Variant report
Variant | nsv1060702 |
---|---|
Chromosome Location | chr22:21815854-21917311 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:1996)
- CpG islands (count:793)
- Chromatin interactive region (count:6)
- LncRNA region (count:4)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No. | Transcrition factor | Chromosome Location | Cell Line | Cell type | Cell Stage | Matched TF binding sites |
---|---|---|---|---|---|---|
1 | ARID3A | chr22:21910418-21910628 | HepG2 | liver: | n/a | n/a |
2 | ARID3A | chr22:21910246-21910718 | K562 | blood: | n/a | n/a |
3 | ATF1 | chr22:21822456-21822596 | K562 | blood: | n/a | n/a |
4 | ATF1 | chr22:21910267-21910662 | K562 | blood: | n/a | n/a |
5 | ATF3 | chr22:21866127-21866289 | K562 | blood: | n/a | n/a |
6 | ATF3 | chr22:21910129-21910721 | K562 | blood: | n/a | n/a |
7 | ATF3 | chr22:21910162-21910876 | K562 | blood: | n/a | n/a |
8 | BACH1 | chr22:21910262-21910699 | K562 | blood: | n/a | n/a |
9 | BATF | chr22:21888942-21889159 | GM12878 | blood: | n/a | n/a |
10 | BATF | chr22:21822965-21823191 | GM12878 | blood: | n/a | n/a |
11 | BATF | chr22:21822372-21822581 | GM12878 | blood: | n/a | n/a |
12 | BATF | chr22:21871643-21871836 | GM12878 | blood: | n/a | n/a |
13 | BCL11A | chr22:21888998-21889271 | GM12878 | blood: | n/a | n/a |
14 | BCL11A | chr22:21868416-21868688 | GM12878 | blood: | n/a | n/a |
15 | BCL11A | chr22:21904654-21904960 | GM12878 | blood: | n/a | n/a |
16 | BCL3 | chr22:21910210-21910678 | A549 | lung: | n/a | n/a |
17 | BHLHE40 | chr22:21904568-21904918 | HepG2 | liver: | n/a | n/a |
18 | BHLHE40 | chr22:21864628-21865020 | HepG2 | liver: | n/a | chr22:21864696-21864712 |
19 | BHLHE40 | chr22:21822115-21822324 | HepG2 | liver: | n/a | n/a |
20 | BHLHE40 | chr22:21889022-21889308 | HepG2 | liver: | n/a | n/a |
21 | BHLHE40 | chr22:21910291-21910722 | K562 | blood: | n/a | n/a |
22 | BHLHE40 | chr22:21872293-21872552 | HepG2 | liver: | n/a | n/a |
23 | BHLHE40 | chr22:21880932-21881265 | HepG2 | liver: | n/a | n/a |
24 | CBX3 | chr22:21894581-21895053 | K562 | blood: | n/a | n/a |
25 | CBX3 | chr22:21903838-21905213 | K562 | blood: | n/a | n/a |
26 | CBX3 | chr22:21894438-21895066 | K562 | blood: | n/a | n/a |
27 | CBX3 | chr22:21885463-21886801 | K562 | blood: | n/a | n/a |
28 | CBX3 | chr22:21867672-21871343 | K562 | blood: | n/a | n/a |
29 | CBX3 | chr22:21850651-21851342 | K562 | blood: | n/a | n/a |
30 | CBX3 | chr22:21864312-21865352 | K562 | blood: | n/a | n/a |
31 | CBX3 | chr22:21898573-21899810 | K562 | blood: | n/a | n/a |
32 | CBX3 | chr22:21871657-21872930 | K562 | blood: | n/a | n/a |
33 | CBX3 | chr22:21910176-21910813 | HCT-116 | colon: | n/a | n/a |
34 | CBX3 | chr22:21910069-21911201 | K562 | blood: | n/a | n/a |
35 | CBX3 | chr22:21888819-21889586 | K562 | blood: | n/a | n/a |
36 | CBX3 | chr22:21821351-21823531 | K562 | blood: | n/a | n/a |
37 | CCNT2 | chr22:21910288-21910581 | K562 | blood: | n/a | n/a |
38 | CEBPB | chr22:21910187-21910689 | MCF-7 | breast: | n/a | n/a |
39 | CEBPB | chr22:21910184-21910983 | K562 | blood: | n/a | n/a |
40 | CEBPB | chr22:21881077-21881692 | K562 | blood: | n/a | n/a |
41 | CEBPB | chr22:21906821-21907131 | K562 | blood: | n/a | n/a |
42 | CEBPB | chr22:21862203-21862460 | K562 | blood: | n/a | n/a |
43 | CEBPB | chr22:21885883-21886127 | K562 | blood: | n/a | n/a |
44 | CEBPB | chr22:21881166-21881539 | K562 | blood: | n/a | n/a |
