Variant report

Variant	nsv1055357
Chromosome Location	chr19:56933632-57190007
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1509)
CpG islands
(count:5678)
Chromatin interactive
region (count:13)
LncRNA
region (count:77)
Mature miRNA
region (count: 0)
miRNA target
sites (count:2)

(count:1509 , 50 per page) page: 1 2 3 4 5 6 7 ... 31

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr19:57178052-57178251	HepG2	liver:	n/a	n/a
2	ARID3A	chr19:57087159-57087355	K562	blood:	n/a	n/a
3	ATF3	chr19:56988997-56989631	H1-hESC	embryonic stem cell:	n/a	n/a
4	BACH1	chr19:57018807-57019161	H1-hESC	embryonic stem cell:	n/a	n/a
5	BACH1	chr19:57164444-57164489	H1-hESC	embryonic stem cell:	n/a	n/a
6	BACH1	chr19:57050354-57050813	H1-hESC	embryonic stem cell:	n/a	n/a
7	BACH1	chr19:57002772-57003159	H1-hESC	embryonic stem cell:	n/a	n/a
8	BACH1	chr19:57078904-57079138	H1-hESC	embryonic stem cell:	n/a	n/a
9	BACH1	chr19:56988129-56989735	H1-hESC	embryonic stem cell:	n/a	n/a
10	BATF	chr19:57005926-57006227	GM12878	blood:	n/a	n/a
11	BATF	chr19:57006008-57006182	GM12878	blood:	n/a	n/a
12	BCL11A	chr19:57005946-57006300	GM12878	blood:	n/a	n/a
13	BHLHE40	chr19:57149399-57149677	GM12878	blood:	n/a	n/a
14	BHLHE40	chr19:56989421-56989451	K562	blood:	n/a	n/a
15	BHLHE40	chr19:57149378-57149666	K562	blood:	n/a	n/a
16	BHLHE40	chr19:57050358-57050446	GM12878	blood:	n/a	n/a
17	BHLHE40	chr19:57078739-57079081	GM12878	blood:	n/a	n/a
18	BRCA1	chr19:57018909-57019098	H1-hESC	embryonic stem cell:	n/a	n/a
19	BRCA1	chr19:57050604-57050791	H1-hESC	embryonic stem cell:	n/a	n/a
20	BRCA1	chr19:57106326-57106395	HepG2	liver:	n/a	n/a
21	BRCA1	chr19:57106394-57107029	Hela-S3	cervix:	n/a	n/a
22	BRCA1	chr19:57009690-57009818	H1-hESC	embryonic stem cell:	n/a	n/a
23	CBX3	chr19:56934943-56935689	K562	blood:	n/a	n/a
24	CBX3	chr19:56934598-56934867	K562	blood:	n/a	n/a
25	CBX3	chr19:57149393-57149628	K562	blood:	n/a	n/a
26	CBX3	chr19:57149369-57149656	K562	blood:	n/a	n/a
27	CEBPB	chr19:57055148-57055531	A549	lung:	n/a	chr19:57055337-57055348
28	CEBPB	chr19:57055209-57055487	H1-hESC	embryonic stem cell:	n/a	chr19:57055337-57055348
29	CEBPB	chr19:57179707-57179830	HepG2	liver:	n/a	chr19:57179789-57179800
30	CEBPB	chr19:57126918-57127189	IMR90	lung:	n/a	n/a
31	CEBPB	chr19:56989289-56990099	IMR90	lung:	n/a	chr19:56989652-56989661 chr19:56989652-56989661 chr19:56989652-56989661
32	CEBPB	chr19:56935273-56935539	A549	lung:	n/a	chr19:56935376-56935387
33	CEBPB	chr19:56989368-56989798	H1-hESC	embryonic stem cell:	n/a	chr19:56989652-56989661 chr19:56989652-56989661 chr19:56989652-56989661
34	CEBPB	chr19:57034280-57034480	HepG2	liver:	n/a	chr19:57034405-57034416
35	CEBPB	chr19:56980070-56980184	HepG2	liver:	n/a	chr19:56980115-56980126
36	CEBPB	chr19:57018866-57019252	IMR90	lung:	n/a	n/a
37	CEBPB	chr19:57126941-57127088	HepG2	liver:	n/a	n/a
38	CEBPB	chr19:56935297-56935563	K562	blood:	n/a	chr19:56935376-56935387
39	CEBPB	chr19:57091770-57091950	IMR90	lung:	n/a	n/a
40	CEBPB	chr19:57184000-57184142	HepG2	liver:	n/a	chr19:57184074-57184085 chr19:57184074-57184087 chr19:57184076-57184087 chr19:57184076-57184085 chr19:57184074-57184087
41	CEBPB	chr19:56989481-56989788	A549	lung:	n/a	chr19:56989652-56989661 chr19:56989652-56989661 chr19:56989652-56989661
42	CEBPB	chr19:56989489-56989808	HepG2	liver:	n/a	chr19:56989652-56989661 chr19:56989652-56989661 chr19:56989652-56989661
43	CEBPB	chr19:57002828-57003033	IMR90	lung:	n/a	chr19:57002892-57002904
44	CEBPB	chr19:57183981-57184245	A549	lung:	n/a	chr19:57184074-57184085 chr19:57184074-57184087 chr19:57184076-57184087 chr19:57184076-57184085 chr19:57184074-57184087
45	CEBPB	chr19:57055126-57055622	A549	lung:	n/a	chr19:57055337-57055348
46	CEBPB	chr19:57126859-57127081	A549	lung:	n/a	n/a
47	CEBPB	chr19:57091781-57091946	A549	lung:	n/a	n/a
48	CEBPB	chr19:56954724-56954779	H1-hESC	embryonic stem cell:	n/a	chr19:56954765-56954776
49	CEBPB	chr19:57055163-57055521	HepG2	liver:	n/a	chr19:57055337-57055348
50	CEBPB	chr19:57055191-57055492	K562	blood:	n/a	chr19:57055337-57055348

