Variant report

Variant	nsv1055423
Chromosome Location	chr19:53524199-53569196
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:169)
CpG islands
(count:855)
Chromatin interactive
region (count:10)
LncRNA
region (count:1)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:169 , 50 per page) page: 1 2 3 4

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ATF1	chr19:53558916-53559216	K562	blood:	n/a	n/a
2	ATF3	chr19:53558902-53559223	K562	blood:	n/a	n/a
3	BHLHE40	chr19:53558384-53558600	K562	blood:	n/a	n/a
4	BRCA1	chr19:53548078-53548353	H1-hESC	embryonic stem cell:	n/a	n/a
5	CBX3	chr19:53556503-53556768	K562	blood:	n/a	n/a
6	CEBPB	chr19:53563457-53563536	A549	lung:	n/a	chr19:53563503-53563514
7	CEBPB	chr19:53563196-53563210	HepG2	liver:	n/a	n/a
8	CEBPB	chr19:53563520-53563530	HepG2	liver:	n/a	n/a
9	CEBPB	chr19:53563501-53563543	K562	blood:	n/a	chr19:53563503-53563514
10	CEBPB	chr19:53559033-53559111	K562	blood:	n/a	n/a
11	CTBP2	chr19:53561350-53561890	H1-hESC	embryonic stem cell:	n/a	n/a
12	CTCF	chr19:53532720-53532870	HCFaa	heart:	n/a	n/a
13	CTCF	chr19:53541320-53541470	HCPEpiC	choroid plexus:	n/a	n/a
14	CTCF	chr19:53554569-53554639	Lung_OC	lung:	n/a	n/a
15	CTCF	chr19:53547820-53547970	GM12875	blood:	n/a	n/a
16	CTCF	chr19:53538670-53538733	GM10248	blood:	n/a	n/a
17	CTCF	chr19:53550349-53550463	GM10248	blood:	n/a	n/a
18	CTCF	chr19:53550380-53550387	GM20000	blood:	n/a	n/a
19	CTCF	chr19:53531550-53531621	Lung_OC	lung:	n/a	n/a
20	E2F6	chr19:53561157-53562059	H1-hESC	embryonic stem cell:	n/a	chr19:53561806-53561815 chr19:53561465-53561477
21	E2F6	chr19:53560756-53562126	H1-hESC	embryonic stem cell:	n/a	chr19:53561806-53561815 chr19:53561465-53561477
22	ELF1	chr19:53540937-53541300	K562	blood:	n/a	chr19:53541131-53541144
23	ELF1	chr19:53541076-53541260	K562	blood:	n/a	chr19:53541131-53541144
24	ELF1	chr19:53558677-53558961	K562	blood:	n/a	chr19:53558841-53558854
25	FOXA1	chr19:53531685-53532097	HepG2	liver:	n/a	n/a
26	GABPA	chr19:53540806-53541360	SK-N-SH	brain:	n/a	chr19:53541216-53541225
27	GABPA	chr19:53540899-53541402	SK-N-SH	brain:	n/a	chr19:53541216-53541225
28	GATA2	chr19:53531508-53531857	K562	blood:	n/a	n/a
29	GATA3	chr19:53567408-53567594	SH-SY5Y	brain:	n/a	n/a
30	GTF2F1	chr19:53561339-53561881	H1-hESC	embryonic stem cell:	n/a	n/a
31	HCFC1	chr19:53541108-53541266	K562	blood:	n/a	n/a
32	JUN	chr19:53558898-53559215	HepG2	liver:	n/a	chr19:53559056-53559069
33	JUN	chr19:53558884-53559227	K562	blood:	n/a	chr19:53559056-53559069
34	JUND	chr19:53538261-53538608	HepG2	liver:	n/a	chr19:53538334-53538344 chr19:53538334-53538344 chr19:53538334-53538344 chr19:53538441-53538450
35	JUND	chr19:53558870-53559233	K562	blood:	n/a	n/a
36	JUND	chr19:53558876-53559222	HepG2	liver:	n/a	n/a
37	KAP1	chr19:53551114-53551396	K562	blood:	n/a	n/a
38	KAP1	chr19:53524473-53524819	HEK293	kidney:	n/a	n/a
39	MAFF	chr19:53559027-53559089	K562	blood:	n/a	n/a
40	MAFK	chr19:53545772-53545991	HepG2	liver:	n/a	chr19:53545877-53545892
41	MAFK	chr19:53545762-53546003	HepG2	liver:	n/a	chr19:53545877-53545892
42	MAX	chr19:53560887-53561953	H1-hESC	embryonic stem cell:	n/a	n/a
43	MAX	chr19:53561534-53561840	ECC-1	luminal epithelium:	n/a	n/a
44	MAX	chr19:53561065-53562005	H1-hESC	embryonic stem cell:	n/a	n/a
45	MAX	chr19:53558297-53558546	K562	blood:	n/a	n/a
46	MAX	chr19:53560809-53562002	H1-hESC	embryonic stem cell:	n/a	n/a
47	MAX	chr19:53547753-53548028	K562	blood:	n/a	n/a
48	MAX	chr19:53561468-53561930	ECC-1	luminal epithelium:	n/a	n/a
49	MAZ	chr19:53540719-53541424	IMR90	lung:	n/a	n/a
50	MAZ	chr19:53541193-53541206	K562	blood:	n/a	n/a

