Variant report
Variant | nsv1061635 |
---|---|
Chromosome Location | chr16:32208734-32950241 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:4082)
- CpG islands (count:4399)
- Chromatin interactive region (count:2)
- LncRNA region (count:59)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No. | Transcrition factor | Chromosome Location | Cell Line | Cell type | Cell Stage | Matched TF binding sites |
---|---|---|---|---|---|---|
1 | ARID3A | chr16:32655940-32657281 | HepG2 | liver: | n/a | n/a |
2 | ARID3A | chr16:32818363-32818754 | HepG2 | liver: | n/a | n/a |
3 | ARID3A | chr16:32345726-32345816 | HepG2 | liver: | n/a | n/a |
4 | ARID3A | chr16:32817100-32817669 | HepG2 | liver: | n/a | n/a |
5 | ARID3A | chr16:32590243-32590613 | K562 | blood: | n/a | n/a |
6 | ARID3A | chr16:32817496-32817662 | K562 | blood: | n/a | n/a |
7 | ARID3A | chr16:32876710-32876890 | HepG2 | liver: | n/a | n/a |
8 | ARID3A | chr16:32657798-32657972 | HepG2 | liver: | n/a | n/a |
9 | ARID3A | chr16:32295698-32295892 | HepG2 | liver: | n/a | n/a |
10 | ARID3A | chr16:32547652-32548159 | K562 | blood: | n/a | n/a |
11 | ATF1 | chr16:32550785-32551178 | K562 | blood: | n/a | n/a |
12 | ATF1 | chr16:32832855-32832989 | K562 | blood: | n/a | n/a |
13 | ATF1 | chr16:32568174-32568349 | K562 | blood: | n/a | n/a |
14 | ATF1 | chr16:32549843-32550009 | K562 | blood: | n/a | n/a |
15 | ATF1 | chr16:32526924-32527721 | K562 | blood: | n/a | n/a |
16 | ATF1 | chr16:32363593-32363793 | K562 | blood: | n/a | n/a |
17 | ATF1 | chr16:32873309-32873509 | K562 | blood: | n/a | n/a |
18 | ATF1 | chr16:32515726-32516011 | K562 | blood: | n/a | n/a |
19 | ATF1 | chr16:32558594-32558903 | K562 | blood: | n/a | n/a |
20 | ATF1 | chr16:32521319-32521519 | K562 | blood: | n/a | n/a |
21 | ATF1 | chr16:32559923-32560294 | K562 | blood: | n/a | n/a |
22 | ATF1 | chr16:32547497-32547620 | K562 | blood: | n/a | n/a |
23 | ATF1 | chr16:32583782-32583972 | K562 | blood: | n/a | n/a |
24 | ATF3 | chr16:32876765-32876921 | K562 | blood: | n/a | n/a |
25 | ATF3 | chr16:32909214-32909368 | K562 | blood: | n/a | n/a |
26 | BACH1 | chr16:32553830-32554374 | K562 | blood: | n/a | n/a |
27 | BACH1 | chr16:32590237-32590618 | K562 | blood: | n/a | n/a |
28 | BACH1 | chr16:32531668-32531907 | K562 | blood: | n/a | n/a |
29 | BACH1 | chr16:32639174-32639436 | H1-hESC | embryonic stem cell: | n/a | n/a |
30 | BATF | chr16:32805422-32805612 | GM12878 | blood: | n/a | n/a |
31 | BATF | chr16:32727057-32727270 | GM12878 | blood: | n/a | n/a |
32 | BATF | chr16:32451259-32451478 | GM12878 | blood: | n/a | n/a |
33 | BATF | chr16:32333643-32333817 | GM12878 | blood: | n/a | n/a |
34 | BATF | chr16:32799795-32800035 | GM12878 | blood: | n/a | n/a |
35 | BATF | chr16:32361068-32361342 | GM12878 | blood: | n/a | n/a |
36 | BATF | chr16:32366962-32367454 | GM12878 | blood: | n/a | chr16:32367243-32367254 |
37 | BATF | chr16:32801669-32801940 | GM12878 | blood: | n/a | n/a |
38 | BATF | chr16:32368458-32368823 | GM12878 | blood: | n/a | n/a |
39 | BATF | chr16:32846943-32847213 | GM12878 | blood: | n/a | n/a |
40 | BATF | chr16:32335047-32335307 | GM12878 | blood: | n/a | n/a |
41 | BATF | chr16:32909165-32909547 | GM12878 | blood: | n/a | n/a |
42 | BATF | chr16:32815984-32816173 | GM12878 | blood: | n/a | n/a |
43 | BATF | chr16:32652782-32652951 | GM12878 | blood: | n/a | n/a |