(count:5678 , 50 per page) page: 1 2 3 4 5 6 7 ... 114

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr19:57149436-57149486	HEEpiC	esophagus:	n/a
2	chr19:57079146-57079196	NH-A	brain:	n/a
3	chr19:57109049-57109099	NHDF-neo	bronchial:	n/a
4	chr19:57149563-57149613	GM19239	blood:	n/a
5	chr19:57078442-57078492	Hela-S3	cervix:	n/a
6	chr19:57149436-57149486	HEEpiC	esophagus:	n/a
7	chr19:57079146-57079196	NH-A	brain:	n/a
8	chr19:57109049-57109099	NHDF-neo	bronchial:	n/a
9	chr19:57149563-57149613	GM19239	blood:	n/a
10	chr19:57078442-57078492	Hela-S3	cervix:	n/a
11	chr19:57103802-57103852	NHDF-neo	bronchial:	n/a
12	chr19:57079381-57079431	SKMC	muscle:	n/a
13	chr19:56953293-56953343	ECC-1	luminal epithelium:	n/a
14	chr19:57179660-57179710	HRCEpiC	kidney:	n/a
15	chr19:56951840-56951890	PrEC	prostate:	n/a
16	chr19:56988806-56988856	HPAEpiC	pulmonary alveolar:	n/a
17	chr19:57079381-57079431	AoSMC	blood vessel:	n/a
18	chr19:57175043-57175093	HMEC	breast:	n/a
19	chr19:57018848-57018898	NB4	blood:	n/a
20	chr19:57050367-57050417	AG04449	skin:	fetal
21	chr19:57183268-57183318	GM12892	blood:	n/a
22	chr19:57109049-57109099	HUVEC	blood vessel:	n/a
23	chr19:57050359-57050409	GM19239	blood:	n/a
24	chr19:57019005-57019055	HPAEpiC	pulmonary alveolar:	n/a
25	chr19:57185512-57185562	HL-60	blood:	n/a
26	chr19:57079381-57079431	GM12892	blood:	n/a
27	chr19:56951840-56951890	GM06990	blood:	n/a
28	chr19:57137116-57137166	AG10803	skin:	n/a
29	chr19:57185512-57185562	AoSMC	blood vessel:	n/a
30	chr19:57149813-57149863	Hela-S3	cervix:	n/a
31	chr19:57078173-57078223	AG09309	skin:	n/a
32	chr19:56953293-56953343	SKMC	muscle:	n/a
33	chr19:56989812-56989862	Hela-S3	cervix:	n/a
34	chr19:57019279-57019329	SK-N-MC	brain:	n/a
35	chr19:56953293-56953343	HMEC	breast:	n/a
36	chr19:57137116-57137166	ovcar-3	ovarian:	n/a
37	chr19:56989740-56989790	NHDF-neo	bronchial:	n/a
38	chr19:57106852-57106902	NHBE	bronchial:	n/a
39	chr19:57050834-57050884	GM06990	blood:	n/a
40	chr19:57155294-57155344	SKMC	muscle:	n/a
41	chr19:57185038-57185088	HAEpiC	amniotic membrane:	n/a
42	chr19:57105832-57105882	BE2_C	brain:	n/a
43	chr19:57175062-57175112	K562	blood:	n/a
44	chr19:57078765-57078815	Hepatocyte	liver:	n/a
45	chr19:57049530-57049580	CMK	blood:	n/a
46	chr19:56989102-56989152	HEK293	kidney:	embryo
47	chr19:57091383-57091433	LNCaP	prostate:	n/a
48	chr19:57052834-57052884	CMK	blood:	n/a
49	chr19:57046713-57046763	GM12878	blood:	n/a
50	chr19:57078727-57078777	HCF	heart:	n/a

