Variant report
Variant | nsv1057173 |
---|---|
Chromosome Location | chr17:50448593-50808216 |
allele | n/a |
Outlinks | Ensembl   UCSC |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr17:50448600-50449000 | Enhancers | ES-I3 Cell Line | embryonic stem cell |
2 | chr17:50448600-50449000 | Enhancers | iPS-15b Cell Line | embryonic stem cell |
3 | chr17:50448600-50449000 | Enhancers | Rectal Mucosa Donor 29 | rectum |
4 | chr17:50453600-50454000 | Enhancers | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
5 | chr17:50454800-50456000 | Enhancers | Stomach Mucosa | stomach |
6 | chr17:50455800-50456000 | Enhancers | Gastric | stomach |
7 | chr17:50455800-50456600 | Enhancers | Rectal Mucosa Donor 31 | rectum |
8 | chr17:50456000-50456800 | Weak transcription | Stomach Mucosa | stomach |
9 | chr17:50456000-50457000 | Weak transcription | Gastric | stomach |
10 | chr17:50456200-50457600 | Enhancers | HepG2 | liver |
11 | chr17:50456600-50461400 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
12 | chr17:50456800-50457600 | Enhancers | Stomach Mucosa | stomach |
13 | chr17:50457000-50457600 | Enhancers | Gastric | stomach |
14 | chr17:50457000-50457800 | Enhancers | Pancreas | Pancrea |
15 | chr17:50457600-50466600 | Weak transcription | Stomach Mucosa | stomach |
16 | chr17:50460800-50461400 | Enhancers | ES-I3 Cell Line | embryonic stem cell |
17 | chr17:50460800-50461400 | Enhancers | Brain Hippocampus Middle | brain |
18 | chr17:50461000-50461400 | Enhancers | Psoas Muscle | Psoas |
19 | chr17:50461400-50462000 | Enhancers | Rectal Mucosa Donor 31 | rectum |
20 | chr17:50463000-50463400 | Enhancers | Cortex derived primary cultured neurospheres | brain |
21 | chr17:50466000-50466800 | Enhancers | Duodenum Mucosa | Duodenum |
22 | chr17:50466200-50466800 | Enhancers | Rectal Mucosa Donor 31 | rectum |
23 | chr17:50466400-50467200 | Enhancers | Aorta | Aorta |
24 | chr17:50466600-50467000 | Enhancers | Stomach Mucosa | stomach |
25 | chr17:50466800-50467000 | Flanking Active TSS | Duodenum Mucosa | Duodenum |
26 | chr17:50466800-50467000 | Enhancers | Ovary | ovary |
27 | chr17:50466800-50467000 | Flanking Active TSS | Rectal Mucosa Donor 31 | rectum |
28 | chr17:50466800-50467200 | Active TSS | Rectal Mucosa Donor 29 | rectum |
29 | chr17:50467000-50467400 | Active TSS | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
30 | chr17:50467000-50467400 | Active TSS | Duodenum Smooth Muscle | Duodenum |
31 | chr17:50467000-50467600 | Active TSS | Duodenum Mucosa | Duodenum |
32 | chr17:50467000-50467600 | Active TSS | Ovary | ovary |
33 | chr17:50467000-50467600 | Active TSS | Rectal Mucosa Donor 31 | rectum |
34 | chr17:50467000-50467800 | Active TSS | Stomach Mucosa | stomach |
35 | chr17:50467200-50467600 | Active TSS | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
36 | chr17:50467200-50467600 | Active TSS | Adipose Nuclei | Adipose |
37 | chr17:50467200-50467600 | Active TSS | Aorta | Aorta |
38 | chr17:50467200-50467600 | Flanking Active TSS | Rectal Mucosa Donor 29 | rectum |
39 | chr17:50467200-50467600 | Active TSS | Rectal Smooth Muscle | rectum |
40 | chr17:50467200-50467600 | Active TSS | Right Atrium | heart |
41 | chr17:50467200-50467800 | Active TSS | Colon Smooth Muscle | Colon |
42 | chr17:50467400-50467600 | Flanking Active TSS | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
43 | chr17:50467400-50467600 | Flanking Bivalent TSS/Enh | Duodenum Smooth Muscle | Duodenum |
44 | chr17:50467600-50468000 | Enhancers | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
45 | chr17:50467600-50468000 | Enhancers | Rectal Mucosa Donor 29 | rectum |
46 | chr17:50468600-50469400 | Enhancers | Breast Myoepithelial Primary Cells | Breast |
47 | chr17:50472600-50473400 | Enhancers | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
48 | chr17:50487400-50488200 | Enhancers | ES-I3 Cell Line | embryonic stem cell |
49 | chr17:50487800-50488800 | Enhancers | HepG2 | liver |
50 | chr17:50494600-50494800 | Enhancers | Cortex derived primary cultured neurospheres | brain |