45 | CEBPB | chr22:21872463-21872997 | K562 | blood: | n/a | n/a |
46 | CEBPB | chr22:21862735-21863114 | K562 | blood: | n/a | n/a |
47 | CEBPB | chr22:21910315-21910989 | K562 | blood: | n/a | n/a |
48 | CEBPB | chr22:21888917-21889544 | K562 | blood: | n/a | n/a |
49 | CEBPB | chr22:21910261-21910925 | IMR90 | lung: | n/a | n/a |
50 | CEBPB | chr22:21835523-21835834 | K562 | blood: | n/a | n/a |
No. | Chromosome Location | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr22:21871914-21871964 | SKMC | muscle: | n/a |
2 | chr22:21871564-21871614 | GM06990 | blood: | n/a |
3 | chr22:21871564-21871614 | HMEC | breast: | n/a |
4 | chr22:21871914-21871964 | NHBE | bronchial: | n/a |
5 | chr22:21906477-21906527 | SK-N-SH_RA | brain: | n/a |
6 | chr22:21823558-21823608 | HAEpiC | amniotic membrane: | n/a |
7 | chr22:21906477-21906527 | NT2-D1 | testis: | n/a |
8 | chr22:21906477-21906527 | NHDF-neo | bronchial: | n/a |
9 | chr22:21822779-21822829 | LNCaP | prostate: | n/a |
10 | chr22:21871920-21871970 | BJ | skin: | n/a |
11 | chr22:21821976-21822026 | AoSMC | blood vessel: | n/a |
12 | chr22:21821976-21822026 | HEEpiC | esophagus: | n/a |
13 | chr22:21871914-21871964 | HRE | kidney: | n/a |
14 | chr22:21821976-21822026 | HEK293 | kidney: | embryo |
15 | chr22:21906477-21906527 | HepG2 | liver: | n/a |
16 | chr22:21825384-21825434 | SK-N-SH | brain: | n/a |
17 | chr22:21825384-21825434 | HepG2 | liver: | n/a |
18 | chr22:21871914-21871964 | HUVEC | blood vessel: | n/a |
19 | chr22:21820215-21820265 | PANC-1 | pancreas: | n/a |
20 | chr22:21823558-21823608 | ovcar-3 | ovarian: | n/a |
21 | chr22:21871564-21871614 | GM12892 | blood: | n/a |
22 | chr22:21867049-21867099 | SK-N-MC | brain: | n/a |
23 | chr22:21823558-21823608 | GM12892 | blood: | n/a |
24 | chr22:21871564-21871614 | AG09319 | gingival: | n/a |
25 | chr22:21822779-21822829 | AoSMC | blood vessel: | n/a |
26 | chr22:21871914-21871964 | MCF-7 | breast: | n/a |
27 | chr22:21823558-21823608 | H1-hESC | embryonic stem cell: | embryo |
28 | chr22:21823558-21823608 | HUVEC | blood vessel: | n/a |
29 | chr22:21822289-21822339 | NHBE | bronchial: | n/a |
30 | chr22:21822289-21822339 | HAEpiC | amniotic membrane: | n/a |
31 | chr22:21906477-21906527 | IMR90 | lung: | fetal |
32 | chr22:21820215-21820265 | ProgFib | skin: | n/a |
33 | chr22:21871914-21871964 | HIPEpiC | eye: | n/a |
34 | chr22:21871920-21871970 | GM06990 | blood: | n/a |
35 | chr22:21825384-21825434 | MCF-7 | breast: | n/a |
36 | chr22:21871914-21871964 | AG09319 | gingival: | n/a |
37 | chr22:21871920-21871970 | T-47D | breast: | n/a |
38 | chr22:21871920-21871970 | H1-hESC | embryonic stem cell: | embryo |
39 | chr22:21820215-21820265 | AG10803 | skin: | n/a |
40 | chr22:21823558-21823608 | PFSK-1 | brain: | n/a |
41 | chr22:21821976-21822026 | PrEC | prostate: | n/a |
42 | chr22:21906477-21906527 | SK-N-MC | brain: | n/a |
43 | chr22:21817930-21817980 | HL-60 | blood: | n/a |
44 | chr22:21825384-21825434 | AG04450 | lung: | fetal |
45 | chr22:21871914-21871964 | U87 | brain: | n/a |
46 | chr22:21822289-21822339 | HCM | heart: | n/a |
47 | chr22:21906477-21906527 | K562 | blood: | n/a |
48 | chr22:21825384-21825434 | AoSMC | blood vessel: | n/a |
49 | chr22:21823579-21823629 | AG10803 | skin: | n/a |
50 | chr22:21867049-21867099 | NHBE | bronchial: | n/a |
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No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr22:21910278..21913507-chr22:21994549..21997856,3 | K562 | blood: | |