44 | BATF | chr16:32944783-32945170 | GM12878 | blood: | n/a | n/a |
45 | BATF | chr16:32652784-32652999 | GM12878 | blood: | n/a | n/a |
46 | BATF | chr16:32373029-32373235 | GM12878 | blood: | n/a | n/a |
47 | BATF | chr16:32848099-32848439 | GM12878 | blood: | n/a | n/a |
48 | BATF | chr16:32368414-32368848 | GM12878 | blood: | n/a | n/a |
49 | BATF | chr16:32805420-32805638 | GM12878 | blood: | n/a | n/a |
50 | BATF | chr16:32435147-32435451 | GM12878 | blood: | n/a | n/a |
No. | Chromosome Location | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr16:32489820-32489870 | AoSMC | blood vessel: | n/a |
2 | chr16:32485636-32485686 | ovcar-3 | ovarian: | n/a |
3 | chr16:32936895-32936945 | HEEpiC | esophagus: | n/a |
4 | chr16:32486117-32486167 | HMEC | breast: | n/a |
5 | chr16:32937040-32937090 | AG04449 | skin: | fetal |
6 | chr16:32936895-32936945 | NHBE | bronchial: | n/a |
7 | chr16:32937057-32937107 | MCF10A-Er-Src | breast: | n/a |
8 | chr16:32489820-32489870 | AoSMC | blood vessel: | n/a |
9 | chr16:32485636-32485686 | ovcar-3 | ovarian: | n/a |
10 | chr16:32936895-32936945 | HEEpiC | esophagus: | n/a |
11 | chr16:32486117-32486167 | HMEC | breast: | n/a |
12 | chr16:32937040-32937090 | AG04449 | skin: | fetal |
13 | chr16:32936895-32936945 | NHBE | bronchial: | n/a |
14 | chr16:32937057-32937107 | MCF10A-Er-Src | breast: | n/a |
15 | chr16:32289757-32289807 | Hepatocyte | liver: | n/a |
16 | chr16:32452725-32452775 | HIPEpiC | eye: | n/a |
17 | chr16:32355981-32356031 | SK-N-SH_RA | brain: | n/a |
18 | chr16:32265041-32265091 | AG04450 | lung: | fetal |
19 | chr16:32214185-32214235 | HPAEpiC | pulmonary alveolar: | n/a |
20 | chr16:32822612-32822662 | SK-N-MC | brain: | n/a |
21 | chr16:32252365-32252415 | HEK293 | kidney: | embryo |
22 | chr16:32288799-32288849 | NH-A | brain: | n/a |
23 | chr16:32486334-32486384 | AG10803 | skin: | n/a |
24 | chr16:32359536-32359586 | MCF10A-Er-Src | breast: | n/a |
25 | chr16:32857551-32857601 | HMEC | breast: | n/a |
26 | chr16:32360428-32360478 | SKMC | muscle: | n/a |
27 | chr16:32858846-32858896 | GM12878 | blood: | n/a |
28 | chr16:32857872-32857922 | HCF | heart: | n/a |
29 | chr16:32934020-32934070 | PFSK-1 | brain: | n/a |
30 | chr16:32599433-32599483 | NB4 | blood: | n/a |
31 | chr16:32289757-32289807 | GM19239 | blood: | n/a |
32 | chr16:32360419-32360469 | HEEpiC | esophagus: | n/a |
33 | chr16:32822612-32822662 | ovcar-3 | ovarian: | n/a |
34 | chr16:32252365-32252415 | SK-N-SH_RA | brain: | n/a |
35 | chr16:32934020-32934070 | AG09319 | gingival: | n/a |
36 | chr16:32659887-32659937 | NT2-D1 | testis: | n/a |
37 | chr16:32940983-32941033 | AG10803 | skin: | n/a |
38 | chr16:32822392-32822442 | HAEpiC | amniotic membrane: | n/a |
39 | chr16:32213913-32213963 | NH-A | brain: | n/a |
40 | chr16:32276952-32277002 | NHBE | bronchial: | n/a |
41 | chr16:32822612-32822662 | AG10803 | skin: | n/a |
42 | chr16:32359756-32359806 | HepG2 | liver: | n/a |
43 | chr16:32857923-32857973 | NB4 | blood: | n/a |
44 | chr16:32940983-32941033 | NHBE | bronchial: | n/a |
45 | chr16:32486117-32486167 | GM12891 | blood: | n/a |
46 | chr16:32360428-32360478 | HCM | heart: | n/a |
47 | chr16:32822392-32822442 | SK-N-SH | brain: | n/a |
48 | chr16:32255825-32255875 | HepG2 | liver: | n/a |
49 | chr16:32290281-32290331 | AG09309 | skin: | n/a |
50 | chr16:32857347-32857397 | CMK | blood: | n/a |
(count:2 , 50 per page) page:
1
