK1	chr12:11201299-11201328	Hela-S3	cervix:	n/a	n/a
29	EP300	chr12:11228364-11228516	GM12878	blood:	n/a	n/a
30	EP300	chr12:11238104-11238440	GM12878	blood:	n/a	n/a
31	EP300	chr12:11238133-11238438	GM12878	blood:	n/a	n/a
32	EP300	chr12:11223962-11224277	HepG2	liver:	n/a	n/a
33	FOXA1	chr12:11223974-11224466	HepG2	liver:	n/a	n/a
34	FOXA1	chr12:11223802-11224380	HepG2	liver:	n/a	n/a
35	FOXA1	chr12:11223913-11224415	HepG2	liver:	n/a	n/a
36	FOXA1	chr12:11223940-11224452	HepG2	liver:	n/a	n/a
37	FOXA2	chr12:11223986-11224245	A549	lung:	n/a	n/a
38	FOXA2	chr12:11223920-11224357	HepG2	liver:	n/a	n/a
39	FOXA2	chr12:11223617-11224724	HepG2	liver:	n/a	n/a
40	FOXM1	chr12:11238005-11238472	GM12878	blood:	n/a	n/a
41	GATA3	chr12:11221936-11222225	MCF-7	breast:	n/a	n/a
42	HDAC2	chr12:11223990-11224345	HepG2	liver:	n/a	n/a
43	IKZF1	chr12:11238336-11238561	GM12878	blood:	n/a	n/a
44	IRF1	chr12:11208646-11208659	K562	blood:	n/a	n/a
45	JUN	chr12:11212501-11212751	HepG2	liver:	n/a	chr12:11212602-11212615
46	JUN	chr12:11209520-11209528	H1-hESC	embryonic stem cell:	n/a	n/a
47	JUND	chr12:11202320-11202631	HepG2	liver:	n/a	chr12:11202474-11202483
48	JUND	chr12:11206169-11206422	HepG2	liver:	n/a	n/a
49	JUND	chr12:11224111-11224296	HepG2	liver:	n/a	n/a
50	JUND	chr12:11212422-11212743	HepG2	liver:	n/a	n/a

(count:122 , 50 per page) page: 1 2 3

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr12:11215083-11215133	GM12892	blood:	n/a
2	chr12:11215083-11215133	HCM	heart:	n/a
3	chr12:11216351-11216401	NB4	blood:	n/a
4	chr12:11216351-11216401	IMR90	lung:	fetal
5	chr12:11216351-11216401	HEK293	kidney:	embryo
6	chr12:11216351-11216401	CMK	blood:	n/a
7	chr12:11216351-11216401	GM06990	blood:	n/a
8	chr12:11216351-11216401	HL-60	blood:	n/a
9	chr12:11216351-11216401	ECC-1	luminal epithelium:	n/a
10	chr12:11215083-11215133	GM12878	blood:	n/a
11	chr12:11216351-11216401	AG09309	skin:	n/a
12	chr12:11215083-11215133	ovcar-3	ovarian:	n/a
13	chr12:11215083-11215133	PANC-1	pancreas:	n/a
14	chr12:11215083-11215133	SK-N-SH_RA	brain:	n/a
15	chr12:11215083-11215133	HUVEC	blood vessel:	n/a
16	chr12:11215083-11215133	AG10803	skin:	n/a
17	chr12:11216351-11216401	HRCEpiC	kidney:	n/a
18	chr12:11215083-11215133	HPAEpiC	pulmonary alveolar:	n/a
19	chr12:11215083-11215133	HepG2	liver:	n/a
20	chr12:11215083-11215133	Caco-2	colon:	n/a
21	chr12:11216351-11216401	HCPEpiC	choroid plexus:	n/a
22	chr12:11215083-11215133	BJ	skin:	n/a
23	chr12:11216351-11216401	A549	lung:	n/a
24	chr12:11216351-11216401	Caco-2	colon:	n/a
25	chr12:11216351-11216401	ProgFib	skin:	n/a
26	chr12:11215083-11215133	BE2_C	brain:	n/a
27	chr12:11215083-11215133	PFSK-1	brain:	n/a
28	chr12:11216351-11216401	AG09319	gingival:	n/a
29	chr12:11216351-11216401	AG10803	skin:	n/a
30	chr12:11216351-11216401	GM12892	blood:	n/a
31	chr12:11216351-11216401	ovcar-3	ovarian:	n/a
32	chr12:11216351-11216401	T-47D	breast:	n/a
33	chr12:11216351-11216401	NT2-D1	testis:	n/a
34	chr12:11216351-11216401	HPAEpiC	pulmonary alveolar:	n/a
35	chr12:11215083-11215133	MCF10A-Er-Src	breast:	n/a
36	chr12:11215083-11215133	SK-N-SH	brain:	n/a
37	chr12:11215083-11215133	AG04449	skin:	fetal
38	chr12:11216351-11216401	HRE	kidney:	n/a
39	chr12:11215083-11215133	HRCEpiC	kidney:	n/a
40	chr12:11216351-11216401	Hela-S3	cervix:	n/a
41	chr12:11216351-11216401	BE2_C	brain:	n/a
42	chr12:11216351-11216401	NHDF-neo	bronchial:	n/a
43	chr12:11216351-11216401	HCT-116	colon:	n/a
44	chr12:11216351-11216401	K562	blood:	n/a
45	chr12:11215083-11215133	T-47D	breast:	n/a
46	chr12:11216351-11216401	HMEC	breast:	n/a
47	chr12:11215083-11215133	NB4	blood:	n/a
48	chr12:11215083-11215133	HAEpiC	amniotic membrane:	n/a
49	chr12:11215083-11215133	IMR90	lung:	fetal
50	chr12:11215083-11215133	MCF-7	breast:	n/a

