Variant report

Variant nsv1061309
Chromosome Location chr19:42187716-42228445
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:252 , 50 per page) page: 1 2 3 4 5 6
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:42185800-42187800 Enhancers Colonic Mucosa Colon
2 chr19:42186400-42188400 Enhancers Rectal Mucosa Donor 31 rectum
3 chr19:42187200-42188000 Weak transcription Rectal Mucosa Donor 29 rectum
4 chr19:42187800-42189600 Weak transcription Colonic Mucosa Colon
5 chr19:42188000-42192600 Active TSS Rectal Mucosa Donor 29 rectum
6 chr19:42189000-42192200 Active TSS Rectal Mucosa Donor 31 rectum
7 chr19:42189600-42192200 Active TSS Colonic Mucosa Colon
8 chr19:42191000-42191600 Active TSS Sigmoid Colon Sigmoid Colon
9 chr19:42191000-42192000 Active TSS Rectal Smooth Muscle rectum
10 chr19:42191400-42192000 Active TSS Esophagus oesophagus
11 chr19:42191400-42193000 Enhancers Pancreas Pancrea
12 chr19:42192000-42192200 Bivalent/Poised TSS Esophagus oesophagus
13 chr19:42192000-42193000 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
14 chr19:42192200-42192400 Flanking Active TSS Rectal Mucosa Donor 31 rectum
15 chr19:42192200-42192400 Bivalent Enhancer Stomach Mucosa stomach
16 chr19:42192200-42192600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
17 chr19:42192200-42192600 Bivalent Enhancer HUES6 Cell Line embryonic stem cell
18 chr19:42192200-42192800 Enhancers Colonic Mucosa Colon
19 chr19:42192400-42200600 Weak transcription Rectal Mucosa Donor 31 rectum
20 chr19:42193000-42195000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
21 chr19:42193000-42195000 Weak transcription Pancreas Pancrea
22 chr19:42194000-42195400 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
23 chr19:42195000-42195200 Bivalent Enhancer HUES6 Cell Line embryonic stem cell
24 chr19:42195000-42195200 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
25 chr19:42195000-42195200 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
26 chr19:42195000-42195400 ZNF genes & repeats H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr19:42195000-42195600 Enhancers Pancreas Pancrea
28 chr19:42195200-42195400 Flanking Bivalent TSS/Enh HUES6 Cell Line embryonic stem cell
29 chr19:42195200-42195400 Flanking Bivalent TSS/Enh iPS-15b Cell Line embryonic stem cell
30 chr19:42195200-42195400 Flanking Active TSS iPS DF 19.11 Cell Line embryonic stem cell
31 chr19:42195200-42195400 Bivalent Enhancer Primary T helper 17 cells PMA-I stimulated --
32 chr19:42195200-42195400 Bivalent Enhancer Primary Natural Killer cells fromperipheralblood blood
33 chr19:42195200-42195600 Bivalent Enhancer Brain Hippocampus Middle brain
34 chr19:42195400-42195600 Bivalent Enhancer iPS-15b Cell Line embryonic stem cell
35 chr19:42195400-42195600 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
36 chr19:42195400-42198200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
37 chr19:42195600-42195800 Flanking Bivalent TSS/Enh iPS-15b Cell Line embryonic stem cell
38 chr19:42195600-42196000 Bivalent Enhancer iPS DF 19.11 Cell Line embryonic stem cell
39 chr19:42195600-42199600 Weak transcription Pancreas Pancrea
40 chr19:42198200-42198600 ZNF genes & repeats H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
41 chr19:42198600-42198800 Bivalent Enhancer Foreskin Melanocyte Primary Cells skin01 Skin
42 chr19:42198800-42199600 Bivalent Enhancer Breast Myoepithelial Primary Cells Breast
43 chr19:42199200-42199400 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
44 chr19:42199400-42203400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
45 chr19:42199600-42200000 Enhancers Pancreas Pancrea
46 chr19:42200000-42200200 Weak transcription Pancreas Pancrea
47 chr19:42200200-42202400 Enhancers Pancreas Pancrea
48 chr19:42200600-42202400 Bivalent Enhancer Rectal Mucosa Donor 29 rectum
49 chr19:42200600-42203000 Enhancers Rectal Mucosa Donor 31 rectum
50 chr19:42200800-42201800 Enhancers Colonic Mucosa Colon

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