No. | lncRNA name | Chromosome Location | lncRNA alias |
---|---|---|---|
1 | lnc-TP53TG3-4 | chr16:32275068-32275108 | ENSG00000260402.1 |
2 | lnc-TP53TG3-7 | chr16:32261941-32262132 | ENSG00000260575.1 |
3 | lnc-AC133485.1.1-8 | chr16:32403379-32403556 | NONHSAT142015 |
4 | lnc-TP53TG3-2 | chr16:32465933-32470079 | ENSG00000261541.1 |
5 | lnc-AC133485.1.1-2 | chr16:32613844-32613953 | NONHSAT142021 |
6 | lnc-TP53TG3-16 | chr16:32450390-32451887 | NONHSAT142016 |
7 | lnc-TP53TG3-3 | chr16:32334099-32334218 | XLOC_011921 |
8 | lnc-RP11-1277H1.1.1-11 | chr16:32926395-32926440 | NONHSAT142052 |
9 | lnc-AC133485.1.1-2 | chr16:32626903-32626960 | NONHSAT142022 |
10 | lnc-RP11-1277H1.1.1-4 | chr16:32897778-32897912 | ENSG00000214614.2 |
11 | lnc-AC133485.1.1-3 | chr16:32677470-32677854 | ENSG00000260311.1 |
12 | lnc-AC133485.1.1-3 | chr16:32661637-32661722 | ENSG00000261569.1 |
13 | lnc-RP11-1277H1.1.1-4 | chr16:32897796-32898008 | ENSG00000214614.2 |
14 | lnc-AC133485.1.1-2 | chr16:32619515-32619545 | NONHSAT142022 |
15 | lnc-TP53TG3-1 | chr16:32747230-32748010 | ENSG00000260845.1 |
16 | lnc-AC133485.1.1-2 | chr16:32626287-32626324 | NONHSAT142022 |
17 | lnc-TP53TG3-7 | chr16:32265674-32265743 | ENSG00000260575.1 |
18 | lnc-RP11-1277H1.1.1-4 | chr16:32896515-32896578 | ENSG00000214614.2 |
19 | lnc-RP11-1277H1.1.1-4 | chr16:32897547-32898093 | ENSG00000214614.2 |
20 | lnc-RP11-1277H1.1.1-4 | chr16:32898658-32898850 | ENSG00000214614.2 |
21 | lnc-AC133485.1.1-2 | chr16:32626742-32626953 | XLOC_011694 |
22 | lnc-AC133485.1.1-3 | chr16:32661637-32661722 | ENSG00000261569.1 |
23 | lnc-AC133485.1.1-8 | chr16:32416298-32416473 | NONHSAT142015 |
24 | lnc-TP53TG3-11 | chr16:32751296-32751487 | NONHSAT142041 |
25 | lnc-AC133485.1.1-4 | chr16:32686358-32686427 | ENSG00000260974.1 |
26 | lnc-AC133485.1.1-8 | chr16:32443002-32443139 | NONHSAT142015 |
27 | lnc-RP11-1277H1.1.1-4 | chr16:32898658-32899949 | ENSG00000214614.2 |
28 | lnc-AC133485.1.1-2 | chr16:32619006-32619076 | NONHSAT142022 |
29 | lnc-AC133485.1.1-8 | chr16:32442004-32442108 | NONHSAT142015 |
30 | lnc-AC133485.1.1-3 | chr16:32660514-32660649 | ENSG00000261569.1 |
31 | lnc-TP53TG3-3 | chr16:32335100-32335382 | XLOC_011921 |
32 | lnc-TP53TG3-1 | chr16:32752331-32752415 | ENSG00000260845.1 |
33 | lnc-AC133485.1.1-2 | chr16:32626742-32626807 | NONHSAT142022 |
34 | lnc-TP53TG3-16 | chr16:32452294-32452480 | NONHSAT142016 |
35 | lnc-RP11-1277H1.1.1-4 | chr16:32898371-32898495 | ENSG00000214614.2 |
36 | lnc-TP53TG3-17 | chr16:32943089-32943890 | NONHSAT142053 |
37 | lnc-AC133485.1.1-3 | chr16:32674902-32675277 | ENSG00000261569.1 |
38 | lnc-AC133485.1.1-8 | chr16:32447309-32447521 | NONHSAT142015 |
39 | lnc-AC133485.1.1-2 | chr16:32613896-32614018 | NONHSAT142022 |
40 | lnc-AC133485.1.1-2 | chr16:32616957-32617035 | NONHSAT142021 |
41 | lnc-AC133485.1.1-4 | chr16:32689961-32690152 | ENSG00000260974.1 |
42 | lnc-AC133485.1.1-8 | chr16:32402131-32402273 | NONHSAT142015 |
43 | lnc-RP11-1277H1.1.1-11 | chr16:32926544-32926857 | NONHSAT142052 |
44 | lnc-AC133485.1.1-2 | chr16:32611620-32611754 | NONHSAT142021 |
45 | lnc-AC133485.1.1-2 | chr16:32619515-32619547 | NONHSAT142021 |
46 | lnc-AC133485.1.1-2 | chr16:32616227-32616285 | NONHSAT142021 |
47 | lnc-RP11-1277H1.1.1-4 | chr16:32899139-32900195 | ENSG00000214614.2 |
48 | lnc-AC133485.1.1-2 | chr16:32616227-32616285 | NONHSAT142022 |
49 | lnc-AC133485.1.1-2 | chr16:32626088-32626324 | XLOC_011694 |