2 | chr22:21910242..21911830-chr22:21925513..21928236,2 | K562 | blood: | |
3 | chr22:21821085..21824065-chr22:21983565..21985249,2 | K562 | blood: | |
4 | chr22:21910454..21912029-chr22:22004763..22007007,2 | MCF-7 | breast: | |
5 | chr22:21908736..21910357-chr22:21980107..21982427,2 | K562 | blood: | |
6 | chr22:21821074..21822903-chr22:21982952..21985553,3 | K562 | blood: |
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No. | lncRNA name | Chromosome Location | lncRNA alias |
---|---|---|---|
1 | lnc-HIC2-1 | chr22:21820783-21821265 | ENSG00000206140 |
2 | lnc-RIMBP3C-2 | chr22:21846265-21846383 | NONHSAT083686 |
3 | lnc-RIMBP3C-2 | chr22:21868423-21868512 | NONHSAT083686 |
4 | lnc-RIMBP3C-1 | chr22:21899633-21899933 | NONHSAT083690 |
No data |
No data |
Variant related genes | Relation type |
---|---|
RN7SKP221 | TF binding region |
ENSG00000252799 | TF binding region |
UBE2L3 | TF binding region |
ENSG00000252143 | TF binding region |
TMEM191C | TF binding region |
ENSG00000252605 | TF binding region |
RIMBP3C | TF binding region |
PI4KAP2 | TF binding region |
RN7SKP221 | CpG island |
ENSG00000252799 | CpG island |
UBE2L3 | CpG island |
ENSG00000252143 | CpG island |
TMEM191C | CpG island |
ENSG00000252605 | CpG island |
RIMBP3C | CpG island |
PI4KAP2 | CpG island |
ENSG00000161179 | chromatin interactions |
ENSG00000100023 | chromatin interactions |
ENSG00000128228 | chromatin interactions |
ENSG00000273342 | chromatin interactions |
No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs464161 | chr22:21815928-21815929 | Weak transcription | n/a | n/a | Overlapped CNVs | mRNA abundance |
2 | rs531080552 | chr22:21816027-21816028 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
3 | rs200037568 | chr22:21816129-21816130 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
4 | rs546193774 | chr22:21816595-21816596 | Weak transcription | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
5 | rs562487367 | chr22:21816866-21816867 | Weak transcription | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
6 | rs531233699 | chr22:21816926-21816927 | Weak transcription | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
7 | rs541520877 | chr22:21816959-21816960 | Weak transcription | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
8 | rs561488085 | chr22:21816968-21816969 | Weak transcription | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
9 | rs9606928 | chr22:21817784-21817785 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
10 | rs9609480 | chr22:21817791-21817792 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
11 | rs546273339 | chr22:21817912-21817913 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
12 | rs111897790 | chr22:21818027-21818028 | Weak transcription | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
13 | rs547144929 | chr22:21818407-21818408 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
14 | rs574957795 | chr22:21818468-21818469 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
15 | rs191068539 | chr22:21818478-21818479 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
16 | rs76904254 | chr22:21818481-21818482 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
17 | rs28673540 | chr22:21818754-21818755 | Weak transcription | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
