No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs113139073 |
chr20:52644522-52644523 |
Weak transcription Enhancers Active TSS
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
2 |
rs563755888 |
chr20:52644579-52644580 |
Weak transcription Enhancers Active TSS
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
3 |
rs369879261 |
chr20:52644582-52644583 |
Weak transcription Enhancers Active TSS
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
4 |
rs531562848 |
chr20:52644625-52644626 |
Weak transcription Enhancers Active TSS Genic enhancers ZNF genes & repeats
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
5 |
rs371935317 |
chr20:52644631-52644632 |
Weak transcription Enhancers Active TSS Genic enhancers ZNF genes & repeats
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
6 |
rs546739615 |
chr20:52644639-52644640 |
Weak transcription Enhancers Active TSS Genic enhancers ZNF genes & repeats
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
7 |
rs568128142 |
chr20:52644649-52644650 |
Weak transcription Enhancers Active TSS Genic enhancers ZNF genes & repeats
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
8 |
rs534099835 |
chr20:52644723-52644724 |
Weak transcription Enhancers Active TSS Genic enhancers ZNF genes & repeats
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
9 |
rs189267021 |
chr20:52644769-52644770 |
Weak transcription Enhancers Active TSS Genic enhancers ZNF genes & repeats
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
10 |
rs570472580 |
chr20:52644808-52644809 |
Weak transcription Enhancers Active TSS Genic enhancers Strong transcription Bivalent Enhancer
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
11 |
rs74641839 |
chr20:52644837-52644838 |
Weak transcription Enhancers Active TSS Genic enhancers Strong transcription Bivalent Enhancer
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
12 |
rs375432259 |
chr20:52644880-52644881 |
Weak transcription Enhancers Active TSS Genic enhancers Strong transcription Bivalent Enhancer
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
13 |
rs555870688 |
chr20:52644881-52644882 |
Weak transcription Enhancers Active TSS Genic enhancers Strong transcription Bivalent Enhancer
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
14 |
rs117879520 |
chr20:52644886-52644887 |
Weak transcription Enhancers Active TSS Genic enhancers Strong transcription Bivalent Enhancer
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
15 |
rs200309771 |
chr20:52644887-52644888 |
Weak transcription Enhancers Active TSS Genic enhancers Strong transcription Bivalent Enhancer
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
16 |
rs367801384 |
chr20:52644899-52644900 |
Weak transcription Enhancers Active TSS Genic enhancers Strong transcription Bivalent Enhancer
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
17 |
rs371739710 |
chr20:52644911-52644912 |
Weak transcription Enhancers Active TSS Genic enhancers Strong transcription Bivalent Enhancer
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
18 |
rs375356126 |
chr20:52644912-52644913 |
Weak transcription Enhancers Active TSS Genic enhancers Strong transcription Bivalent Enhancer
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
19 |
rs369196959 |
chr20:52644917-52644918 |
Weak transcription Enhancers Active TSS Genic enhancers Strong transcription Bivalent Enhancer
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
20 |
rs201873994 |
chr20:52644982-52644983 |
Weak transcription Enhancers Active TSS Genic enhancers Strong transcription Bivalent Enhancer
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
21 |
rs11546139 |
chr20:52644984-52644985 |
Weak transcription Enhancers Active TSS Genic enhancers Strong transcription Bivalent Enhancer
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
22 |
rs200742471 |
chr20:52644990-52644991 |
Weak transcription Enhancers Active TSS Genic enhancers Strong transcription Bivalent Enhancer
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
23 |
rs201563062 |
chr20:52645032-52645033 |
Weak transcription Enhancers Active TSS Genic enhancers Strong transcription Bivalent Enhancer Flanking Active TSS
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
24 |
rs143209009 |
chr20:52645037-52645038 |
Weak transcription Enhancers Active TSS Genic enhancers Strong transcription Bivalent Enhancer Flanking Active TSS
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
25 |
rs367752823 |
chr20:52645087-52645088 |
Weak transcription Enhancers Active TSS Genic enhancers Strong transcription Bivalent Enhancer Flanking Active TSS
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
26 |
rs199762337 |
chr20:52645103-52645104 |