50 | lnc-AC133485.1.1-3 | chr16:32661463-32661540 | ENSG00000261569.1 |
No data |
No data |
Variant related genes | Relation type |
---|---|
ENSG00000260864 | TF binding region |
IGHV2OR16-5 | TF binding region |
ENSG00000261263 | TF binding region |
TP53TG3 | TF binding region |
ENSG00000259966 | TF binding region |
ENSG00000260540 | TF binding region |
ENSG00000261108 | TF binding region |
ENSG00000261541 | TF binding region |
ENSG00000260402 | TF binding region |
ENSG00000260610 | TF binding region |
ENSG00000260158 | TF binding region |
ENSG00000260662 | TF binding region |
ENSG00000260575 | TF binding region |
IGHV3OR16-15 | TF binding region |
ENSG00000259822 | TF binding region |
ENSG00000261719 | TF binding region |
ENSG00000261391 | TF binding region |
ENSG00000260974 | TF binding region |
ENSG00000261111 | TF binding region |
ENSG00000214614 | TF binding region |
ENSG00000260047 | TF binding region |
ENSG00000260344 | TF binding region |
TP53TG3D | TF binding region |
SLC6A10P | TF binding region |
ENSG00000261127 | TF binding region |
HERC2P5 | TF binding region |
ACTR3BP3 | TF binding region |
IGHV3OR16-6 | TF binding region |
ENSG00000261569 | TF binding region |
ENSG00000262187 | TF binding region |
ENSG00000260845 | TF binding region |
ENSG00000260866 | TF binding region |
ENSG00000259934 | TF binding region |
ABCD1P3 | TF binding region |
PABPC1P13 | TF binding region |
ENSG00000260516 | TF binding region |
ENSG00000260311 | TF binding region |
ENSG00000260864 | CpG island |
IGHV2OR16-5 | CpG island |
ENSG00000261263 | CpG island |
TP53TG3 | CpG island |
ENSG00000259966 | CpG island |
ENSG00000260540 | CpG island |
ENSG00000261108 | CpG island |
ENSG00000261541 | CpG island |
ENSG00000260402 | CpG island |
ENSG00000260610 | CpG island |
ENSG00000260158 | CpG island |
ENSG00000260662 | CpG island |
ENSG00000260575 | CpG island |
IGHV3OR16-15 | CpG island |
ENSG00000259822 | CpG island |
ENSG00000261719 | CpG island |
ENSG00000261391 | CpG island |
ENSG00000260974 | CpG island |
ENSG00000261111 | CpG island |
ENSG00000214614 | CpG island |
ENSG00000260047 | CpG island |
ENSG00000260344 | CpG island |
TP53TG3D | CpG island |
SLC6A10P | CpG island |
ENSG00000261127 | CpG island |
HERC2P5 | CpG island |
ACTR3BP3 | CpG island |
IGHV3OR16-6 | CpG island |
ENSG00000261569 | CpG island |
ENSG00000262187 | CpG island |
ENSG00000260845 | CpG island |
ENSG00000260866 | CpG island |
ENSG00000259934 | CpG island |
ABCD1P3 | CpG island |
PABPC1P13 | CpG island |
ENSG00000260516 | CpG island |
ENSG00000260311 | CpG island |
LBR | miRNA target sites |
No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs113701593 | chr16:32211141-32211142 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
2 | rs62043461 | chr16:32211185-32211186 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
3 | rs150012 | chr16:32211206-32211207 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
4 | rs555756959 | chr16:32214007-32214008 | ZNF genes & repeats Enhancers | n/a | n/a | Overlapped CNVs | n/a |
5 | rs370047186 | chr16:32214010-32214011 | ZNF genes & repeats Enhancers | n/a | n/a | Overlapped CNVs | n/a |
6 | rs111332501 | chr16:32214054-32214055 | ZNF genes & repeats Enhancers | n/a | n/a | Overlapped CNVs | n/a |
7 | rs541752701 | chr16:32214103-32214104 | ZNF genes & repeats Enhancers | n/a | n/a | Overlapped CNVs | n/a |
