Variant report
Variant | nsv1061864 |
---|---|
Chromosome Location | chr22:22794082-23255556 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:12299)
- CpG islands (count:3235)
- Chromatin interactive region (count:759)
- LncRNA region (count:51)
- Mature miRNA region (count: 3)
- miRNA target sites (count:8)
No. | Transcrition factor | Chromosome Location | Cell Line | Cell type | Cell Stage | Matched TF binding sites |
---|---|---|---|---|---|---|
1 | ARID3A | chr22:23226039-23226556 | K562 | blood: | n/a | n/a |
2 | ARID3A | chr22:23122421-23122441 | K562 | blood: | n/a | n/a |
3 | ARID3A | chr22:22901601-22901802 | HepG2 | liver: | n/a | n/a |
4 | ARID3A | chr22:23035299-23035558 | K562 | blood: | n/a | n/a |
5 | ARID3A | chr22:22863051-22863422 | HepG2 | liver: | n/a | n/a |
6 | ARID3A | chr22:23088195-23088474 | K562 | blood: | n/a | n/a |
7 | ARID3A | chr22:22829197-22829446 | HepG2 | liver: | n/a | n/a |
8 | ARID3A | chr22:22874015-22874868 | HepG2 | liver: | n/a | n/a |
9 | ARID3A | chr22:23062845-23063144 | HepG2 | liver: | n/a | n/a |
10 | ARID3A | chr22:23071123-23071265 | K562 | blood: | n/a | n/a |
11 | ARID3A | chr22:23030066-23030494 | K562 | blood: | n/a | n/a |
12 | ARID3A | chr22:23185588-23185620 | K562 | blood: | n/a | n/a |
13 | ARID3A | chr22:23096142-23096349 | HepG2 | liver: | n/a | n/a |
14 | ARID3A | chr22:22818443-22818683 | HepG2 | liver: | n/a | n/a |
15 | ARID3A | chr22:22871218-22871395 | K562 | blood: | n/a | n/a |
16 | ARID3A | chr22:23035867-23036079 | HepG2 | liver: | n/a | n/a |
17 | ARID3A | chr22:22815687-22815688 | K562 | blood: | n/a | n/a |
18 | ARID3A | chr22:22899261-22900164 | K562 | blood: | n/a | n/a |
19 | ARID3A | chr22:22894947-22895370 | K562 | blood: | n/a | n/a |
20 | ARID3A | chr22:22815096-22815412 | K562 | blood: | n/a | n/a |
21 | ARID3A | chr22:22958671-22958917 | K562 | blood: | n/a | n/a |
22 | ARID3A | chr22:23123576-23123779 | K562 | blood: | n/a | n/a |
23 | ARID3A | chr22:23008889-23009175 | K562 | blood: | n/a | n/a |
24 | ARID3A | chr22:23095901-23096393 | K562 | blood: | n/a | n/a |
25 | ARID3A | chr22:23062560-23063183 | K562 | blood: | n/a | n/a |
26 | ARID3A | chr22:23112680-23113069 | K562 | blood: | n/a | n/a |
27 | ARID3A | chr22:23119431-23119566 | K562 | blood: | n/a | n/a |
28 | ARID3A | chr22:23052055-23052419 | K562 | blood: | n/a | n/a |
29 | ARID3A | chr22:22929379-22929733 | K562 | blood: | n/a | n/a |
30 | ARID3A | chr22:22873765-22876064 | K562 | blood: | n/a | n/a |
31 | ARID3A | chr22:23232773-23233217 | K562 | blood: | n/a | n/a |
32 | ARID3A | chr22:22921648-22921857 | K562 | blood: | n/a | n/a |
33 | ARID3A | chr22:22818370-22818848 | K562 | blood: | n/a | n/a |
34 | ARID3A | chr22:22862879-22863439 | K562 | blood: | n/a | n/a |
35 | ARID3A | chr22:22936496-22936877 | K562 | blood: | n/a | n/a |
36 | ARID3A | chr22:22901376-22901941 | K562 | blood: | n/a | n/a |
37 | ARID3A | chr22:22861960-22862639 | K562 | blood: | n/a | n/a |
38 | ARID3A | chr22:22918856-22919113 | K562 | blood: | n/a | n/a |
39 | ATF1 | chr22:23050906-23051024 | K562 | blood: | n/a | n/a |
40 | ATF1 | chr22:23105060-23105238 | K562 | blood: | n/a | n/a |
41 | ATF1 | chr22:23125167-23125353 | K562 | blood: | n/a | n/a |
42 | ATF1 | chr22:23125944-23126543 | K562 | blood: | n/a | n/a |