(count:855 , 50 per page) page: 1 2 3 4 5 6 7 ... 18

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr19:53564251-53564301	GM06990	blood:	n/a
2	chr19:53564251-53564301	GM06990	blood:	n/a
3	chr19:53561973-53562023	A549	lung:	n/a
4	chr19:53541287-53541337	AoSMC	blood vessel:	n/a
5	chr19:53561386-53561436	BE2_C	brain:	n/a
6	chr19:53564251-53564301	Caco-2	colon:	n/a
7	chr19:53557328-53557378	HIPEpiC	eye:	n/a
8	chr19:53561386-53561436	ovcar-3	ovarian:	n/a
9	chr19:53538687-53538737	A549	lung:	n/a
10	chr19:53540845-53540895	Jurkat	blood:	n/a
11	chr19:53561811-53561861	HCPEpiC	choroid plexus:	n/a
12	chr19:53561811-53561861	NHDF-neo	bronchial:	n/a
13	chr19:53540902-53540952	HCT-116	colon:	n/a
14	chr19:53540902-53540952	MCF10A-Er-Src	breast:	n/a
15	chr19:53564251-53564301	MCF10A-Er-Src	breast:	n/a
16	chr19:53561811-53561861	HRE	kidney:	n/a
17	chr19:53564251-53564301	HRE	kidney:	n/a
18	chr19:53561441-53561491	HIPEpiC	eye:	n/a
19	chr19:53538883-53538933	T-47D	breast:	n/a
20	chr19:53559508-53559558	SK-N-SH_RA	brain:	n/a
21	chr19:53561973-53562023	Jurkat	blood:	n/a
22	chr19:53541186-53541236	HRPEpiC	eye:	n/a
23	chr19:53538883-53538933	GM06990	blood:	n/a
24	chr19:53561811-53561861	ovcar-3	ovarian:	n/a
25	chr19:53541287-53541337	GM12892	blood:	n/a
26	chr19:53540845-53540895	SK-N-MC	brain:	n/a
27	chr19:53541186-53541236	Jurkat	blood:	n/a
28	chr19:53561441-53561491	BJ	skin:	n/a
29	chr19:53561973-53562023	SK-N-SH	brain:	n/a
30	chr19:53541287-53541337	HRE	kidney:	n/a
31	chr19:53561811-53561861	HL-60	blood:	n/a
32	chr19:53561386-53561436	SK-N-SH	brain:	n/a
33	chr19:53559508-53559558	HCPEpiC	choroid plexus:	n/a
34	chr19:53561563-53561613	A549	lung:	n/a
35	chr19:53540845-53540895	PrEC	prostate:	n/a
36	chr19:53561441-53561491	HNPCEpiC	eye:	n/a
37	chr19:53561563-53561613	HAEpiC	amniotic membrane:	n/a
38	chr19:53561386-53561436	MCF10A-Er-Src	breast:	n/a
39	chr19:53561973-53562023	AG09309	skin:	n/a
40	chr19:53541186-53541236	AG04450	lung:	fetal
41	chr19:53564251-53564301	LNCaP	prostate:	n/a
42	chr19:53540845-53540895	Caco-2	colon:	n/a
43	chr19:53561811-53561861	Caco-2	colon:	n/a
44	chr19:53561386-53561436	AG04449	skin:	fetal
45	chr19:53561386-53561436	HEEpiC	esophagus:	n/a
46	chr19:53541287-53541337	GM12891	blood:	n/a
47	chr19:53561811-53561861	HUVEC	blood vessel:	n/a
48	chr19:53559508-53559558	ProgFib	skin:	n/a
49	chr19:53538883-53538933	LNCaP	prostate:	n/a
50	chr19:53541287-53541337	NH-A	brain:	n/a