8 | rs560434720 | chr16:32214105-32214106 | ZNF genes & repeats Enhancers | n/a | n/a | Overlapped CNVs | n/a |
9 | rs527477441 | chr16:32214123-32214124 | ZNF genes & repeats Enhancers | n/a | n/a | Overlapped CNVs | n/a |
10 | rs111681640 | chr16:32214126-32214127 | ZNF genes & repeats Enhancers | n/a | n/a | Overlapped CNVs | n/a |
11 | rs191701581 | chr16:32214145-32214146 | ZNF genes & repeats Enhancers | n/a | n/a | Overlapped CNVs | n/a |
12 | rs62043482 | chr16:32226443-32226444 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
13 | rs371590136 | chr16:32226684-32226685 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
14 | rs576488371 | chr16:32227221-32227222 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
15 | rs543865428 | chr16:32227235-32227236 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
16 | rs555499000 | chr16:32227239-32227240 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
17 | rs574638764 | chr16:32227246-32227247 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
18 | rs541764825 | chr16:32227247-32227248 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
19 | rs374055429 | chr16:32228906-32228907 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
20 | rs150018 | chr16:32228980-32228981 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
21 | rs367966186 | chr16:32229008-32229009 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
22 | rs372445114 | chr16:32229058-32229059 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
23 | rs547778784 | chr16:32229084-32229085 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
24 | rs578152692 | chr16:32256606-32256607 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
25 | rs377118010 | chr16:32256693-32256694 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
26 | rs546557840 | chr16:32257439-32257440 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
27 | rs201195970 | chr16:32257482-32257483 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
28 | rs28564277 | chr16:32257485-32257486 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
29 | rs551702823 | chr16:32257506-32257507 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
30 | rs76175912 | chr16:32257509-32257510 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
31 | rs569733702 | chr16:32257535-32257536 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
32 | rs537276587 | chr16:32257562-32257563 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
33 | rs375499320 | chr16:32257574-32257575 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
34 | rs542988672 | chr16:32259306-32259307 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
35 | rs201434040 | chr16:32259307-32259308 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
36 | rs188378176 | chr16:32259314-32259315 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
37 | rs546356654 | chr16:32259322-32259323 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
38 | rs571293362 | chr16:32259327-32259328 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
39 | rs543206646 | chr16:32259888-32259889 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
40 | rs113760463 | chr16:32259919-32259920 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
41 | rs544381891 | chr16:32259944-32259945 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
42 | rs556517305 | chr16:32259947-32259948 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