43 | ATF1 | chr22:23158393-23159026 | K562 | blood: | n/a | n/a |
44 | ATF1 | chr22:23023316-23024282 | K562 | blood: | n/a | n/a |
45 | ATF1 | chr22:23208195-23208865 | K562 | blood: | n/a | n/a |
46 | ATF1 | chr22:23047401-23047568 | K562 | blood: | n/a | n/a |
47 | ATF1 | chr22:23055701-23055768 | K562 | blood: | n/a | n/a |
48 | ATF1 | chr22:23169293-23169433 | K562 | blood: | n/a | n/a |
49 | ATF1 | chr22:23013723-23013930 | K562 | blood: | n/a | n/a |
50 | ATF1 | chr22:23144811-23145247 | K562 | blood: | n/a | n/a |
No. | Chromosome Location | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr22:22863293-22863343 | Caco-2 | colon: | n/a |
2 | chr22:22989254-22989304 | AG09309 | skin: | n/a |
3 | chr22:22863293-22863343 | Caco-2 | colon: | n/a |
4 | chr22:22989254-22989304 | AG09309 | skin: | n/a |
5 | chr22:22843648-22843698 | A549 | lung: | n/a |
6 | chr22:23003332-23003382 | K562 | blood: | n/a |
7 | chr22:22918718-22918768 | SKMC | muscle: | n/a |
8 | chr22:22843648-22843698 | HMEC | breast: | n/a |
9 | chr22:23196971-23197021 | CMK | blood: | n/a |
10 | chr22:22986350-22986400 | AG10803 | skin: | n/a |
11 | chr22:22987124-22987174 | HPAEpiC | pulmonary alveolar: | n/a |
12 | chr22:22839645-22839695 | HNPCEpiC | eye: | n/a |
13 | chr22:22862884-22862934 | GM19239 | blood: | n/a |
14 | chr22:22877746-22877796 | Jurkat | blood: | n/a |
15 | chr22:22901830-22901880 | BJ | skin: | n/a |
16 | chr22:22875038-22875088 | HMEC | breast: | n/a |
17 | chr22:22986350-22986400 | SK-N-MC | brain: | n/a |
18 | chr22:22986350-22986400 | NB4 | blood: | n/a |
19 | chr22:22862884-22862934 | NH-A | brain: | n/a |
20 | chr22:22868585-22868635 | GM19239 | blood: | n/a |
21 | chr22:22989254-22989304 | PrEC | prostate: | n/a |
22 | chr22:22901267-22901317 | MCF-7 | breast: | n/a |
23 | chr22:22987072-22987122 | ECC-1 | luminal epithelium: | n/a |
24 | chr22:22901880-22901930 | HL-60 | blood: | n/a |
25 | chr22:22863663-22863713 | HAEpiC | amniotic membrane: | n/a |
26 | chr22:22862802-22862852 | T-47D | breast: | n/a |
27 | chr22:22863655-22863705 | ovcar-3 | ovarian: | n/a |
28 | chr22:23196862-23196912 | HL-60 | blood: | n/a |
29 | chr22:22877746-22877796 | HMEC | breast: | n/a |
30 | chr22:22875038-22875088 | SKMC | muscle: | n/a |
31 | chr22:22863219-22863269 | NB4 | blood: | n/a |
32 | chr22:22874447-22874497 | ProgFib | skin: | n/a |
33 | chr22:22863293-22863343 | LNCaP | prostate: | n/a |
34 | chr22:22901880-22901930 | LNCaP | prostate: | n/a |
35 | chr22:22988798-22988848 | PrEC | prostate: | n/a |
36 | chr22:22874590-22874640 | AG09309 | skin: | n/a |
37 | chr22:22901596-22901646 | RPTEC | kidney: | n/a |
38 | chr22:22862802-22862852 | BE2_C | brain: | n/a |
39 | chr22:22863663-22863713 | HMEC | breast: | n/a |
40 | chr22:22983403-22983453 | BE2_C | brain: | n/a |
41 | chr22:22986667-22986717 | AG10803 | skin: | n/a |
42 | chr22:22987059-22987109 | HRCEpiC | kidney: | n/a |
43 | chr22:22859162-22859212 | LNCaP | prostate: | n/a |
44 | chr22:23196971-23197021 | LNCaP | prostate: | n/a |
45 | chr22:22901857-22901907 | PANC-1 | pancreas: | n/a |
46 | chr22:22988798-22988848 | A549 | lung: | n/a |
47 | chr22:22904270-22904320 | SK-N-MC | brain: | n/a |
48 | chr22:22868585-22868635 | BJ | skin: | n/a |
49 | chr22:22901857-22901907 | PFSK-1 | brain: | n/a |
50 | chr22:22902237-22902287 | A549 | lung: | n/a |