(count:13 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr19:56936048..56937864-chr19:56941808..56944058,2	K562	blood:
2	chr19:57130300..57133010-chr19:57135444..57137071,2	K562	blood:
3	chr19:56936048..56937864-chr19:56941808..56944058,2	K562	blood:
4	chr19:57106673..57107322-chr21:27106852..27107481,2	Hela-S3	cervix:
5	chr11:65658617..65659346-chr19:57117182..57118018,2	MCF-7	breast:
6	chr19:57002795..57005630-chr19:57006374..57008169,2	MCF-7	breast:
7	chr19:56936048..56938748-chr19:56941808..56944257,2	K562	blood:
8	chr19:56978548..56980333-chr19:56983464..56985765,2	K562	blood:
9	chr19:57019659..57020659-chr6:103890104..103890604,2	MCF-7	breast:
10	chr19:57002795..57005630-chr19:57006374..57008169,2	MCF-7	breast:
11	chr19:56653240..56655225-chr19:56994034..56995574,2	K562	blood:
12	chr19:56936048..56938748-chr19:56941808..56944257,2	K562	blood:
13	chr19:57130300..57133010-chr19:57135444..57137071,2	K562	blood:

(count:77 , 50 per page) page: 1 2

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-ZNF470-3	chr19:57112875-57112959	NONHSAT068178
2	lnc-ZNF471-1	chr19:57050994-57051085	NONHSAT068172
3	lnc-ZNF667-3	chr19:57049622-57049744	ENSG00000267421.2
4	lnc-ZNF835-3	chr19:57101328-57101649	NONHSAT068177
5	lnc-AC004696.1-1	chr19:56989526-56989645	ENSG00000166770.6
6	lnc-ZNF667-3	chr19:57049617-57049684	ENSG00000267421.2
7	lnc-ZNF667-3	chr19:57047527-57047701	ENSG00000267421.2
8	lnc-AC004696.1-1	chr19:56989559-56989746	ENSG00000166770.6
9	lnc-ZNF582-2	chr19:56979088-56980304	ENSG00000250660
10	lnc-ZNF470-1	chr19:57086007-57086102	NONHSAT068176
11	lnc-AC004696.1-1	chr19:57005532-57005711	ENSG00000166770.6
12	lnc-ZNF667-3	chr19:57049020-57049106	ENSG00000267421.2
13	lnc-AC004696.1-1	chr19:56989609-56989662	ENSG00000166770.6
14	lnc-ZNF71-4	chr19:57166161-57166231	ucscGeneNc_uc002pyb_1
15	lnc-AC004696.1-1	chr19:57005532-57005676	ENSG00000166770.6
16	lnc-ZNF470-3	chr19:57121333-57121911	NONHSAT068178
17	lnc-ZNF71-4	chr19:57171196-57171409	ucscGeneNc_uc002pyb_1
18	lnc-ZNF667-3	chr19:57049726-57049787	ENSG00000267421.2
19	lnc-AC004696.1-1	chr19:56989552-56989645	ENSG00000166770.6
20	lnc-ZNF667-3	chr19:57049020-57049106	ENSG00000267421.2
21	lnc-ZNF667-2	chr19:57056935-57058640	ENSG00000245443
22	lnc-ZNF667-2	chr19:57078442-57078833	NONHSAT068173
23	lnc-AC004696.1-1	chr19:56989552-56989645	ENSG00000166770.6
24	lnc-AC004696.1-1	chr19:56988619-56990056	ENSG00000166770.6
25	lnc-AC004696.1-1	chr19:57005532-57005711	ENSG00000166770.6
26	lnc-ZNF667-3	chr19:57049794-57049944	ENSG00000267421.2
27	lnc-ZNF470-3	chr19:57106703-57106796	NONHSAT068178
28	lnc-AC004696.1-1	chr19:57005532-57005696	ENSG00000166770.6
