Variant report

Variant nsv1060072
Chromosome Location chr19:56289331-56450495
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:77 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:56293200-56293400 Enhancers Hela-S3 cervix
2 chr19:56295400-56295600 ZNF genes & repeats iPS-15b Cell Line embryonic stem cell
3 chr19:56300600-56304000 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
4 chr19:56306200-56310800 Weak transcription Pancreas Pancrea
5 chr19:56307400-56313400 Weak transcription Liver Liver
6 chr19:56312000-56313000 Enhancers GM12878-XiMat blood
7 chr19:56312800-56313200 Active TSS Brain Substantia Nigra brain
8 chr19:56312800-56313400 Enhancers Primary B cells from peripheral blood blood
9 chr19:56313000-56313400 Flanking Active TSS GM12878-XiMat blood
10 chr19:56313000-56313400 Enhancers Hela-S3 cervix
11 chr19:56313200-56315600 Weak transcription Brain Substantia Nigra brain
12 chr19:56313400-56314200 Enhancers Liver Liver
13 chr19:56313800-56314000 Enhancers Hela-S3 cervix
14 chr19:56315600-56316000 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
15 chr19:56315600-56316200 ZNF genes & repeats Brain Substantia Nigra brain
16 chr19:56316200-56320800 Weak transcription Brain Substantia Nigra brain
17 chr19:56318800-56319800 Weak transcription Liver Liver
18 chr19:56319800-56320600 Enhancers Liver Liver
19 chr19:56320200-56321000 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
20 chr19:56320400-56320600 Active TSS H9 Derived Neuron Cultured Cells ES cell derived
21 chr19:56320400-56321000 ZNF genes & repeats A549 lung
22 chr19:56320400-56321200 Enhancers GM12878-XiMat blood
23 chr19:56320600-56320800 Active TSS Adipose Nuclei Adipose
24 chr19:56320600-56320800 Flanking Active TSS Hela-S3 cervix
25 chr19:56320600-56321000 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
26 chr19:56320600-56321000 Flanking Active TSS Liver Liver
27 chr19:56320600-56321000 Active TSS Duodenum Mucosa Duodenum
28 chr19:56320600-56321000 Enhancers Pancreas Pancrea
29 chr19:56320600-56321000 Active TSS Rectal Mucosa Donor 29 rectum
30 chr19:56320600-56321000 Enhancers Rectal Mucosa Donor 31 rectum
31 chr19:56320600-56321000 Flanking Active TSS K562 blood
32 chr19:56320600-56321400 Enhancers Primary B cells from peripheral blood blood
33 chr19:56320800-56321000 Flanking Active TSS Adipose Nuclei Adipose
34 chr19:56320800-56321000 ZNF genes & repeats Fetal Intestine Small intestine
35 chr19:56320800-56321000 Bivalent Enhancer Sigmoid Colon Sigmoid Colon
36 chr19:56320800-56321200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
37 chr19:56320800-56321200 Bivalent Enhancer Brain Anterior Caudate brain
38 chr19:56320800-56321200 Active TSS Hela-S3 cervix
39 chr19:56320800-56321400 Active TSS Brain Substantia Nigra brain
40 chr19:56321000-56321400 Enhancers Liver Liver
41 chr19:56321000-56321400 Enhancers K562 blood
42 chr19:56321000-56323000 Weak transcription Rectal Mucosa Donor 29 rectum
43 chr19:56321200-56321400 Flanking Active TSS Hela-S3 cervix
44 chr19:56329400-56330200 Enhancers GM12878-XiMat blood
45 chr19:56329600-56334200 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
46 chr19:56330200-56331800 Flanking Active TSS GM12878-XiMat blood
47 chr19:56330200-56332000 Enhancers Primary B cells from peripheral blood blood
48 chr19:56331200-56331800 Active TSS Rectal Mucosa Donor 29 rectum
49 chr19:56331800-56332600 Enhancers GM12878-XiMat blood
50 chr19:56333400-56334000 Active TSS ES-I3 Cell Line embryonic stem cell

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