(count:10 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr10:9353360..9353955-chr19:53525559..53526530,2	MCF-7	breast:
2	chr19:53514929..53517284-chr19:53527300..53529548,2	MCF-7	breast:
3	chr19:53557284..53559670-chr19:53575484..53577211,2	K562	blood:
4	chr19:53237008..53239147-chr19:53540786..53542527,2	MCF-7	breast:
5	chr19:53536567..53539141-chr19:53540653..53542425,2	K562	blood:
6	chr19:53541069..53542606-chr19:53543581..53546044,2	K562	blood:
7	chr19:53565063..53566659-chr19:53568054..53569781,2	MCF-7	breast:
8	chr19:53565063..53566659-chr19:53568054..53569781,2	MCF-7	breast:
9	chr19:53569123..53571974-chr19:53605112..53607818,2	MCF-7	breast:
10	chr19:53191910..53193662-chr19:53562323..53563875,2	K562	blood:

(count:1 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-ZNF816-2	chr19:53540978-53541136	NONHSAT067613

No data

Variant related genes	Relation type
ERVV-2	TF binding region
ZNF702P	TF binding region
ERVV-2	CpG island
ZNF702P	CpG island
ENSG00000170949	chromatin interactions
ENSG00000242779	chromatin interactions
ENSG00000213020	chromatin interactions
ENSG00000269526	chromatin interactions

Extended variants
information (count: 1751 )
Associated
traits (count: 64 )

Variant overlapped rSNPs/rCNVs (count:1751 , 50 per page) page: 1 2 3 4 5 6 7 ... 36

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs558080071	chr19:53527305-53527306	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
2	rs376049181	chr19:53527313-53527314	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
3	rs543048468	chr19:53527339-53527340	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
4	rs554958617	chr19:53527340-53527341	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
5	rs143927609	chr19:53527367-53527368	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
6	rs541123333	chr19:53527398-53527399	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
7	rs189783571	chr19:53527423-53527424	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
8	rs147400475	chr19:53527426-53527427	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
9	rs546175018	chr19:53527481-53527482	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
10	rs564795511	chr19:53527493-53527494	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
11	rs373354790	chr19:53527546-53527547	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
12	rs531719360	chr19:53527556-53527557	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
13	rs540299014	chr19:53527586-53527587	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
14	rs550173359	chr19:53527633-53527634	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
15	rs577975842	chr19:53527653-53527654	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
16	rs568470703	chr19:53527696-53527697	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
17	rs570626594	chr19:53527709-53527710	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
18	rs529330665	chr19:53527877-53527878	Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
19	rs112783707	chr19:53527904-53527905	Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
20	rs377086851	chr19:53527905-53527906	Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
21	rs73068788	chr19:53527980-53527981	Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
22	rs114679024	chr19:53528017-53528018	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
23	rs142688573	chr19:53528019-53528020	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
24	rs117828954	chr19:53528061-53528062	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
25	rs180943365	chr19:53528066-53528067	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
26	rs573311104	chr19:53528068-53528069	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
27	rs151010755	chr19:53528071-53528072	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
28	rs553077656	chr19:53528077-53528078	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
29	rs34761389	chr19:53528094-53528095	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
30	rs558291825	chr19:53528102-53528103	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
31	rs546410040	chr19:53528103-53528104	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
32	rs562179750	chr19:53528105-53528106	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
33	rs368848052	chr19:53528122-53528123	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
34	rs544139358	chr19:53528134-53528135	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
35	rs185062119	chr19:53528148-53528149	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
36	rs547915302	chr19:53528162-53528163	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
37	rs529337509	chr19:53528228-53528229	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
38	rs547552300	chr19:53528230-53528231	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
39	rs559832235	chr19:53528231-53528232	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
40	rs112319626	chr19:53528242-53528243	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
41	rs533282118	chr19:53528245-53528246	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
42	rs551133234	chr19:53528255-53528256	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
43	rs569516815	chr19:53528273-53528274	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
44	rs536905187	chr19:53528286-53528287	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
45	rs13346174	chr19:53528294-53528295	Weak transcription	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
46	rs567146541	chr19:53528305-53528306	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
47	rs28805988	chr19:53528346-53528347	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
48	rs10413924	chr19:53528414-53528415	Weak transcription	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
49	rs552774394	chr19:53528451-53528452	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
50	rs375759300	chr19:53528484-53528485	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:64)