29	lnc-ZNF582-2	chr19:56983068-56983553	ENSG00000250660
30	lnc-ZNF667-2	chr19:57056297-57058640	NONHSAT068173
31	lnc-AC004696.1-1	chr19:56989243-56989750	NONHSAT068156
32	lnc-ZNF667-2	chr19:57078442-57078780	ENSG00000269696.1
33	lnc-ZNF835-1	chr19:57183942-57185269	ENSG00000268568.1
34	lnc-ZFP28-2	chr19:57021466-57021682	NONHSAT068165
35	lnc-ZNF667-3	chr19:57049017-57049800	ENSG00000267421.2
36	lnc-ZNF470-1	chr19:57080127-57080252	NONHSAT068176
37	lnc-AC004696.1-1	chr19:56989493-56989645	NONHSAT068157
38	lnc-ZNF470-1	chr19:57099594-57099774	NONHSAT068176
39	lnc-AC004696.1-1	chr19:57002946-57003135	ENSG00000166770.6
40	lnc-ZNF71-4	chr19:57171038-57171133	ucscGeneNc_uc002pyb_1
41	lnc-ZNF471-1	chr19:57055905-57056106	NONHSAT068172
42	lnc-ZNF71-1	chr19:57167576-57168614	NONHSAT068183
43	lnc-AC004696.1-1	chr19:56988972-56989294	ENSG00000166770.6
44	lnc-AC004696.1-1	chr19:57005532-57005688	ENSG00000166770.6
45	lnc-AC004696.1-1	chr19:57005532-57005972	ENSG00000166770.6
46	lnc-AC004696.1-1	chr19:57005532-57005711	ENSG00000166770.6
47	lnc-ZNF582-2	chr19:56985381-56987270	ENSG00000250660
48	lnc-ZFP28-2	chr19:57037069-57037390	NONHSAT068165
49	lnc-AC004696.1-1	chr19:57005532-57006805	NONHSAT068157
50	lnc-AC004696.1-1	chr19:57002946-57003135	ENSG00000166770.6

No data

(count:2 , 50 per page) page: 1

No.	miRNA target gene	miRNA name	Chromosome Location	mirBase accession
1	ZFP28	hsa-miR-335-5p	chr19:57063009-57063035
2	ZNF71	hsa-miR-193b-3p	chr19:57134816-57134837

Variant related genes	Relation type
ENSG00000267421	TF binding region
ZNF835	TF binding region
ZNF667	TF binding region
ZNF471	TF binding region
ZNF583	TF binding region
ENSG00000269696	TF binding region
ENSG00000267224	TF binding region
ENSG00000268352	TF binding region
ENSG00000268036	TF binding region
ZFP28	TF binding region
ZNF470	TF binding region
ZNF667-AS1	TF binding region
ZNF71	TF binding region
SIGLEC31P	TF binding region
ENSG00000268568	TF binding region
SMIM17	TF binding region
ENSG00000267421	CpG island
ZNF835	CpG island
ZNF667	CpG island
ZNF471	CpG island
ZNF583	CpG island
ENSG00000269696	CpG island
ENSG00000267224	CpG island
ENSG00000268352	CpG island
ENSG00000268036	CpG island
ZFP28	CpG island
ZNF470	CpG island
ZNF667-AS1	CpG island
ZNF71	CpG island
SIGLEC31P	CpG island
ENSG00000268568	CpG island
SMIM17	CpG island
ENSG00000198046	chromatin interactions
ENSG00000167685	chromatin interactions
ENSG00000154723	chromatin interactions
ENSG00000154727	chromatin interactions
TMEM194A	miRNA target sites
IKBIP	miRNA target sites
TKT	miRNA target sites
BRCA1	miRNA target sites
PIR	miRNA target sites
EIF4E	miRNA target sites
TNRC6A	miRNA target sites