18 | rs367665303 | chr22:21818755-21818756 | Weak transcription | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
19 | rs569217931 | chr22:21818812-21818813 | Weak transcription | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
20 | rs538291566 | chr22:21818887-21818888 | Weak transcription | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
21 | rs111450340 | chr22:21819121-21819122 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
22 | rs555009902 | chr22:21819271-21819272 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
23 | rs568517503 | chr22:21819272-21819273 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
24 | rs534308660 | chr22:21819281-21819282 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
25 | rs554306982 | chr22:21819286-21819287 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
26 | rs577398238 | chr22:21819294-21819295 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
27 | rs546453273 | chr22:21819301-21819302 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
28 | rs368874770 | chr22:21819308-21819309 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
29 | rs556630616 | chr22:21819345-21819346 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
30 | rs575623373 | chr22:21819370-21819371 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
31 | rs541384094 | chr22:21819389-21819390 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
32 | rs561351303 | chr22:21819394-21819395 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
33 | rs571782232 | chr22:21819435-21819436 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
34 | rs71317886 | chr22:21819437-21819438 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
35 | rs530600921 | chr22:21819439-21819440 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
36 | rs564293532 | chr22:21819451-21819452 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
37 | rs533010379 | chr22:21819472-21819473 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
38 | rs375181940 | chr22:21819502-21819503 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
39 | rs74345854 | chr22:21819510-21819511 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
40 | rs9798734 | chr22:21819514-21819515 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
41 | rs201063613 | chr22:21819531-21819532 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
42 | rs61251991 | chr22:21819552-21819553 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
43 | rs1210233 | chr22:21819592-21819593 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
44 | rs563532076 | chr22:21819667-21819668 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
45 | rs529202967 | chr22:21819829-21819830 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
46 | rs147974345 | chr22:21819844-21819845 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
47 | rs548572704 | chr22:21819903-21819904 | Weak transcription | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
48 | rs568478355 | chr22:21819932-21819933 | Weak transcription | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
49 | rs186095638 | chr22:21819992-21819993 | Weak transcription | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
50 | rs534270224 | chr22:21819996-21819997 | Weak transcription | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
Disease | PMID | Source |
---|---|---|
Hodgkin''s lymphoma | 18641027 | CNVD |
Acute lymphoblastic leukemia | 22237106 | CNVD |