43 | rs369085295 | chr16:32259965-32259966 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
44 | rs574926378 | chr16:32260053-32260054 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
45 | rs185351677 | chr16:32260068-32260069 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
46 | rs371945031 | chr16:32260084-32260085 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
47 | rs542927384 | chr16:32260155-32260156 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
48 | rs62043557 | chr16:32260209-32260210 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
49 | rs573197769 | chr16:32260235-32260236 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
50 | rs58558661 | chr16:32260708-32260709 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
Disease | PMID | Source |
---|---|---|
Hodgkin''s lymphoma | 20651079 | CNVD |
Metanephric adenoma | 20802469 | CNVD |
Melanoma | 18172304 | CNVD |
Breast cancer | 16608533 | CNVD |
Basal cell lymphoma | 16317097 | CNVD |
Diffuse large b-cell lymphoma | 16317097 | CNVD |
Breast cancer | 17133270 | CNVD |
Endometrioid adenocarcinoma | 16974079 | CNVD |
Adenoid cystic carcinoma | 17372589 | CNVD |
Lung adenocarcinoma | 17086460 | CNVD |
Lung cancer | 17086460 | CNVD |
Autism | 22566537 | CNVD |
Intellectual disability | 22566537 | CNVD |
Non-syndromic sensorineural hearing loss | 18471307 | CNVD |
Acute lymphoblastic leukemia | 20067559 | CNVD |
Endometrial cancer | 22040021 | CNVD |
Ewing''s sarcoma | 21437220 | CNVD |
Astrocytoma | 17387387 | CNVD |
Breast cancer | 17603634 | CNVD |
Breast cancer | 21264507 | CNVD |
Cervical cancer | 21063398 | CNVD |
Esophageal squamous carcinoma | 21637470 | CNVD |
Glioblastoma multiforme | 21080181 | CNVD |
Acute lymphoblastic leukemia | 17690704 | CNVD |
Autism | 19415332 | CNVD |
Medulloblastoma | 21979893 | CNVD |
Non-syndromic sensorineural hearing loss | 22037309 | CNVD |
Schizophrenia | 22958593 | CNVD |
Ductal carcinoma | 22052326 | CNVD |
Breast cancer | 21509527 | CNVD |
Thoracic aortic aneurysm | 21092924 | CNVD |
Autism | 22495311 | CNVD |
Breast cancer | 20668451 | CNVD |
Cancer | 20668451 | CNVD |
Lung cancer | 20668451 | CNVD |
Ovarian cancer | 20668451 | CNVD |
Pancreas cancer | 20668451 | CNVD |
Prostate cancer | 20668451 | CNVD |
Acute lymphoblastic leukemia | 22237106 | CNVD |
Hodgkin''s lymphoma | 17606441 | CNVD |
T-cell prolymphocytic leukemia | 19278963 | CNVD |
Breast cancer | 21858162 | CNVD |
Hepatocellular carcinoma | 16750200 | CNVD |
Mental retardation | 19951919 | CNVD |
Colorectal cancer | 16272173 | CNVD |
Bladder cancer | 21909424 | CNVD |
small cell lung cancer | 20016488 | CNVD |
Breast cancer | 21785460 | CNVD |
T-cell prolymphocytic leukemia | 17713554 | CNVD |
Breast cancer | 21990379 | CNVD |
Astrocytoma | 22246337 | CNVD |
Myelofibrosis | 22110671 | CNVD |
Epilepsy | 22499536 | CNVD |
Attention deficit hyperactivity disorder | 21324949 | CNVD |
Austim spectrum disorder | 21302340 | CNVD |
Autism | 22513405 | CNVD |
Autism | 22958593 | CNVD |
Autism | 18184952 | CNVD |
Autism | 19966786 | CNVD |
Autism | 21394203 | CNVD |
Autism | 21969575 | CNVD |
Autism | 22241247 | CNVD |
Autism | 20970697 | CNVD |
Autism | 20942916 | CNVD |
Epilepsy | 20970697 | CNVD |
Intellectual disability | 22045946 | CNVD |
Mental retardation | 19966786 | CNVD |
Developmental delay | 20808231 | CNVD |
Obesity | 20808231 | CNVD |