Weak transcription Enhancers Active TSS Genic enhancers Strong transcription Bivalent Enhancer Flanking Active TSS
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
27 |
rs61749688 |
chr20:52645114-52645115 |
Weak transcription Enhancers Active TSS Genic enhancers Strong transcription Bivalent Enhancer Flanking Active TSS
|
Chromatin interactive region
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
28 |
rs535655671 |
chr20:52645123-52645124 |
Weak transcription Enhancers Active TSS Genic enhancers Strong transcription Bivalent Enhancer Flanking Active TSS
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
29 |
rs41296221 |
chr20:52645126-52645127 |
Weak transcription Enhancers Active TSS Genic enhancers Strong transcription Bivalent Enhancer Flanking Active TSS
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
30 |
rs577997366 |
chr20:52645132-52645133 |
Weak transcription Enhancers Active TSS Genic enhancers Strong transcription Bivalent Enhancer Flanking Active TSS
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
31 |
rs77726302 |
chr20:52645142-52645143 |
Weak transcription Enhancers Active TSS Genic enhancers Strong transcription Bivalent Enhancer Flanking Active TSS
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
32 |
rs158551 |
chr20:52645166-52645167 |
Weak transcription Enhancers Active TSS Genic enhancers Strong transcription Bivalent Enhancer Flanking Active TSS
|
Chromatin interactive region
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
33 |
rs61754122 |
chr20:52645167-52645168 |
Weak transcription Enhancers Active TSS Genic enhancers Strong transcription Bivalent Enhancer Flanking Active TSS
|
Chromatin interactive region
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
34 |
rs374609444 |
chr20:52645216-52645217 |
Weak transcription Enhancers Active TSS Strong transcription Genic enhancers
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
35 |
rs549457924 |
chr20:52645219-52645220 |
Weak transcription Enhancers Active TSS Strong transcription Genic enhancers
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
36 |
rs534796037 |
chr20:52645240-52645241 |
Weak transcription Enhancers Active TSS Strong transcription Genic enhancers
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
37 |
rs561920968 |
chr20:52645252-52645253 |
Weak transcription Enhancers Active TSS Strong transcription Genic enhancers
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
38 |
rs201121458 |
chr20:52645265-52645266 |
Weak transcription Enhancers Active TSS Strong transcription Genic enhancers
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
39 |
rs377347859 |
chr20:52645283-52645284 |
Weak transcription Enhancers Active TSS Strong transcription Genic enhancers
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
40 |
rs200609261 |
chr20:52645290-52645291 |
Weak transcription Enhancers Active TSS Strong transcription Genic enhancers
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
41 |
rs199643719 |
chr20:52645309-52645310 |
Weak transcription Enhancers Active TSS Strong transcription Genic enhancers
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
42 |
rs201371925 |
chr20:52645320-52645321 |
Weak transcription Enhancers Active TSS Strong transcription Genic enhancers
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
43 |
rs369178055 |
chr20:52645333-52645334 |
Weak transcription Enhancers Active TSS Strong transcription Genic enhancers
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
44 |
rs570638388 |
chr20:52645335-52645336 |
Weak transcription Enhancers Active TSS Strong transcription Genic enhancers
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
45 |
rs373986689 |
chr20:52645337-52645338 |
Weak transcription Enhancers Active TSS Strong transcription Genic enhancers
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
46 |
rs537738564 |
chr20:52645338-52645339 |
Weak transcription Enhancers Active TSS Strong transcription Genic enhancers
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
47 |
rs150504348 |
chr20:52645341-52645342 |
Weak transcription Enhancers Active TSS Strong transcription Genic enhancers
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
48 |
rs376388302 |
chr20:52645357-52645358 |
Weak transcription Enhancers Active TSS Strong transcription Genic enhancers
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
49 |
rs139488468 |
chr20:52645362-52645363 |
Weak transcription Enhancers Active TSS Strong transcription Genic enhancers
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
50 |
rs150059555 |
chr20:52645363-52645364 |
Weak transcription Enhancers Active TSS Strong transcription Genic enhancers
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|