(count:2 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr12:11237724..11239418-chr12:11252570..11254241,2	MCF-7	breast:
2	chr12:11210669..11211248-chr5:109800405..109801099,2	MCF-7	breast:

(count:3 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-TAS2R46-1	chr12:11200931-11201855	NONHSAT026917
2	lnc-TAS2R43-1	chr12:11229368-11231770	NONHSAT026918
3	lnc-TAS2R43-1	chr12:11229915-11230841	NONHSAT140056

No data

Variant related genes	Relation type
TAS2R46	TF binding region
PRR4	TF binding region
TAS2R63P	TF binding region
TAS2R64P	TF binding region
TAS2R46	CpG island
PRR4	CpG island
TAS2R63P	CpG island
TAS2R64P	CpG island

Extended variants
information (count: 2565 )
Associated
traits (count: 96 )

Variant overlapped rSNPs/rCNVs (count:2565 , 50 per page) page: 1 2 3 4 5 6 7 ... 52

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs528454383	chr12:11200680-11200681	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs367777727	chr12:11200697-11200698	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs151022988	chr12:11200701-11200702	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs61912885	chr12:11200742-11200743	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs200922758	chr12:11200744-11200745	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs145909960	chr12:11200759-11200760	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs543109079	chr12:11200760-11200761	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs374983888	chr12:11200765-11200766	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs140784292	chr12:11200768-11200769	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs377075155	chr12:11200792-11200793	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs371165711	chr12:11200794-11200795	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs66580172	chr12:11200795-11200796	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs375814909	chr12:11200799-11200800	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs367930372	chr12:11200801-11200802	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs537255756	chr12:11200804-11200805	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs370692526	chr12:11200824-11200825	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs556835278	chr12:11200881-11200882	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs183397351	chr12:11200895-11200896	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs539585829	chr12:11200938-11200939	Weak transcription Enhancers Strong transcription	lncRNA	n/a	Overlapped CNVs	n/a
20	rs553079388	chr12:11200955-11200956	Weak transcription Enhancers Strong transcription	lncRNA	n/a	Overlapped CNVs	n/a
21	rs572909807	chr12:11200969-11200970	Weak transcription Enhancers Strong transcription	lncRNA	n/a	Overlapped CNVs	n/a
22	rs2708319	chr12:11201041-11201042	Weak transcription Enhancers Strong transcription ZNF genes & repeats Genic enhancers	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
23	rs555264862	chr12:11201061-11201062	Weak transcription Enhancers Strong transcription ZNF genes & repeats Genic enhancers	lncRNA	n/a	Overlapped CNVs	n/a
24	rs574994316	chr12:11201069-11201070	Weak transcription Enhancers Strong transcription ZNF genes & repeats Genic enhancers	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
25	rs72475500	chr12:11201082-11201083	Weak transcription Enhancers Strong transcription ZNF genes & repeats Genic enhancers	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
26	rs544086597	chr12:11201085-11201086	Weak transcription Enhancers Strong transcription ZNF genes & repeats Genic enhancers	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
27	rs112736790	chr12:11201094-11201095	Weak transcription Enhancers Strong transcription ZNF genes & repeats Genic enhancers	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
28	rs200173754	chr12:11201123-11201124	Weak transcription Enhancers Strong transcription ZNF genes & repeats Genic enhancers	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
29	rs76409562	chr12:11201152-11201153	Weak transcription Enhancers Strong transcription ZNF genes & repeats Genic enhancers	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
30	rs112932572	chr12:11201158-11201159	Weak transcription Enhancers Strong transcription ZNF genes & repeats Genic enhancers	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
31	rs111568930	chr12:11201163-11201164	Weak transcription Enhancers Strong transcription ZNF genes & repeats Genic enhancers	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
32	rs75631087	chr12:11201177-11201178	Weak transcription Enhancers Strong transcription ZNF genes & repeats Genic enhancers	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
33	rs74722400	chr12:11201240-11201241	Weak transcription Strong transcription ZNF genes & repeats Enhancers Genic enhancers	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
34	rs79585868	chr12:11201261-11201262	Weak transcription Strong transcription ZNF genes & repeats Enhancers Genic enhancers	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
35	rs545930328	chr12:11201330-11201331	Weak transcription Strong transcription ZNF genes & repeats Enhancers Genic enhancers	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
36	rs377212111	chr12:11201367-11201368	Weak transcription Strong transcription ZNF genes & repeats Enhancers Genic enhancers	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
37	rs73260727	chr12:11201379-11201380	Weak transcription Strong transcription ZNF genes & repeats Enhancers Genic enhancers	TF binding region lncRNA	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
38	rs74062427	chr12:11201394-11201395	Weak transcription Strong transcription ZNF genes & repeats Enhancers Genic enhancers	TF binding region lncRNA	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
39	rs35062230	chr12:11201410-11201411	Weak transcription Strong transcription ZNF genes & repeats Enhancers	TF binding region lncRNA	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
40	rs141229461	chr12:11201434-11201435	Weak transcription Strong transcription ZNF genes & repeats Enhancers	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
41	rs529692803	chr12:11201451-11201452	Weak transcription Strong transcription ZNF genes & repeats Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
42	rs530752163	chr12:11201484-11201485	Weak transcription Strong transcription ZNF genes & repeats Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
43	rs2597985	chr12:11201487-11201488	Weak transcription Strong transcription ZNF genes & repeats Enhancers	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
44	rs539627998	chr12:11201498-11201499	Weak transcription Strong transcription ZNF genes & repeats Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
45	rs553119945	chr12:11201510-11201511	Weak transcription Strong transcription ZNF genes & repeats Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
46	rs200191076	chr12:11201561-11201562	Weak transcription Strong transcription ZNF genes & repeats Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
47	rs2708391	chr12:11201567-11201568	Weak transcription Strong transcription ZNF genes & repeats Enhancers	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
48	rs535446035	chr12:11201569-11201570	Weak transcription Strong transcription ZNF genes & repeats Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
49	rs2599394	chr12:11201629-11201630	Weak transcription Strong transcription ZNF genes & repeats Enhancers	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
50	rs187705440	chr12:11201661-11201662	Weak transcription Strong transcription ZNF genes & repeats Enhancers	lncRNA	n/a	Overlapped CNVs	n/a