Autism | 18923514 | CNVD |
Obesity | 21881559 | CNVD |
Obesity | 21956041 | CNVD |
Autism | 20659124 | CNVD |
Mental retardation | 21062444 | CNVD |
Schizophrenia | 20587603 | CNVD |
Schizophrenia | 21285140 | CNVD |
Schizophrenia | 22885689 | CNVD |
Schizophrenia | 20553308 | CNVD |
Schizophrenia | 20970697 | CNVD |
Schizophrenia | 20433910 | CNVD |
Schizophrenia | 22241247 | CNVD |
Autism | 19242545 | CNVD |
Primary central nervous system lymphoma | 21088137 | CNVD |
Intracranial ependymoma | 16609018 | CNVD |
Schizophrenia | 21399695 | CNVD |
Autism | 21956041 | CNVD |
Disorders of sex development | 21048976 | CNVD |
Autism | 22067053 | CNVD |
Autism | 18156158 | CNVD |
Mental retardation | 20152051 | CNVD |
Autism | 19218893 | CNVD |
Autism | 21289514 | CNVD |
Schizophrenia | 19855392 | CNVD |
neurodevelopmental Syndrome | 20503337 | CNVD |
Benign familial neonatal-infantile seizures | 21060786 | CNVD |
Low-grade fibromyxoid sarcoma | 0 | CNVD |
Cancer | 21183584 | CNVD |
Low-grade fibromyxoid sarcoma | 21536545 | CNVD |
Breast cancer | 21045282 | CNVD |
Neuroblastoma | 20406844 | CNVD |
Autism | 19050728 | CNVD |
Epilepsy | 20923578 | CNVD |
Psychiatric disorder | 19050728 | CNVD |
Schizophrenia | 19348701 | CNVD |
Attention deficit hyperactivity disorder | 19097825 | CNVD |
Autism | 20964600 | CNVD |
Schizophrenia | 19955444 | CNVD |
Schizophrenia | 18990708 | CNVD |
Schizophrenia | 19571808 | CNVD |
Breast cancer | 20409316 | CNVD |
Severe combined immunodeficiency | 19097825 | CNVD |
Esophageal squamous carcinoma | 18350619 | CNVD |
Autism | 18522746 | CNVD |
Sezary syndrome | 18413736 | CNVD |
Wilms tumour | 21544195 | CNVD |
Non-syndromic sensorineural hearing loss | 17122850 | CNVD |
Cancer | 20164920 | CNVD |
Autism | 19287141 | CNVD |
early-passage human iPS cells | 21368824 | CNVD |
Schizophrenia | 20967226 | CNVD |
Non-syndromic sensorineural hearing loss | 21293372 | CNVD |
Lung cancer | 18438408 | CNVD |
Breast cancer | 21364760 | CNVD |
Breast cancer | 17142309 | CNVD |
Cancer | 20164919 | CNVD |
Non-syndromic sensorineural hearing loss | 15273396 | CNVD |
Non-syndromic sensorineural hearing loss | 18451855 | CNVD |
Breast cancer | 22522925 | CNVD |
Non-syndromic sensorineural hearing loss | 22297974 | CNVD |
Recurrent pregnancy loss | 19789632 | CNVD |
Ovarian clear cell carcinoma | 21343371 | CNVD |
Glioma | 20126413 | CNVD |
Osteosarcoma | 21215367 | CNVD |
Autism | 21865298 | CNVD |
Non-syndromic sensorineural hearing loss | 21030649 | CNVD |
Stenocardia | 21860640 | CNVD |
Vasospasm | 21860640 | CNVD |
Melanoma | 20877625 | CNVD |
Pancreatic cancer | 17952125 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr16:32214000-32214200 | ZNF genes & repeats | Foreskin Melanocyte Primary Cells skin01 | Skin |
2 | chr16:32214000-32214200 | Enhancers | Placenta | Placenta |
3 | chr16:32256600-32256800 | Enhancers | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
4 | chr16:32257400-32257600 | Enhancers | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
5 | chr16:32264200-32266000 | Active TSS | Breast Myoepithelial Primary Cells | Breast |
6 | chr16:32264400-32265000 | Active TSS | Rectal Mucosa Donor 29 | rectum |
7 | chr16:32264400-32265800 | Active TSS | Brain Dorsolateral Prefrontal Cortex | brain |
8 | chr16:32264800-32265000 | Active TSS | Primary T cells fromperipheralblood | blood |