Extended variants
information (count: 9879 )
Associated
traits (count: 77 )

Variant overlapped rSNPs/rCNVs (count:9879 , 50 per page) page: 1 2 3 4 5 6 7 ... 198

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs549462953	chr19:56933634-56933635	ZNF genes & repeats Strong transcription Weak transcription Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
2	rs569367821	chr19:56933652-56933653	ZNF genes & repeats Strong transcription Weak transcription Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
3	rs535549398	chr19:56933656-56933657	ZNF genes & repeats Strong transcription Weak transcription Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
4	rs188447884	chr19:56933689-56933690	ZNF genes & repeats Strong transcription Weak transcription Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
5	rs375989933	chr19:56933723-56933724	ZNF genes & repeats Strong transcription Weak transcription Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
6	rs192660766	chr19:56933763-56933764	ZNF genes & repeats Strong transcription Weak transcription Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
7	rs558527960	chr19:56933789-56933790	ZNF genes & repeats Strong transcription Weak transcription Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
8	rs578213118	chr19:56933790-56933791	ZNF genes & repeats Strong transcription Weak transcription Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
9	rs543985272	chr19:56933858-56933859	ZNF genes & repeats Strong transcription Weak transcription Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
10	rs917651	chr19:56933864-56933865	ZNF genes & repeats Strong transcription Weak transcription Active TSS	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
11	rs113100707	chr19:56933969-56933970	ZNF genes & repeats Strong transcription Weak transcription Active TSS	TF binding region	1 gene(s)	Overlapped CNVs	n/a
12	rs917652	chr19:56934111-56934112	ZNF genes & repeats Strong transcription Weak transcription	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
13	rs569106783	chr19:56934165-56934166	ZNF genes & repeats Strong transcription Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
14	rs368236846	chr19:56934236-56934237	ZNF genes & repeats Strong transcription Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
15	rs543128433	chr19:56934242-56934243	ZNF genes & repeats Strong transcription Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
16	rs140299736	chr19:56934275-56934276	ZNF genes & repeats Strong transcription Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
17	rs144022660	chr19:56934297-56934298	ZNF genes & repeats Strong transcription Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
18	rs377763190	chr19:56934303-56934304	ZNF genes & repeats Strong transcription Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
19	rs200582911	chr19:56934311-56934312	ZNF genes & repeats Strong transcription Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
20	rs573224078	chr19:56934334-56934335	ZNF genes & repeats Strong transcription Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
21	rs146849700	chr19:56934335-56934336	ZNF genes & repeats Strong transcription Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
22	rs115643050	chr19:56934360-56934361	ZNF genes & repeats Strong transcription Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
23	rs371188945	chr19:56934390-56934391	ZNF genes & repeats Strong transcription Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
24	rs564086289	chr19:56934436-56934437	ZNF genes & repeats Strong transcription Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
25	rs533061271	chr19:56934445-56934446	ZNF genes & repeats Strong transcription Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
26	rs375785771	chr19:56934481-56934482	ZNF genes & repeats Strong transcription Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
27	rs116521358	chr19:56934488-56934489	ZNF genes & repeats Strong transcription Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
28	rs563516472	chr19:56934489-56934490	ZNF genes & repeats Strong transcription Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
29	rs202014218	chr19:56934512-56934513	ZNF genes & repeats Strong transcription Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
30	rs140107379	chr19:56934522-56934523	ZNF genes & repeats Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs377278294	chr19:56934552-56934553	ZNF genes & repeats Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs143763777	chr19:56934554-56934555	ZNF genes & repeats Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs148178582	chr19:56934582-56934583	ZNF genes & repeats Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs372122541	chr19:56934600-56934601	ZNF genes & repeats Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs141090852	chr19:56934608-56934609	ZNF genes & repeats Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs534658257	chr19:56934626-56934627	ZNF genes & repeats Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs374933168	chr19:56934641-56934642	ZNF genes & repeats Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs370578438	chr19:56934726-56934727	ZNF genes & repeats Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs551397864	chr19:56934747-56934748	ZNF genes & repeats Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs375581246	chr19:56934750-56934751	ZNF genes & repeats Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs200724967	chr19:56934770-56934771	ZNF genes & repeats Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs192530067	chr19:56934777-56934778	ZNF genes & repeats Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs116332236	chr19:56934795-56934796	ZNF genes & repeats Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs139008458	chr19:56934816-56934817	ZNF genes & repeats Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs200558791	chr19:56934915-56934916	ZNF genes & repeats Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs530539800	chr19:56934951-56934952	ZNF genes & repeats Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs12976916	chr19:56934996-56934997	ZNF genes & repeats Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs12976917	chr19:56934997-56934998	ZNF genes & repeats Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs374554454	chr19:56935022-56935023	ZNF genes & repeats Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs550576809	chr19:56935117-56935118	ZNF genes & repeats Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:77)