Variant related diseases (count:96)

Disease	PMID	Source
Acute lymphoblastic leukemia	17690704	CNVD
Medulloblastoma	16968546	CNVD
Ovine squamous-cell carcinoma	17599052	CNVD
Hepatocellular carcinoma	16750200	CNVD
T-cell acute lymphoblastic leukemia	20065082	CNVD
Breast cancer	22032731	CNVD
Cancer	21183584	CNVD
Myxofibrosarcoma	16751306	CNVD
Non-small cell lung cancer	21829676	CNVD
Ovarian neoplasms	16753589	CNVD
Prostate cancer	21965145	CNVD
Acute myeloid leukemia	16864856	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Disorders of sex development	21048976	CNVD
Glioblastoma multiforme	21080181	CNVD
Liposarcoma	21253554	CNVD
Prostate cancer	19156837	CNVD
Emphysema	19352772	CNVD
Medulloblastoma	21979893	CNVD
Basal cell lymphoma	17053054	CNVD
Malignant germ cell tumour	17285132	CNVD
Melanoma	18172304	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Wilms tumour	21544195	CNVD
Squamous cell cancer	21044232	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	19960244	CNVD
Endometrial cancer	22040021	CNVD
Colorectal cancer	20709793	CNVD
Breast cancer	21264507	CNVD
Cancer	16751803	CNVD
Testicular cancer	18059402	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Seminomas	18059402	CNVD
Esophageal cancer	21851588	CNVD
Lung cancer	20668451	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Testicular germ cell tumor	18059402	CNVD
Malaria	21533027	CNVD
Chronic lymphocytic leukemia	22228453	CNVD
Chronic lymphocytic leukemia	21670202	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
Ewing''s sarcoma	17952124	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Breast cancer	21858162	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	21785460	CNVD
Myelodysplastic syndrome	21251322	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Autism	22495311	CNVD
Cancer	20164919	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Breast cancer	21364760	CNVD
Breast cancer	21509527	CNVD
Acute myeloid leukemia	21251322	CNVD
Breast cancer	21611746	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Lung cancer	18438408	CNVD
small cell lung cancer	20016488	CNVD
Myelofibrosis	22110671	CNVD
Cutaneous T-cell lymphoma	21881587	CNVD
Squamous cell cancer	19607727	CNVD
Prostate cancer	16573809	CNVD
T-cell acute lymphoblastic leukemia	19406988	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
Glioblastoma multiforme	22286061	CNVD
Acute lymphoblastic leukemia	19100363	CNVD
Acute myeloid leukemia	17268525	CNVD
Acute monocytic leukemia	16498392	CNVD
Prostate cancer	16461572	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Myofibroblastic sarcoma	19369631	CNVD
Breast cancer	17133270	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Ependymoma	18628472	CNVD
Leukemia	18628472	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Ovarian cancer	21720365	CNVD
Melanoma	20877625	CNVD
Ovarian cancer	21781307	CNVD
Acute myeloid leukemia	17237825	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
Breast cancer	22522925	CNVD
Acute myeloid leukemia	20729466	CNVD
Congenital anomalies of the kidney and urinary tract	18316590	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD

Chromatin state (count:432 , 50 per page) page: 1 2 3 4 5 6 7 ... 9

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:11137400-11203000	Weak transcription	Hela-S3	cervix
2	chr12:11166200-11210000	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
3	chr12:11167400-11201800	Weak transcription	Stomach Smooth Muscle	stomach
4	chr12:11168800-11201000	Weak transcription	Colon Smooth Muscle	Colon
5	chr12:11168800-11205800	Weak transcription	Osteobl	bone
6	chr12:11169400-11201600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
7	chr12:11169400-11219400	Weak transcription	HUVEC	blood vessel
8	chr12:11171000-11225600	Weak transcription	HSMMtube	muscle
9	chr12:11174400-11200800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
10	chr12:11175000-11204600	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
11	chr12:11176400-11203000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
12	chr12:11176400-11211200	Weak transcription	Aorta	Aorta
13	chr12:11178400-11201000	Weak transcription	HUES6 Cell Line	embryonic stem cell
14	chr12:11178400-11201000	Weak transcription	Brain Anterior Caudate	brain
15	chr12:11178400-11203400	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
16	chr12:11179000-11201000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
17	chr12:11179000-11203400	Weak transcription	Duodenum Smooth Muscle	Duodenum
18	chr12:11179000-11223800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
19	chr12:11179200-11203200	Weak transcription	Fetal Muscle Trunk	muscle
20	chr12:11179400-11222000	Weak transcription	Fetal Kidney	kidney
21	chr12:11180200-11203200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
22	chr12:11180600-11202600	Weak transcription	Cortex derived primary cultured neurospheres	brain
23	chr12:11181000-11201000	Weak transcription	Brain Cingulate Gyrus	brain
24	chr12:11181000-11201000	Weak transcription	Left Ventricle	heart
25	chr12:11181000-11201000	Weak transcription	Sigmoid Colon	Sigmoid Colon
26	chr12:11181000-11202800	Weak transcription	Skeletal Muscle Female	skeletal muscle
27	chr12:11181000-11203400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
28	chr12:11181000-11217400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
29	chr12:11181000-11220000	Weak transcription	Gastric	stomach
30	chr12:11181000-11224800	Weak transcription	Fetal Stomach	stomach
31	chr12:11181200-11202600	Weak transcription	Fetal Intestine Small	intestine
32	chr12:11181200-11203000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
33	chr12:11181600-11209400	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
34	chr12:11184200-11213000	Weak transcription	Thymus	Thymus
35	chr12:11184800-11201000	Weak transcription	K562	blood
36	chr12:11186200-11203400	Weak transcription	Ovary	ovary
37	chr12:11191000-11201200	Weak transcription	Stomach Mucosa	stomach
38	chr12:11192200-11201000	Weak transcription	Brain Hippocampus Middle	brain
39	chr12:11192400-11201000	Weak transcription	Brain Angular Gyrus	brain
40	chr12:11192400-11202400	Weak transcription	iPS-20b Cell Line	embryonic stem cell
41	chr12:11192600-11203800	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
42	chr12:11193200-11224200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
43	chr12:11194600-11210000	Weak transcription	Primary T killer memory cells from peripheral blood	blood
44	chr12:11195800-11203400	Weak transcription	Fetal Brain Male	brain
45	chr12:11196200-11202800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
46	chr12:11196600-11202800	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
47	chr12:11196600-11211400	Weak transcription	Fetal Heart	heart
48	chr12:11196600-11215000	Weak transcription	NHLF	lung
49	chr12:11196800-11200800	Weak transcription	Brain Inferior Temporal Lobe	brain
50	chr12:11197000-11202600	Weak transcription	Brain Germinal Matrix	brain

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links