Variant report

Variant nsv1058257
Chromosome Location chr16:52093549-52271815
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:344 , 50 per page) page: 1 2 3 4 5 6 7
No. Chromosome Location Chromatin state Cell line Tissue
1 chr16:52096400-52096600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
2 chr16:52096600-52097400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
3 chr16:52097400-52097800 Enhancers Brain Hippocampus Middle brain
4 chr16:52097400-52098200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
5 chr16:52097800-52101200 Weak transcription Brain Hippocampus Middle brain
6 chr16:52098200-52101200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
7 chr16:52099800-52100000 Enhancers Pancreatic Islets Pancreatic Islet
8 chr16:52100400-52101400 Weak transcription Pancreatic Islets Pancreatic Islet
9 chr16:52101000-52101400 Enhancers Cortex derived primary cultured neurospheres brain
10 chr16:52101000-52102000 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
11 chr16:52101200-52101600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
12 chr16:52101200-52101600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
13 chr16:52101200-52101600 Flanking Active TSS Brain Hippocampus Middle brain
14 chr16:52101200-52101600 Enhancers Duodenum Smooth Muscle Duodenum
15 chr16:52101200-52102400 Enhancers Brain Cingulate Gyrus brain
16 chr16:52101200-52102400 Enhancers Brain Substantia Nigra brain
17 chr16:52101200-52102600 Enhancers Brain Anterior Caudate brain
18 chr16:52101200-52102600 Enhancers Brain Inferior Temporal Lobe brain
19 chr16:52101400-52102000 Enhancers Pancreatic Islets Pancreatic Islet
20 chr16:52101400-52102400 Enhancers Brain Angular Gyrus brain
21 chr16:52101400-52110400 Weak transcription Cortex derived primary cultured neurospheres brain
22 chr16:52101600-52101800 Weak transcription Duodenum Smooth Muscle Duodenum
23 chr16:52101600-52104200 Enhancers Brain Hippocampus Middle brain
24 chr16:52101600-52107600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
25 chr16:52101800-52102200 Enhancers Duodenum Smooth Muscle Duodenum
26 chr16:52102000-52102200 Flanking Active TSS Pancreatic Islets Pancreatic Islet
27 chr16:52102000-52103600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
28 chr16:52102200-52102400 Enhancers Pancreatic Islets Pancreatic Islet
29 chr16:52102200-52103000 Enhancers Liver Liver
30 chr16:52102200-52103600 Weak transcription Duodenum Smooth Muscle Duodenum
31 chr16:52102400-52102600 Flanking Active TSS Brain Substantia Nigra brain
32 chr16:52102400-52102800 Flanking Active TSS Brain Angular Gyrus brain
33 chr16:52102400-52102800 Active TSS Pancreatic Islets Pancreatic Islet
34 chr16:52102400-52102800 Enhancers Small Intestine intestine
35 chr16:52102400-52103000 Flanking Active TSS Brain Cingulate Gyrus brain
36 chr16:52102600-52102800 Enhancers HUES64 Cell Line embryonic stem cell
37 chr16:52102600-52102800 Enhancers Brain Substantia Nigra brain
38 chr16:52102600-52103000 Flanking Active TSS Brain Anterior Caudate brain
39 chr16:52102600-52103000 Flanking Active TSS Brain Inferior Temporal Lobe brain
40 chr16:52102600-52103000 Enhancers Brain Dorsolateral Prefrontal Cortex brain
41 chr16:52102600-52103000 Enhancers Duodenum Mucosa Duodenum
42 chr16:52102600-52103000 Enhancers Fetal Lung lung
43 chr16:52102600-52103000 Enhancers Fetal Stomach stomach
44 chr16:52102600-52103000 Enhancers Rectal Mucosa Donor 29 rectum
45 chr16:52102600-52103000 Enhancers Skeletal Muscle Female skeletal muscle
46 chr16:52102600-52104400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
47 chr16:52102600-52104400 Enhancers Brain Germinal Matrix brain
48 chr16:52102800-52103000 Flanking Active TSS Brain Substantia Nigra brain
49 chr16:52102800-52103000 Flanking Active TSS Pancreatic Islets Pancreatic Islet
50 chr16:52102800-52103000 Enhancers Stomach Mucosa stomach

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