No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr22:23008854..23009551-chr22:23029940..23030690,2 | MCF-7 | breast: | |
2 | chr22:23080532..23082933-chr22:23093316..23095424,2 | K562 | blood: | |
3 | chr22:22901665..22902179-chr22:22909894..22910753,3 | K562 | blood: | |
4 | chr22:23034627..23035920-chr22:23062552..23063228,3 | K562 | blood: | |
5 | chr22:22815066..22815979-chr22:23225208..23226122,2 | K562 | blood: | |
6 | chr22:22929529..22931977-chr22:23035772..23037370,2 | K562 | blood: | |
7 | chr22:22802243..22804145-chr22:22815235..22817257,2 | K562 | blood: | |
8 | chr22:23071304..23074253-chr22:23078346..23081293,2 | K562 | blood: | |
9 | chr22:23237287..23240210-chr22:23254703..23257164,2 | K562 | blood: | |
10 | chr22:23095720..23096793-chr22:23225681..23226777,7 | K562 | blood: | |
11 | chr22:22818512..22819047-chr22:22929119..22929840,3 | K562 | blood: | |
12 | chr22:23190706..23191213-chr22:23623766..23624457,2 | K562 | blood: | |
13 | chr22:23095784..23096610-chr22:23233130..23233640,2 | K562 | blood: | |
14 | chr22:23130308..23131793-chr22:23219322..23220417,8 | K562 | blood: | |
15 | chr22:23221267..23223203-chr22:23236416..23239424,3 | K562 | blood: | |
16 | chr22:22818502..22819097-chr22:23225816..23226413,3 | K562 | blood: | |
17 | chr22:23152221..23152901-chr22:23190288..23191157,3 | K562 | blood: | |
18 | chr22:23130817..23133388-chr22:23167138..23169692,2 | K562 | blood: | |
19 | chr22:22818125..22818946-chr22:22894855..22895468,2 | MCF-7 | breast: | |
20 | chr22:22510850..22511523-chr22:23029816..23030698,2 | K562 | blood: | |
21 | chr22:23025457..23028332-chr22:23029232..23031511,3 | K562 | blood: | |
22 | chr22:22932799..22934322-chr22:22954672..22956825,2 | K562 | blood: | |
23 | chr22:22711103..22713710-chr22:22892140..22893898,2 | K562 | blood: | |
24 | chr22:23197561..23198498-chr22:23225909..23226760,4 | MCF-7 | breast: | |
25 | chr22:22823437..22825876-chr22:22832174..22833684,2 | K562 | blood: | |
26 | chr22:23112324..23114387-chr22:23139146..23140685,2 | K562 | blood: | |
27 | chr22:22872350..22874493-chr5:57759289..57762269,2 | K562 | blood: | |
28 | chr22:23152570..23153090-chr22:23180111..23180906,2 | K562 | blood: | |
29 | chr22:22818443..22819012-chr22:22929528..22930033,2 | MCF-7 | breast: | |
30 | chr22:23112382..23113353-chr22:23225822..23226588,5 | K562 | blood: | |
31 | chr12:7519897..7522502-chr22:22898699..22901020,2 | K562 | blood: | |
32 | chr22:23129985..23132046-chr22:23176209..23178175,2 | K562 | blood: | |
33 | chr22:22869194..22871714-chr22:23521389..23524203,2 | K562 | blood: | |
34 | chr22:22901204..22902181-chr22:22936191..22937061,2 | K562 | blood: | |
35 | chr22:22815195..22816024-chr22:22918500..22919019,2 | K562 | blood: | |
36 | chr22:22711086..22713329-chr22:22894770..22898200,3 | K562 | blood: | |
37 | chr22:23144551..23145511-chr22:23470374..23471293,4 | K562 | blood: | |
38 | chr22:23054239..23055029-chr22:23225832..23226341,2 | K562 | blood: | |
39 | chr22:23061644..23064154-chr22:23089157..23090984,2 | K562 | blood: | |
40 | chr22:23095758..23096682-chr22:23190267..23191347,4 | K562 | blood: | |
41 | chr22:23054391..23056750-chr22:23065881..23068203,2 | K562 | blood: | |
42 | chr22:22811413..22813356-chr22:22840248..22842971,2 | K562 | blood: | |
43 | chr22:22823832..22826164-chr22:22828089..22830611,2 | K562 | blood: | |