Esophageal squamous carcinoma | 21637470 | CNVD |
Glioblastoma multiforme | 21080181 | CNVD |
Velocardiofacial syndrome | 20111667 | CNVD |
Medulloblastoma | 21979893 | CNVD |
sporadic solitary meningiomas | 19589153 | CNVD |
Myofibroblastic sarcoma | 19369631 | CNVD |
Autism | 22495311 | CNVD |
Lung cancer | 18438408 | CNVD |
Emanuel syndrome | 21549014 | CNVD |
Digeorge syndrome | 22283845 | CNVD |
Schizophrenia | 17504246 | CNVD |
Digeorge syndrome | 18033723 | CNVD |
22q11 deletion syndrome | 17034021 | CNVD |
22q11 deletion syndrome | 22511897 | CNVD |
22q11 deletion syndrome | 16829213 | CNVD |
Autism | 22067053 | CNVD |
Autism | 19218893 | CNVD |
Biliary cancer | 22067053 | CNVD |
Congenital heart defect | 21390462 | CNVD |
Digeorge syndrome | 16617304 | CNVD |
Emanuel syndrome | 18184694 | CNVD |
Non-syndromic sensorineural hearing loss | 18184694 | CNVD |
Obsessive-compulsive disorder | 22067053 | CNVD |
Psychosis | 22067053 | CNVD |
Schizophrenia | 19415332 | CNVD |
Schizophrenia | 20587603 | CNVD |
Shprintzen syndrome | 19443537 | CNVD |
absent pulmonary valve syndrome | 16795129 | CNVD |
language delay | 22067053 | CNVD |
periventricular nodular heterotopia | 20648244 | CNVD |
renal disease | 17924346 | CNVD |
Schizophrenia | 20433910 | CNVD |
22q11 deletion syndrome | 17028864 | CNVD |
Schizophrenia | 16969581 | CNVD |
Non-syndromic sensorineural hearing loss | 17135275 | CNVD |
velo-cardio-facial syndrome | 17135275 | CNVD |
Digeorge syndrome | 18787571 | CNVD |
Autism | 18925931 | CNVD |
Non-small cell lung cancer | 21829676 | CNVD |
22q11.2 microdeletion syndrome | 21547621 | CNVD |
Congenital heart defect | 21308838 | CNVD |
Digeorge syndrome | 16512914 | CNVD |
Digeorge syndrome | 20954168 | CNVD |
Nuchal translucency | 21837766 | CNVD |
Right aortic arch in the fetus | 17066500 | CNVD |
Shprintzen syndrome | 17117043 | CNVD |
Tetralogy of fallot | 17405110 | CNVD |
Velocardiofacial syndrome | 20140301 | CNVD |
Velocardiofacial syndrome | 16512914 | CNVD |
bone mass and metabolism | 20516202 | CNVD |
choanal atresia | 18209138 | CNVD |
extracardiac malformations | 17086578 | CNVD |
fetal heart defects | 21308838 | CNVD |
parathyroid gland dysfunction | 16793949 | CNVD |
prenatal diagnosis | 20453657 | CNVD |
velopharyngeal insufficiency | 19620585 | CNVD |
Prader-willi syndrome | 20942916 | CNVD |
22q11 deletion syndrome | 17653112 | CNVD |
Chronic myelomonocytic leukemia | 16760666 | CNVD |
Non-syndromic sensorineural hearing loss | 16829213 | CNVD |
Non-syndromic sensorineural hearing loss | 16760666 | CNVD |
Chordoma | 21602918 | CNVD |
Cancer | 21637783 | CNVD |
Non-syndromic sensorineural hearing loss | 18471307 | CNVD |
Splenic marginal zone lymphoma | 21957467 | CNVD |
Congenital heart defect | 22511896 | CNVD |
Breast cancer | 17603634 | CNVD |
Endometrial cancer | 22040021 | CNVD |
Burkitt''s lymphoma | 18698080 | CNVD |
Acute myeloid leukemia | 16864856 | CNVD |
Astrocytoma | 17387387 | CNVD |
Breast cancer | 21264507 | CNVD |
Glioblastoma multiforme | 17387387 | CNVD |
Seminomas | 18059402 | CNVD |
Cancer | 16751803 | CNVD |
Metanephric adenoma | 20802469 | CNVD |
T-cell prolymphocytic leukemia | 19278963 | CNVD |
Chronic lymphocytic leukemia | 21546498 | CNVD |
Acute lymphoblastic leukemia | 19100363 | CNVD |
Colorectal cancer | 19359472 | CNVD |
Metachromatic leukodystrophy | 18421352 | CNVD |
Basal cell lymphoma | 17170743 | CNVD |
Gastrointestinal stromal cancer | 19259404 | CNVD |