Disease	PMID	Source
Myelodysplastic syndrome	17634407	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Cancer	21637783	CNVD
Retinoblastoma	21504564	CNVD
Medulloblastoma	21979893	CNVD
Ovarian cancer	21720365	CNVD
Cancer	20164919	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Prostate cancer	18632612	CNVD
Ductal carcinoma	22052326	CNVD
Congenital nephrotic syndrome	18421352	CNVD
Astrocytoma	17934521	CNVD
Leukemia	17361228	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Breast cancer	17603634	CNVD
Glioma	21971842	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Endometrial cancer	22040021	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Oligodendroglial tumors	17285580	CNVD
renal disease	20603712	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Salivary gland adenoid cystic carcinoma	17545515	CNVD
Breast cancer	16608533	CNVD
Neuroblastoma	18923191	CNVD
Chordoma	18071362	CNVD
Urothelial carcinoma	21177765	CNVD
Metanephric adenoma	20802469	CNVD
Acute myeloid leukemia	16864856	CNVD
Bladder cancer	21909424	CNVD
Medulloblastoma	16783165	CNVD
Acute myeloid leukemia	20729466	CNVD
Ovarian cancer	22174824	CNVD
Multiple myeloma	16616336	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Wilms tumour	21544195	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Congenital anomalies of the kidney and urinary tract	18852474	CNVD
Glioblastoma multiforme	17002787	CNVD
Cervical cancer	21062161	CNVD
Primary central nervous system lymphoma	21088137	CNVD
Prostate cancer	16573809	CNVD
small cell lung cancer	20016488	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Lung cancer	18438408	CNVD
Colorectal cancer	16272173	CNVD
Ovarian cancer	21781307	CNVD
Neuroblastoma	20406844	CNVD
Breast cancer	21785460	CNVD
Myelofibrosis	22110671	CNVD
T-cell acute lymphoblastic leukemia	19406988	CNVD
Alzheimer''s disease	22166940	CNVD
Heart disease	21282601	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Glioblastoma multiforme	21922591	CNVD
Non-syndromic sensorineural hearing loss	18496225	CNVD
Basal cell lymphoma	19029149	CNVD
Diffuse large b-cell lymphoma	19029149	CNVD
Breast cancer	20409316	CNVD
Non-syndromic sensorineural hearing loss	17289997	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Lung cancer	20668451	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD
early-passage human iPS cells	21368824	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD

Chromatin state (count:6327 , 50 per page) page: 1 2 3 4 5 6 7 ... 127

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:56916000-56938600	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
2	chr19:56916400-56936600	ZNF genes & repeats	Brain Germinal Matrix	brain
3	chr19:56916400-56956000	ZNF genes & repeats	Liver	Liver
4	chr19:56916600-56935600	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Female	--
5	chr19:56916600-56956000	ZNF genes & repeats	Duodenum Smooth Muscle	Duodenum
6	chr19:56916800-56936200	ZNF genes & repeats	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
7	chr19:56916800-56936200	ZNF genes & repeats	H9 Derived Neuron Cultured Cells	ES cell derived
8	chr19:56917000-56937000	ZNF genes & repeats	Fetal Lung	lung
9	chr19:56917000-56938800	ZNF genes & repeats	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
10	chr19:56917000-56940000	ZNF genes & repeats	Monocytes-CD14+_RO01746	blood
11	chr19:56917200-56935800	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--
12	chr19:56917200-56936600	ZNF genes & repeats	Cortex derived primary cultured neurospheres	brain
13	chr19:56917200-56936600	ZNF genes & repeats	Pancreatic Islets	Pancreatic Islet
14	chr19:56917200-56937600	ZNF genes & repeats	Fetal Brain Female	brain
15	chr19:56917400-56944800	ZNF genes & repeats	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
16	chr19:56917600-56939400	ZNF genes & repeats	Primary T cells from cord blood	blood
17	chr19:56918200-56935000	ZNF genes & repeats	Primary T cells fromperipheralblood	blood
18	chr19:56918200-56936000	ZNF genes & repeats	Breast Myoepithelial Primary Cells	Breast
19	chr19:56918200-56937600	ZNF genes & repeats	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
20	chr19:56918200-56938400	ZNF genes & repeats	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
21	chr19:56918200-56940000	ZNF genes & repeats	Primary T regulatory cells fromperipheralblood	blood
22	chr19:56918200-56940600	ZNF genes & repeats	Primary T helper cells fromperipheralblood	blood
23	chr19:56918200-56943400	ZNF genes & repeats	Brain Anterior Caudate	brain
24	chr19:56918400-56935200	ZNF genes & repeats	Primary B cells from peripheral blood	blood
25	chr19:56918400-56935600	ZNF genes & repeats	Primary neutrophils fromperipheralblood	blood
26	chr19:56918400-56936600	ZNF genes & repeats	HUES64 Cell Line	embryonic stem cell
27	chr19:56918400-56938600	ZNF genes & repeats	Brain Hippocampus Middle	brain
28	chr19:56918400-56942800	ZNF genes & repeats	Primary T helper cells PMA-I stimulated	--
29	chr19:56918400-56945400	ZNF genes & repeats	Adipose Nuclei	Adipose
30	chr19:56926200-56934200	Weak transcription	Fetal Thymus	thymus
31	chr19:56927800-56936400	ZNF genes & repeats	iPS-20b Cell Line	embryonic stem cell
32	chr19:56928000-56935800	ZNF genes & repeats	Primary hematopoietic stem cells	blood
33	chr19:56928000-56935800	ZNF genes & repeats	Dnd41	blood
34	chr19:56928000-56936000	ZNF genes & repeats	Primary T cells effector/memory enriched fromperipheralblood	blood
35	chr19:56928000-56936000	ZNF genes & repeats	Stomach Smooth Muscle	stomach
36	chr19:56928000-56936200	ZNF genes & repeats	Primary T killer naive cells fromperipheralblood	blood
37	chr19:56928000-56936600	ZNF genes & repeats	Fetal Kidney	kidney
38	chr19:56928200-56939800	ZNF genes & repeats	Primary T helper memory cells from peripheral blood 1	blood
39	chr19:56928400-56937800	ZNF genes & repeats	Primary T helper naive cells fromperipheralblood	blood
40	chr19:56929200-56936600	ZNF genes & repeats	Skeletal Muscle Female	skeletal muscle
41	chr19:56930800-56935600	ZNF genes & repeats	Ovary	ovary
42	chr19:56930800-56937000	ZNF genes & repeats	HSMM	muscle
43	chr19:56931000-56934600	Strong transcription	Placenta	Placenta
44	chr19:56931000-56934800	Weak transcription	Pancreas	Pancrea
45	chr19:56931000-56938000	ZNF genes & repeats	Rectal Mucosa Donor 29	rectum
46	chr19:56931200-56935800	ZNF genes & repeats	Primary B cells from cord blood	blood
47	chr19:56931200-56937600	ZNF genes & repeats	Primary T helper memory cells from peripheral blood 2	blood
48	chr19:56931200-56944400	ZNF genes & repeats	Brain Substantia Nigra	brain
49	chr19:56931400-56935800	ZNF genes & repeats	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
50	chr19:56931400-56935800	ZNF genes & repeats	Primary hematopoietic stem cells short term culture	blood

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