44 | chr22:22817463..22819380-chr22:22957921..22959383,14 | K562 | blood: | |
45 | chr22:23117086..23119817-chr22:23129556..23132183,2 | K562 | blood: | |
46 | chr22:23029744..23030755-chr22:23090478..23091090,6 | K562 | blood: | |
47 | chr22:22955844..22957349-chr22:22958037..22960847,2 | K562 | blood: | |
48 | chr22:22817987..22818671-chr22:23088295..23088910,2 | K562 | blood: | |
49 | chr22:23112678..23113353-chr22:23153551..23154062,2 | K562 | blood: | |
50 | chr22:23024129..23024811-chr22:23034990..23035498,2 | K562 | blood: |
No. | lncRNA name | Chromosome Location | lncRNA alias |
---|---|---|---|
1 | lnc-POM121L1P-1 | chr22:23035462-23035547 | NONHSAT083808 |
2 | lnc-GGTLC2-10 | chr22:23104787-23105009 | NONHSAT083819 |
3 | lnc-POM121L1P-5 | chr22:23186421-23186739 | refGeneNc_260_NR_028483 |
4 | lnc-GGTLC2-5 | chr22:22961042-22961081 | NONHSAT083792 |
5 | lnc-GGTLC2-3 | chr22:23007120-23007377 | NONHSAT083803 |
6 | lnc-POM121L1P-5 | chr22:23220658-23220783 | refGeneNc_260_NR_028483 |
7 | lnc-LL22NC03-63E9.3.1-2 | chr22:22922478-22922760 | NONHSAT083790 |
8 | lnc-POM121L1P-5 | chr22:23200951-23201121 | refGeneNc_260_NR_028483 |
9 | lnc-POM121L1P-1 | chr22:23038799-23038911 | NONHSAT083808 |
10 | lnc-POM121L1P-1 | chr22:23035263-23035547 | ENSG00000223999 |
11 | lnc-LL22NC03-63E9.3.1-4 | chr22:22828865-22829110 | expReg_chr22_1075_+ |
12 | lnc-RTDR1-6 | chr22:23221233-23221684 | NONHSAT083832 |
13 | lnc-POM121L1P-3 | chr22:23053951-23054068 | NONHSAT083813 |
14 | lnc-RTDR1-4 | chr22:23242926-23243073 | NONHSAT083834 |
15 | lnc-POM121L1P-1 | chr22:23035358-23035378 | NONHSAT083808 |
16 | lnc-POM121L1P-4 | chr22:23155178-23156344 | ucscGeneNc_uc002zzz_1 |
17 | lnc-IGLL5-5 | chr22:23180779-23181049 | NONHSAT083827 |
18 | lnc-RTDR1-6 | chr22:23220011-23220059 | NONHSAT083832 |
19 | lnc-POM121L1P-5 | chr22:23164245-23164726 | refGeneNc_260_NR_028483 |
20 | lnc-POM121L1P-5 | chr22:23178179-23178296 | refGeneNc_260_NR_028483 |
21 | lnc-D87017.1-3 | chr22:23252998-23253245 | NONHSAT083835 |
22 | lnc-IGLL5-4 | chr22:23192550-23192799 | NONHSAT083828 |
23 | lnc-POM121L1P-5 | chr22:23167960-23168108 | refGeneNc_260_NR_028483 |
24 | lnc-POM121L1P-5 | chr22:23165262-23165535 | refGeneNc_260_NR_028483 |
25 | lnc-LL22NC03-63E9.3.1-6 | chr22:22804685-22804990 | NONHSAT083786 |
26 | lnc-LL22NC03-63E9.3.1-1 | chr22:22906072-22909007 | NR_027426 |
27 | lnc-GGTLC2-4 | chr22:23015622-23015679 | NONHSAT083804 |
28 | lnc-RTDR1-1 | chr22:23248506-23248831 | NONHSAT083775 |
29 | lnc-POM121L1P-1 | chr22:23045057-23045160 | NONHSAT083808 |
30 | lnc-GGTLC2-4 | chr22:23015829-23016072 | NONHSAT083804 |
31 | lnc-GGTLC2-5 | chr22:22961376-22961633 | NONHSAT083792 |
32 | lnc-LL22NC03-63E9.3.1-5 | chr22:22819996-22820323 | NONHSAT083787 |
33 | lnc-POM121L1P-1 | chr22:23045437-23045463 | NONHSAT083808 |
34 | lnc-POM121L1P-1 | chr22:23035632-23035797 | ENSG00000223999 |
35 | lnc-GGTLC2-6 | chr22:23021570-23021818 | NONHSAT083805 |
36 | lnc-POM121L1P-5 | chr22:23197736-23197863 | refGeneNc_260_NR_028483 |
37 | lnc-GGTLC2-3 | chr22:23006943-23006988 | NONHSAT083803 |
38 | lnc-POM121L1P-1 | chr22:23045057-23045160 | NONHSAT083810 |
39 | lnc-GGTLC2-9 | chr22:23098043-23098286 | NONHSAT083817 |
40 | lnc-LL22NC03-63E9.3.1-6 | chr22:22804540-22804573 | NONHSAT083786 |