Gastrointestinal stromal cancer | 20470368 | CNVD |
Gastrointestinal stromal cancer | 17535989 | CNVD |
Paraganglioma | 17535989 | CNVD |
Pulmonary chondroma | 17535989 | CNVD |
Acute lymphoblastic leukemia | 21248843 | CNVD |
Breast cancer | 21858162 | CNVD |
small cell lung cancer | 20016488 | CNVD |
Myelodysplastic syndrome | 21251322 | CNVD |
Acute myeloid leukemia | 20729466 | CNVD |
Breast cancer | 21509527 | CNVD |
Hodgkin''s lymphoma | 17606441 | CNVD |
Prostate cancer | 18632612 | CNVD |
Cat eye syndrome | 21549014 | CNVD |
Digeorge syndrome | 21549014 | CNVD |
22q11.2 microdeletion syndrome | 22051516 | CNVD |
22q11.2 microdeletion syndrome | 18483005 | CNVD |
22q11.2 microdeletion syndrome | 19565140 | CNVD |
22q11.2 microdeletion syndrome | 20396437 | CNVD |
22q11.2 microdeletion syndrome | 21390462 | CNVD |
22q11.2 microdeletion syndrome | 21573985 | CNVD |
Austim spectrum disorder | 21302340 | CNVD |
Autism | 20970697 | CNVD |
Bipolar disorder | 19114987 | CNVD |
Congenital heart defect | 21257016 | CNVD |
Developmental delay | 18414209 | CNVD |
DiGeorge-Velo cardiofacial | 19284877 | CNVD |
Epilepsy | 20970697 | CNVD |
Heart disease | 20551144 | CNVD |
Hughes'' syndrome | 16595601 | CNVD |
Mental retardation | 18414209 | CNVD |
Okamoto syndrome | 19046188 | CNVD |
Primary immunodeficiency | 22566803 | CNVD |
Schizophrenia | 20877625 | CNVD |
Schizophrenia | 20553308 | CNVD |
Schizophrenia | 21956041 | CNVD |
Schizophrenia | 20970697 | CNVD |
Tetralogy of Fallot | 22912587 | CNVD |
Velocardiofacial syndrome | 17556857 | CNVD |
Velocardiofacial syndrome | 20206275 | CNVD |
Velocardiofacial syndrome | 20970697 | CNVD |
delayed speech development | 21274400 | CNVD |
velo-cardio-facial syndrome | 16511839 | CNVD |
velo-cardio-facial syndrome | 21763005 | CNVD |
22q11.2 microdeletion syndrome | 18799940 | CNVD |
Digeorge syndrome | 20877625 | CNVD |
22q11.2 microdeletion syndrome | 18923514 | CNVD |
Congenital heart defect | 22185286 | CNVD |
DiGeorge-Velo cardiofacial | 16773131 | CNVD |
Digeorge syndrome | 20186050 | CNVD |
velo-cardio-facial conotruncal-face syndrome | 20186050 | CNVD |
22q11.2 microdeletion syndrome | 22116936 | CNVD |
Disorders of sex development | 22290220 | CNVD |
22q11.2 duplication syndrome | 18923514 | CNVD |
Autism | 22095694 | CNVD |
Mental retardation | 19951919 | CNVD |
Honadal dysgenesis | 21048976 | CNVD |
Mental retardation | 16773131 | CNVD |
22q11.2 microdeletion syndrome | 22395003 | CNVD |
22q11.2 microdeletion syndrome | 18691436 | CNVD |
22q11.2 microdeletion syndrome | 18053182 | CNVD |
22q11.2 microdeletion syndrome | 18324686 | CNVD |
22q11.2 microdeletion syndrome | 20074913 | CNVD |
Congenital heart defect | 20802965 | CNVD |
Congenital heart defect | 21134246 | CNVD |
DiGeorge syndrome | 19040613 | CNVD |
DiGeorge-Velo cardiofacial | 18179902 | CNVD |
Digeorge syndrome | 18172682 | CNVD |
Digeorge syndrome | 22470819 | CNVD |
Digeorge syndrome | 21364285 | CNVD |
Neuroendocrine carcinoma | 22470819 | CNVD |
Non-syndromic sensorineural hearing loss | 20069674 | CNVD |
Smith-Magenis syndrome | 18301319 | CNVD |
Tetralogy of fallot | 19144126 | CNVD |
Velo-cardio-facial syndrome | 21364285 | CNVD |
Velocardiofacial syndrome | 18788013 | CNVD |
cardiac malformation | 20573211 | CNVD |
cardiac malformation | 18172682 | CNVD |
velo-cardio-facial syndrome | 18636631 | CNVD |
Schizophrenia | 21822266 | CNVD |
