Variant report

Variant nsv1061849
Chromosome Location chr19:53508419-53556812
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:255 , 50 per page) page: 1 2 3 4 5 6
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:53497600-53509800 Weak transcription Right Atrium heart
2 chr19:53498000-53510400 Weak transcription Placenta Amnion Placenta Amnion
3 chr19:53506000-53509800 Weak transcription HUES48 Cell Line embryonic stem cell
4 chr19:53507000-53510400 Enhancers Placenta Placenta
5 chr19:53507600-53509600 Weak transcription K562 blood
6 chr19:53508000-53513200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
7 chr19:53508400-53509600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
8 chr19:53509600-53509800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
9 chr19:53509600-53509800 Enhancers K562 blood
10 chr19:53509800-53510200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
11 chr19:53509800-53510200 Weak transcription K562 blood
12 chr19:53510200-53510400 Enhancers K562 blood
13 chr19:53510200-53511000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
14 chr19:53510400-53510800 Active TSS Rectal Mucosa Donor 29 rectum
15 chr19:53510400-53511000 Enhancers Placenta Amnion Placenta Amnion
16 chr19:53510400-53511200 Enhancers Dnd41 blood
17 chr19:53510400-53511200 Flanking Active TSS K562 blood
18 chr19:53510400-53511400 Flanking Active TSS Placenta Placenta
19 chr19:53510600-53511600 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
20 chr19:53510800-53511200 Weak transcription Right Ventricle heart
21 chr19:53511000-53511200 Flanking Active TSS Placenta Amnion Placenta Amnion
22 chr19:53511000-53511800 Flanking Active TSS H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
23 chr19:53511200-53511400 Enhancers Right Ventricle heart
24 chr19:53511200-53511800 Bivalent Enhancer K562 blood
25 chr19:53511200-53512600 Enhancers Placenta Amnion Placenta Amnion
26 chr19:53511400-53511800 Active TSS Placenta Placenta
27 chr19:53511400-53512000 Weak transcription Right Ventricle heart
28 chr19:53511600-53512200 Enhancers Skeletal Muscle Male skeletal muscle
29 chr19:53511800-53512000 Flanking Active TSS Placenta Placenta
30 chr19:53511800-53512400 Active TSS H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
31 chr19:53512000-53512200 Active TSS Placenta Placenta
32 chr19:53512200-53512400 Enhancers ES-UCSF4 Cell Line embryonic stem cell
33 chr19:53512200-53512400 Flanking Active TSS Placenta Placenta
34 chr19:53512200-53512400 Enhancers Right Ventricle heart
35 chr19:53512400-53512600 Flanking Active TSS H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
36 chr19:53512400-53513000 Enhancers Placenta Placenta
37 chr19:53512400-53513200 Weak transcription iPS-15b Cell Line embryonic stem cell
38 chr19:53512400-53513400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
39 chr19:53512600-53514200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
40 chr19:53512600-53518800 Weak transcription Placenta Amnion Placenta Amnion
41 chr19:53513000-53513800 Genic enhancers Placenta Placenta
42 chr19:53513200-53513400 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
43 chr19:53513200-53513600 Enhancers iPS-15b Cell Line embryonic stem cell
44 chr19:53513400-53514000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
45 chr19:53513400-53514200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
46 chr19:53513600-53513800 Flanking Active TSS iPS-15b Cell Line embryonic stem cell
47 chr19:53513800-53514000 Flanking Active TSS Placenta Placenta
48 chr19:53513800-53514200 Enhancers iPS-15b Cell Line embryonic stem cell
49 chr19:53514000-53514200 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
50 chr19:53514000-53516600 Enhancers Placenta Placenta

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