41 | lnc-RTDR1-4 | chr22:23243305-23243327 | NONHSAT083834 |
42 | lnc-GGTLC2-8 | chr22:23081432-23081675 | NONHSAT083816 |
43 | lnc-LL22NC03-63E9.3.1-1 | chr22:22901756-22901814 | NR_027426 |
44 | lnc-POM121L1P-3 | chr22:23048732-23048890 | NONHSAT083813 |
45 | lnc-IGLL5-7 | chr22:23157168-23157423 | NONHSAT083824 |
46 | lnc-GGTLC2-7 | chr22:23043245-23043455 | NONHSAT083812 |
47 | lnc-RTDR1-4 | chr22:23243491-23243570 | NONHSAT083834 |
48 | lnc-POM121L1P-1 | chr22:23038579-23038911 | NONHSAT083810 |
49 | lnc-LL22NC03-63E9.3.1-1 | chr22:22905268-22905377 | NR_027426 |
50 | lnc-POM121L1P-1 | chr22:23045437-23045463 | NONHSAT083810 |
miRNA name | Chromosome Location | mirBase accession |
---|---|---|
hsa-miR-5571-5p | chr22:23228471-23228491 | MIMAT0022257 |
hsa-miR-650 | chr22:23165285-23165305 | MIMAT0003320 |
hsa-miR-5571-3p | chr22:23228511-23228529 | MIMAT0022258 |
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No. | miRNA target gene | miRNA name | Chromosome Location | mirBase accession |
---|---|---|---|---|
1 | ZNF280B | hsa-let-7d-5p | chr22:22838970-22838991 | |
2 | ZNF280B | hsa-let-7d-5p | chr22:22839482-22839476 | |
3 | ZNF280B | hsa-let-7f-5p | chr22:22839295-22839316 | |
4 | ZNF280B | hsa-let-7f-5p | chr22:22839482-22839476 | |
5 | ZNF280B | hsa-let-7d-5p | chr22:22839295-22839316 | |
6 | ZNF280B | hsa-let-7f-5p | chr22:22839301-22839294 | |
7 | ZNF280B | hsa-let-7d-5p | chr22:22839301-22839294 | |
8 | ZNF280B | hsa-let-7f-5p | chr22:22838970-22838990 |
Variant related genes | Relation type |
---|---|
ENSG00000264824 | TF binding region |
IGLV3-7 | TF binding region |
ENSG00000207833 | TF binding region |
MIR650 | TF binding region |
ENSG00000226477 | TF binding region |
ENSG00000207832 | TF binding region |
IGLV4-3 | TF binding region |
IGLJ5 | TF binding region |
ZNF280B | TF binding region |
IGLV3-2 | TF binding region |
IGLV2-34 | TF binding region |
ENSG00000220891 | TF binding region |
IGLV3-32 | TF binding region |
IGLV3-13 | TF binding region |
IGLV3-4 | TF binding region |
ENSG00000237127 | TF binding region |
ENSG00000232350 | TF binding region |
IGLC1 | TF binding region |
IGLV3-6 | TF binding region |
IGLV2-5 | TF binding region |
IGLV3-16 | TF binding region |
IGLV2-18 | TF binding region |
IGLV3-17 | TF binding region |
ENSG00000264629 | TF binding region |
IGLJ6 | TF binding region |
IGLV3-31 | TF binding region |
IGLVVI-22-1 | TF binding region |
BCRP4 | TF binding region |
IGLJ4 | TF binding region |
ENSG00000207830 | TF binding region |
IGLC4 | TF binding region |
IGLV3-12 | TF binding region |
IGLV3-25 | TF binding region |
ENSG00000207835 | TF binding region |
ENSG00000231392 | TF binding region |
IGLV2-23 | TF binding region |
IGLV3-30 | TF binding region |
POM121L1P | TF binding region |
IGLJ2 | TF binding region |
ENSG00000207834 | TF binding region |
ENSG00000226595 | TF binding region |
IGLV2-8 | TF binding region |
IGLC5 | TF binding region |
IGLV2-28 | TF binding region |
IGLV7-35 | TF binding region |
IGLV3-10 | TF binding region |
IGLV2-11 | TF binding region |
ENSG00000239066 | TF binding region |
IGLVVI-25-1 | TF binding region |
IGLV3-15 | TF binding region |
IGLV3-26 | TF binding region |
IGLL5 | TF binding region |
IGLJ3 | TF binding region |
IGLV3-19 | TF binding region |
IGLV3-24 | TF binding region |