Disease	PMID	Source
Myelodysplastic syndrome	17634407	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Cancer	21637783	CNVD
Retinoblastoma	21504564	CNVD
Medulloblastoma	21979893	CNVD
Ovarian cancer	21720365	CNVD
Cancer	20164919	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Prostate cancer	18632612	CNVD
Ductal carcinoma	22052326	CNVD
Congenital nephrotic syndrome	18421352	CNVD
Astrocytoma	17934521	CNVD
Leukemia	17361228	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Breast cancer	17603634	CNVD
Glioma	21971842	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Endometrial cancer	22040021	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Oligodendroglial tumors	17285580	CNVD
renal disease	20603712	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Salivary gland adenoid cystic carcinoma	17545515	CNVD
Breast cancer	16608533	CNVD
Neuroblastoma	18923191	CNVD
Chordoma	18071362	CNVD
Urothelial carcinoma	21177765	CNVD
Metanephric adenoma	20802469	CNVD
Acute myeloid leukemia	16864856	CNVD
Bladder cancer	21909424	CNVD
Medulloblastoma	16783165	CNVD
Acute myeloid leukemia	20729466	CNVD
Ovarian cancer	22174824	CNVD
Multiple myeloma	16616336	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Wilms tumour	21544195	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Congenital anomalies of the kidney and urinary tract	18852474	CNVD
Glioblastoma multiforme	17002787	CNVD
Cervical cancer	21062161	CNVD
Primary central nervous system lymphoma	21088137	CNVD
Prostate cancer	16573809	CNVD
small cell lung cancer	20016488	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Myelofibrosis	22110671	CNVD
Gastric adenocarcinoma	19115996	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Lung cancer	18438408	CNVD
Basal cell lymphoma	19029149	CNVD
Diffuse large b-cell lymphoma	19029149	CNVD
Colorectal cancer	16272173	CNVD
Ovarian cancer	21781307	CNVD
Neuroblastoma	20406844	CNVD
Melanoma	17363583	CNVD
Breast cancer	21785460	CNVD
Adrenocortical carcinoma	18281524	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:415 , 50 per page) page: 1 2 3 4 5 6 7 ... 9

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:53527800-53528000	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr19:53528000-53538600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr19:53529400-53530000	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
4	chr19:53529600-53529800	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
5	chr19:53530000-53540400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
6	chr19:53531000-53531200	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
7	chr19:53531000-53531800	Enhancers	iPS-20b Cell Line	embryonic stem cell
8	chr19:53531200-53532000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
9	chr19:53531600-53532200	Enhancers	HUES64 Cell Line	embryonic stem cell
10	chr19:53531600-53532200	Enhancers	iPS-15b Cell Line	embryonic stem cell
11	chr19:53531800-53532000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
12	chr19:53531800-53532200	Flanking Active TSS	iPS-20b Cell Line	embryonic stem cell
13	chr19:53531800-53532400	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
14	chr19:53532000-53532200	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
15	chr19:53532000-53532800	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
16	chr19:53532200-53539600	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
17	chr19:53532800-53533000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
18	chr19:53536200-53536400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
19	chr19:53536400-53536600	ZNF genes & repeats	H9 Derived Neuron Cultured Cells	ES cell derived
20	chr19:53536400-53539600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
21	chr19:53536600-53536800	ZNF genes & repeats	Foreskin Fibroblast Primary Cells skin01	Skin
22	chr19:53536600-53539800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
23	chr19:53536800-53538600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
24	chr19:53537000-53538400	Weak transcription	Fetal Kidney	kidney
25	chr19:53537800-53538800	ZNF genes & repeats	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
26	chr19:53538400-53538800	Enhancers	Placenta Amnion	Placenta Amnion
27	chr19:53538400-53540400	Enhancers	Placenta	Placenta
28	chr19:53538600-53538800	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
29	chr19:53538600-53538800	ZNF genes & repeats	Fetal Kidney	kidney
30	chr19:53538800-53539200	Weak transcription	Placenta Amnion	Placenta Amnion
31	chr19:53538800-53539600	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
32	chr19:53538800-53539600	Weak transcription	Fetal Kidney	kidney
33	chr19:53539200-53539400	Enhancers	Placenta Amnion	Placenta Amnion
34	chr19:53539400-53540600	Weak transcription	Placenta Amnion	Placenta Amnion
35	chr19:53539600-53539800	Flanking Bivalent TSS/Enh	Fetal Kidney	kidney
36	chr19:53539600-53540000	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
37	chr19:53539600-53540000	Bivalent Enhancer	HUES64 Cell Line	embryonic stem cell
38	chr19:53539600-53540200	ZNF genes & repeats	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
39	chr19:53539600-53541400	ZNF genes & repeats	Foreskin Fibroblast Primary Cells skin01	Skin
40	chr19:53539600-53541400	ZNF genes & repeats	Duodenum Mucosa	Duodenum
41	chr19:53539800-53540000	Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
42	chr19:53539800-53540200	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
43	chr19:53539800-53540400	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
44	chr19:53539800-53541200	ZNF genes & repeats	Primary mononuclear cells fromperipheralblood	Blood
45	chr19:53539800-53541400	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
46	chr19:53539800-53541600	Active TSS	Fetal Kidney	kidney
47	chr19:53539800-53542200	ZNF genes & repeats	Primary neutrophils fromperipheralblood	blood
48	chr19:53540000-53540200	Bivalent Enhancer	iPS DF 19.11 Cell Line	embryonic stem cell
49	chr19:53540000-53540600	Flanking Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
50	chr19:53540000-53540600	Flanking Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links