synaptic plasticity | 21368174 | CNVD |
Schizophrenia | 18043741 | CNVD |
sporadic birth defects | 19047251 | CNVD |
Autism | 19046189 | CNVD |
DiGeorge-Velo cardiofacial | 19047251 | CNVD |
Hypernasal speech | 21968682 | CNVD |
Mental retardation | 17339581 | CNVD |
diverse phenotype | 16760730 | CNVD |
Mental retardation | 20152051 | CNVD |
Breast cancer | 16608533 | CNVD |
Melanoma | 18172304 | CNVD |
Ovarian cancer | 22174824 | CNVD |
T-cell prolymphocytic leukemia | 17713554 | CNVD |
Wilms tumour | 21544195 | CNVD |
Acute myeloid leukemia | 21251322 | CNVD |
Autism | 19521722 | CNVD |
Digeorge syndrome | 19521722 | CNVD |
Autism | 19955444 | CNVD |
Schizophrenia | 19955444 | CNVD |
Mental retardation | 17124404 | CNVD |
Tourette syndrome | 20069037 | CNVD |
Williams-beuren syndrome | 18553513 | CNVD |
Emphysema | 19352772 | CNVD |
Schizophrenia | 17160897 | CNVD |
Cancer | 17160897 | CNVD |
Neuropsychiatric disorder | 20069037 | CNVD |
DiGeorge-Velo cardiofacial | 17597781 | CNVD |
Digeorge syndrome | 17576883 | CNVD |
Schizophrenia | 18806272 | CNVD |
Schizophrenia | 18990708 | CNVD |
Velocardiofacial syndrome | 17576883 | CNVD |
Schizophrenia | 20075378 | CNVD |
Neurodevelopmental disorder | 17015230 | CNVD |
Cancer | 17440070 | CNVD |
Endometrioid adenocarcinoma | 16974079 | CNVD |
22q11.2 deletion syndrome | 22563040 | CNVD |
Disease | 21346257 | CNVD |
Breast cancer | 20668451 | CNVD |
Cancer | 20668451 | CNVD |
Lung cancer | 20668451 | CNVD |
Ovarian cancer | 20668451 | CNVD |
Pancreas cancer | 20668451 | CNVD |
Prostate cancer | 20668451 | CNVD |
Developmental delay | 21147756 | CNVD |
Acute lymphoblastic leukemia | 20435627 | CNVD |
low-grade B-cell lymphoma tumor | 18367492 | CNVD |
Cognitive impairment | 21505072 | CNVD |
Gastrointestinal stromal cancer | 20877625 | CNVD |
Breast cancer | 22522925 | CNVD |
Cutaneous T-cell lymphoma | 21881587 | CNVD |
Myelofibrosis | 22110671 | CNVD |
Asthma | 21956041 | CNVD |
Glioblastoma multiforme | 22286061 | CNVD |
Colorectal cancer | 21128281 | CNVD |
Systemic lupus erythematosus | 21956041 | CNVD |
Primary central nervous system lymphoma | 21088137 | CNVD |
22q11.23 microdeletion syndrome | 19193630 | CNVD |
Pancreatic cancer | 17952125 | CNVD |
Cancer | 20164919 | CNVD |
Glioma | 20126413 | CNVD |
Non-syndromic sensorineural hearing loss | 21293372 | CNVD |
Acute lymphoblastic leukemia | 18458336 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr22:21802400-21822400 | Weak transcription | Lung | lung |
2 | chr22:21803600-21836000 | Weak transcription | Fetal Intestine Large | intestine |
3 | chr22:21804200-21835200 | Weak transcription | Primary hematopoietic stem cells short term culture | blood |
4 | chr22:21805000-21822400 | Weak transcription | Brain Germinal Matrix | brain |
5 | chr22:21806400-21822400 | Weak transcription | Primary mononuclear cells fromperipheralblood | Blood |
6 | chr22:21806400-21836000 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
7 | chr22:21811000-21822400 | Weak transcription | Fetal Intestine Small | intestine |
8 | chr22:21811000-21822400 | Weak transcription | Fetal Stomach | stomach |
9 | chr22:21811200-21822400 | Weak transcription | Right Atrium | heart |
10 | chr22:21811600-21816600 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
11 | chr22:21812000-21828800 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
12 | chr22:21822400-21822600 | Active TSS | IMR90 fetal lung fibroblasts Cell Line | lung |