ENSG00000223999 | TF binding region |
IGLV3-22 | TF binding region |
IGLV3-27 | TF binding region |
GGTLC2 | TF binding region |
IGLC3 | TF binding region |
IGLV3-9 | TF binding region |
IGLV2-14 | TF binding region |
PRAME | TF binding region |
IGLVI-20 | TF binding region |
ZNF280A | TF binding region |
IGLV3-1 | TF binding region |
ENSG00000230821 | TF binding region |
IGLJ1 | TF binding region |
IGLV3-21 | TF binding region |
IGLV3-29 | TF binding region |
IGLV2-33 | TF binding region |
IGLC2 | TF binding region |
ENSG00000264824 | CpG island |
IGLV3-7 | CpG island |
ENSG00000207833 | CpG island |
MIR650 | CpG island |
ENSG00000226477 | CpG island |
ENSG00000207832 | CpG island |
IGLV4-3 | CpG island |
IGLJ5 | CpG island |
ZNF280B | CpG island |
IGLV3-2 | CpG island |
IGLV2-34 | CpG island |
ENSG00000220891 | CpG island |
IGLV3-32 | CpG island |
IGLV3-13 | CpG island |
IGLV3-4 | CpG island |
ENSG00000237127 | CpG island |
ENSG00000232350 | CpG island |
IGLC1 | CpG island |
IGLV3-6 | CpG island |
IGLV2-5 | CpG island |
IGLV3-16 | CpG island |
IGLV2-18 | CpG island |
IGLV3-17 | CpG island |
ENSG00000264629 | CpG island |
IGLJ6 | CpG island |
IGLV3-31 | CpG island |
IGLVVI-22-1 | CpG island |
BCRP4 | CpG island |
IGLJ4 | CpG island |
ENSG00000207830 | CpG island |
IGLC4 | CpG island |
IGLV3-12 | CpG island |
IGLV3-25 | CpG island |
ENSG00000207835 | CpG island |
ENSG00000231392 | CpG island |
IGLV2-23 | CpG island |
IGLV3-30 | CpG island |
POM121L1P | CpG island |
IGLJ2 | CpG island |
ENSG00000207834 | CpG island |
ENSG00000226595 | CpG island |
IGLV2-8 | CpG island |
IGLC5 | CpG island |
IGLV2-28 | CpG island |
IGLV7-35 | CpG island |
IGLV3-10 | CpG island |
IGLV2-11 | CpG island |
ENSG00000239066 | CpG island |
IGLVVI-25-1 | CpG island |
IGLV3-15 | CpG island |
IGLV3-26 | CpG island |
IGLL5 | CpG island |
IGLJ3 | CpG island |
IGLV3-19 | CpG island |
IGLV3-24 | CpG island |
ENSG00000223999 | CpG island |
IGLV3-22 | CpG island |
IGLV3-27 | CpG island |
GGTLC2 | CpG island |
IGLC3 | CpG island |
IGLV3-9 | CpG island |
IGLV2-14 | CpG island |
PRAME | CpG island |
IGLVI-20 | CpG island |
ZNF280A | CpG island |
IGLV3-1 | CpG island |
ENSG00000230821 | CpG island |
IGLJ1 | CpG island |
IGLV3-21 | CpG island |
IGLV3-29 | CpG island |
IGLV2-33 | CpG island |
IGLC2 | CpG island |
ENSG00000211656 | chromatin interactions |
ENSG00000236794 | chromatin interactions |
ENSG00000215456 | chromatin interactions |
ENSG00000211653 | chromatin interactions |
ENSG00000234741 | chromatin interactions |
ENSG00000231392 | chromatin interactions |
ENSG00000223350 | chromatin interactions |
ENSG00000253329 | chromatin interactions |
ENSG00000198477 | chromatin interactions |
ENSG00000211649 | chromatin interactions |
ENSG00000206652 | chromatin interactions |
ENSG00000196787 | chromatin interactions |
ENSG00000211681 | chromatin interactions |
ENSG00000232603 | chromatin interactions |
ENSG00000253546 | chromatin interactions |
ENSG00000253631 | chromatin interactions |
ENSG00000220891 | chromatin interactions |
ENSG00000211675 | chromatin interactions |
ENSG00000169548 | chromatin interactions |
ENSG00000100030 | chromatin interactions |
ENSG00000211655 | chromatin interactions |
ENSG00000211657 | chromatin interactions |
ENSG00000211685 | chromatin interactions |
ENSG00000100027 | chromatin interactions |
