Variant report

Variant nsv1057173
Chromosome Location chr17:50448593-50808216
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:192 , 50 per page) page: 1 2 3 4
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:50448600-50449000 Enhancers ES-I3 Cell Line embryonic stem cell
2 chr17:50448600-50449000 Enhancers iPS-15b Cell Line embryonic stem cell
3 chr17:50448600-50449000 Enhancers Rectal Mucosa Donor 29 rectum
4 chr17:50453600-50454000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr17:50454800-50456000 Enhancers Stomach Mucosa stomach
6 chr17:50455800-50456000 Enhancers Gastric stomach
7 chr17:50455800-50456600 Enhancers Rectal Mucosa Donor 31 rectum
8 chr17:50456000-50456800 Weak transcription Stomach Mucosa stomach
9 chr17:50456000-50457000 Weak transcription Gastric stomach
10 chr17:50456200-50457600 Enhancers HepG2 liver
11 chr17:50456600-50461400 Weak transcription Rectal Mucosa Donor 31 rectum
12 chr17:50456800-50457600 Enhancers Stomach Mucosa stomach
13 chr17:50457000-50457600 Enhancers Gastric stomach
14 chr17:50457000-50457800 Enhancers Pancreas Pancrea
15 chr17:50457600-50466600 Weak transcription Stomach Mucosa stomach
16 chr17:50460800-50461400 Enhancers ES-I3 Cell Line embryonic stem cell
17 chr17:50460800-50461400 Enhancers Brain Hippocampus Middle brain
18 chr17:50461000-50461400 Enhancers Psoas Muscle Psoas
19 chr17:50461400-50462000 Enhancers Rectal Mucosa Donor 31 rectum
20 chr17:50463000-50463400 Enhancers Cortex derived primary cultured neurospheres brain
21 chr17:50466000-50466800 Enhancers Duodenum Mucosa Duodenum
22 chr17:50466200-50466800 Enhancers Rectal Mucosa Donor 31 rectum
23 chr17:50466400-50467200 Enhancers Aorta Aorta
24 chr17:50466600-50467000 Enhancers Stomach Mucosa stomach
25 chr17:50466800-50467000 Flanking Active TSS Duodenum Mucosa Duodenum
26 chr17:50466800-50467000 Enhancers Ovary ovary
27 chr17:50466800-50467000 Flanking Active TSS Rectal Mucosa Donor 31 rectum
28 chr17:50466800-50467200 Active TSS Rectal Mucosa Donor 29 rectum
29 chr17:50467000-50467400 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
30 chr17:50467000-50467400 Active TSS Duodenum Smooth Muscle Duodenum
31 chr17:50467000-50467600 Active TSS Duodenum Mucosa Duodenum
32 chr17:50467000-50467600 Active TSS Ovary ovary
33 chr17:50467000-50467600 Active TSS Rectal Mucosa Donor 31 rectum
34 chr17:50467000-50467800 Active TSS Stomach Mucosa stomach
35 chr17:50467200-50467600 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
36 chr17:50467200-50467600 Active TSS Adipose Nuclei Adipose
37 chr17:50467200-50467600 Active TSS Aorta Aorta
38 chr17:50467200-50467600 Flanking Active TSS Rectal Mucosa Donor 29 rectum
39 chr17:50467200-50467600 Active TSS Rectal Smooth Muscle rectum
40 chr17:50467200-50467600 Active TSS Right Atrium heart
41 chr17:50467200-50467800 Active TSS Colon Smooth Muscle Colon
42 chr17:50467400-50467600 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
43 chr17:50467400-50467600 Flanking Bivalent TSS/Enh Duodenum Smooth Muscle Duodenum
44 chr17:50467600-50468000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
45 chr17:50467600-50468000 Enhancers Rectal Mucosa Donor 29 rectum
46 chr17:50468600-50469400 Enhancers Breast Myoepithelial Primary Cells Breast
47 chr17:50472600-50473400 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
48 chr17:50487400-50488200 Enhancers ES-I3 Cell Line embryonic stem cell
49 chr17:50487800-50488800 Enhancers HepG2 liver
50 chr17:50494600-50494800 Enhancers Cortex derived primary cultured neurospheres brain

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