9 | chr16:32264800-32265000 | Active TSS | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
10 | chr16:32264800-32265200 | Active TSS | Brain Hippocampus Middle | brain |
11 | chr16:32264800-32265200 | Bivalent/Poised TSS | Fetal Adrenal Gland | Adrenal Gland |
12 | chr16:32264800-32265200 | Active TSS | HSMMtube | muscle |
13 | chr16:32264800-32265200 | Active TSS | Osteobl | bone |
14 | chr16:32264800-32265800 | ZNF genes & repeats | Primary monocytes fromperipheralblood | blood |
15 | chr16:32264800-32265800 | Active TSS | Primary B cells from peripheral blood | blood |
16 | chr16:32264800-32265800 | Active TSS | Primary Natural Killer cells fromperipheralblood | blood |
17 | chr16:32264800-32265800 | Active TSS | Ovary | ovary |
18 | chr16:32264800-32265800 | Active TSS | Right Atrium | heart |
19 | chr16:32264800-32265800 | Active TSS | Dnd41 | blood |
20 | chr16:32264800-32266000 | Active TSS | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
21 | chr16:32264800-32266000 | Active TSS | Adipose Nuclei | Adipose |
22 | chr16:32264800-32266000 | Active TSS | Brain Anterior Caudate | brain |
23 | chr16:32264800-32266000 | Active TSS | Brain Cingulate Gyrus | brain |
24 | chr16:32264800-32266000 | Active TSS | Placenta | Placenta |
25 | chr16:32264800-32266000 | Active TSS | HSMM | muscle |
26 | chr16:32264800-32266000 | Active TSS | K562 | blood |
27 | chr16:32264800-32266200 | Active TSS | A549 | lung |
28 | chr16:32265000-32265200 | Bivalent/Poised TSS | Primary T cells fromperipheralblood | blood |
29 | chr16:32265000-32266000 | Bivalent/Poised TSS | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
30 | chr16:32265200-32265600 | Active TSS | Primary T cells fromperipheralblood | blood |
31 | chr16:32265600-32265800 | Active TSS | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
32 | chr16:32265600-32265800 | Bivalent/Poised TSS | Primary T cells fromperipheralblood | blood |
33 | chr16:32265600-32266000 | Active TSS | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
34 | chr16:32265600-32266000 | Active TSS | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
35 | chr16:32265600-32266000 | Active TSS | Brain Inferior Temporal Lobe | brain |
36 | chr16:32265600-32266000 | Active TSS | Esophagus | oesophagus |
37 | chr16:32265600-32266000 | Active TSS | Left Ventricle | heart |
38 | chr16:32265600-32266000 | Active TSS | Rectal Smooth Muscle | rectum |
39 | chr16:32265600-32266000 | Active TSS | Stomach Smooth Muscle | stomach |
40 | chr16:32265800-32266000 | Flanking Active TSS | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
41 | chr16:32265800-32266000 | Flanking Active TSS | Primary B cells from peripheral blood | blood |
42 | chr16:32265800-32266000 | Flanking Bivalent TSS/Enh | Primary T cells fromperipheralblood | blood |
43 | chr16:32265800-32266000 | Enhancers | Primary Natural Killer cells fromperipheralblood | blood |
44 | chr16:32265800-32266000 | Bivalent/Poised TSS | Brain Dorsolateral Prefrontal Cortex | brain |
45 | chr16:32265800-32266000 | Flanking Active TSS | Dnd41 | blood |
46 | chr16:32266000-32266200 | Enhancers | Dnd41 | blood |
47 | chr16:32282200-32282600 | ZNF genes & repeats | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
48 | chr16:32289800-32290200 | Enhancers | Pancreas | Pancrea |
49 | chr16:32289800-32290200 | Active TSS | Right Atrium | heart |
50 | chr16:32289800-32290200 | Active TSS | Osteobl | bone |