ENSG00000223999 | chromatin interactions |
ENSG00000253338 | chromatin interactions |
ENSG00000253234 | chromatin interactions |
ENSG00000211669 | chromatin interactions |
ENSG00000253448 | chromatin interactions |
ENSG00000264824 | chromatin interactions |
ENSG00000230821 | chromatin interactions |
ENSG00000168288 | chromatin interactions |
ENSG00000254077 | chromatin interactions |
ENSG00000211670 | chromatin interactions |
ENSG00000254030 | chromatin interactions |
ENSG00000211678 | chromatin interactions |
ENSG00000211676 | chromatin interactions |
ENSG00000253920 | chromatin interactions |
ENSG00000207834 | chromatin interactions |
ENSG00000211680 | chromatin interactions |
ENSG00000207832 | chromatin interactions |
ENSG00000215417 | chromatin interactions |
ENSG00000253913 | chromatin interactions |
ENSG00000211679 | chromatin interactions |
ENSG00000253451 | chromatin interactions |
ENSG00000128228 | chromatin interactions |
ENSG00000253963 | chromatin interactions |
ENSG00000273342 | chromatin interactions |
ENSG00000211658 | chromatin interactions |
ENSG00000211682 | chromatin interactions |
ENSG00000252622 | chromatin interactions |
ENSG00000226420 | chromatin interactions |
ENSG00000211665 | chromatin interactions |
ENSG00000211674 | chromatin interactions |
ENSG00000237127 | chromatin interactions |
ENSG00000211663 | chromatin interactions |
ENSG00000100034 | chromatin interactions |
ENSG00000212102 | chromatin interactions |
ENSG00000211660 | chromatin interactions |
ENSG00000253822 | chromatin interactions |
ENSG00000177675 | chromatin interactions |
ENSG00000124635 | chromatin interactions |
ENSG00000222037 | chromatin interactions |
ENSG00000231969 | chromatin interactions |
ENSG00000126883 | chromatin interactions |
ENSG00000211664 | chromatin interactions |
ENSG00000100038 | chromatin interactions |
ENSG00000100023 | chromatin interactions |
ENSG00000254240 | chromatin interactions |
ENSG00000211641 | chromatin interactions |
ENSG00000211659 | chromatin interactions |
ENSG00000207830 | chromatin interactions |
ENSG00000211662 | chromatin interactions |
ENSG00000100218 | chromatin interactions |
ENSG00000100228 | chromatin interactions |
ENSG00000211677 | chromatin interactions |
ENSG00000186716 | chromatin interactions |
ENSG00000253786 | chromatin interactions |
ENSG00000211672 | chromatin interactions |
ENSG00000211667 | chromatin interactions |
ENSG00000207835 | chromatin interactions |
ENSG00000226595 | chromatin interactions |
ENSG00000211684 | chromatin interactions |
ENSG00000261135 | chromatin interactions |
ENSG00000211671 | chromatin interactions |
ENSG00000226477 | chromatin interactions |
ENSG00000254709 | chromatin interactions |
ENSG00000211673 | chromatin interactions |
ENSG00000253889 | chromatin interactions |
ENSG00000211648 | chromatin interactions |
ENSG00000211666 | chromatin interactions |
ENSG00000224144 | chromatin interactions |
ENSG00000185686 | chromatin interactions |
ENSG00000254029 | chromatin interactions |
ENSG00000207751 | chromatin interactions |
ENSG00000253590 | chromatin interactions |
ENSG00000264629 | chromatin interactions |
ENSG00000187556 | chromatin interactions |
ENSG00000253779 | chromatin interactions |
ENSG00000207836 | chromatin interactions |
ENSG00000232350 | chromatin interactions |
