Variant report

Variant nsv1061149
Chromosome Location chr19:53266861-53364138
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:3178 , 50 per page) page: 1 2 3 4 5 6 7 ... 64
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:53262000-53268600 Weak transcription HUES64 Cell Line embryonic stem cell
2 chr19:53262000-53269000 Weak transcription iPS-18 Cell Line embryonic stem cell
3 chr19:53262200-53267400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
4 chr19:53262200-53268800 Weak transcription Dnd41 blood
5 chr19:53263200-53267800 Enhancers Placenta Placenta
6 chr19:53263200-53268800 Weak transcription H9 Cell Line embryonic stem cell
7 chr19:53264600-53285200 ZNF genes & repeats Liver Liver
8 chr19:53265600-53272200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
9 chr19:53265600-53282400 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
10 chr19:53266600-53267000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
11 chr19:53267000-53267400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
12 chr19:53267000-53269200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
13 chr19:53267000-53272600 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
14 chr19:53267200-53271800 Weak transcription Fetal Stomach stomach
15 chr19:53267200-53273600 ZNF genes & repeats Adipose Nuclei Adipose
16 chr19:53267400-53268000 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
17 chr19:53267400-53268400 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
18 chr19:53267800-53268800 Weak transcription Placenta Placenta
19 chr19:53267800-53269400 Weak transcription Placenta Amnion Placenta Amnion
20 chr19:53267800-53272000 ZNF genes & repeats Primary T cells from cord blood blood
21 chr19:53268000-53268800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
22 chr19:53268000-53278000 ZNF genes & repeats Primary hematopoietic stem cells blood
23 chr19:53268000-53278000 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
24 chr19:53268000-53278000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
25 chr19:53268200-53268400 ZNF genes & repeats Fetal Intestine Large intestine
26 chr19:53268200-53269000 ZNF genes & repeats iPS-15b Cell Line embryonic stem cell
27 chr19:53268200-53269200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
28 chr19:53268200-53269400 Weak transcription Fetal Adrenal Gland Adrenal Gland
29 chr19:53268200-53271400 Weak transcription Fetal Thymus thymus
30 chr19:53268200-53272400 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
31 chr19:53268200-53274800 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
32 chr19:53268200-53276000 ZNF genes & repeats Duodenum Mucosa Duodenum
33 chr19:53268400-53268600 Weak transcription Fetal Intestine Large intestine
34 chr19:53268400-53269200 Weak transcription Fetal Muscle Trunk muscle
35 chr19:53268400-53270200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
36 chr19:53268400-53272000 ZNF genes & repeats Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
37 chr19:53268400-53273400 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
38 chr19:53268400-53278600 Weak transcription Brain Cingulate Gyrus brain
39 chr19:53268400-53279200 ZNF genes & repeats IMR90 fetal lung fibroblasts Cell Line lung
40 chr19:53268600-53269200 Weak transcription K562 blood
41 chr19:53268600-53270000 ZNF genes & repeats HUES48 Cell Line embryonic stem cell
42 chr19:53268600-53270400 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
43 chr19:53268600-53270400 ZNF genes & repeats Rectal Smooth Muscle rectum
44 chr19:53268600-53271200 Strong transcription Fetal Intestine Large intestine
45 chr19:53268600-53271400 ZNF genes & repeats Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
46 chr19:53268600-53274800 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
47 chr19:53268600-53275800 ZNF genes & repeats Primary T helper cells PMA-I stimulated --
48 chr19:53268800-53269000 ZNF genes & repeats H1 Cell Line embryonic stem cell
49 chr19:53268800-53269400 ZNF genes & repeats Skeletal Muscle Female skeletal muscle
50 chr19:53268800-53269600 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived

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