13 | chr22:21822400-21822600 | Flanking Active TSS | Brain Germinal Matrix | brain |
14 | chr22:21822400-21822600 | Flanking Active TSS | Colonic Mucosa | Colon |
15 | chr22:21822400-21822600 | Active TSS | Fetal Muscle Leg | muscle |
16 | chr22:21822400-21822800 | Active TSS | H9 Cell Line | embryonic stem cell |
17 | chr22:21822400-21822800 | Active TSS | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
18 | chr22:21822400-21822800 | Active TSS | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
19 | chr22:21822400-21822800 | Active TSS | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
20 | chr22:21822400-21822800 | Active TSS | HUES48 Cell Line | embryonic stem cell |
21 | chr22:21822400-21822800 | Active TSS | HUES6 Cell Line | embryonic stem cell |
22 | chr22:21822400-21822800 | Active TSS | HUES64 Cell Line | embryonic stem cell |
23 | chr22:21822400-21822800 | Active TSS | iPS-15b Cell Line | embryonic stem cell |
24 | chr22:21822400-21822800 | Active TSS | iPS-18 Cell Line | embryonic stem cell |
25 | chr22:21822400-21822800 | Active TSS | iPS-20b Cell Line | embryonic stem cell |
26 | chr22:21822400-21822800 | Active TSS | iPS DF 6.9 Cell Line | embryonic stem cell |
27 | chr22:21822400-21822800 | Active TSS | iPS DF 19.11 Cell Line | embryonic stem cell |
28 | chr22:21822400-21822800 | Active TSS | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
29 | chr22:21822400-21822800 | Active TSS | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
30 | chr22:21822400-21822800 | Active TSS | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
31 | chr22:21822400-21822800 | Active TSS | Primary monocytes fromperipheralblood | blood |
32 | chr22:21822400-21822800 | Active TSS | Primary neutrophils fromperipheralblood | blood |
33 | chr22:21822400-21822800 | Active TSS | Primary B cells from peripheral blood | blood |
34 | chr22:21822400-21822800 | Active TSS | Primary T cells fromperipheralblood | blood |
35 | chr22:21822400-21822800 | Active TSS | Primary T helper cells PMA-I stimulated | -- |
36 | chr22:21822400-21822800 | Active TSS | Primary T helper 17 cells PMA-I stimulated | -- |
37 | chr22:21822400-21822800 | Active TSS | Primary T regulatory cells fromperipheralblood | blood |
38 | chr22:21822400-21822800 | Active TSS | Primary Natural Killer cells fromperipheralblood | blood |
39 | chr22:21822400-21822800 | Active TSS | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
40 | chr22:21822400-21822800 | Active TSS | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
41 | chr22:21822400-21822800 | Active TSS | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
42 | chr22:21822400-21822800 | Active TSS | Muscle Satellite Cultured Cells | -- |
43 | chr22:21822400-21822800 | Active TSS | Cortex derived primary cultured neurospheres | brain |
44 | chr22:21822400-21822800 | Active TSS | Ganglion Eminence derived primary cultured neurospheres | brain |
45 | chr22:21822400-21822800 | Active TSS | Foreskin Fibroblast Primary Cells skin01 | Skin |
46 | chr22:21822400-21822800 | Active TSS | Foreskin Fibroblast Primary Cells skin02 | Skin |
47 | chr22:21822400-21822800 | Active TSS | Foreskin Melanocyte Primary Cells skin03 | Skin |
48 | chr22:21822400-21822800 | Active TSS | Adipose Nuclei | Adipose |
49 | chr22:21822400-21822800 | Active TSS | Aorta | Aorta |
50 | chr22:21822400-21822800 | Active TSS | Liver | Liver |