ENSG00000253152 | chromatin interactions |
ENSG00000211661 | chromatin interactions |
ING4 | Mature miRNA region |
No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs372972830 | chr22:22794093-22794094 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
2 | rs9607881 | chr22:22794110-22794111 | Enhancers | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
3 | rs377485319 | chr22:22794128-22794129 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
4 | rs191222951 | chr22:22794160-22794161 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
5 | rs145796821 | chr22:22794196-22794197 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
6 | rs140676192 | chr22:22794198-22794199 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
7 | rs533423045 | chr22:22794269-22794270 | Enhancers | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
8 | rs115537133 | chr22:22794355-22794356 | Enhancers | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
9 | rs183510680 | chr22:22794358-22794359 | Enhancers | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
10 | rs374286254 | chr22:22794450-22794451 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
11 | rs113096169 | chr22:22794469-22794470 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
12 | rs562110387 | chr22:22794495-22794496 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
13 | rs189415742 | chr22:22794553-22794554 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
14 | rs145851037 | chr22:22794571-22794572 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
15 | rs570561200 | chr22:22794573-22794574 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
16 | rs202066766 | chr22:22794671-22794672 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
17 | rs532964030 | chr22:22794676-22794677 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
18 | rs576779955 | chr22:22794698-22794699 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
19 | rs549759599 | chr22:22794729-22794730 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
20 | rs569950422 | chr22:22794756-22794757 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
21 | rs146638660 | chr22:22794796-22794797 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
22 | rs181727351 | chr22:22794827-22794828 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
23 | rs187001341 | chr22:22794877-22794878 | Inactive region | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
24 | rs561253301 | chr22:22795493-22795494 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
25 | rs546777524 | chr22:22795512-22795513 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
26 | rs529082532 | chr22:22795530-22795531 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
27 | rs6002339 | chr22:22795542-22795543 | ZNF genes & repeats | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
28 | rs207477915 | chr22:22795554-22795555 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
29 | rs414296 | chr22:22795589-22795590 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
30 | rs141210264 | chr22:22795628-22795629 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
31 | rs114270317 | chr22:22795691-22795692 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
32 | rs75222818 | chr22:22795704-22795705 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
33 | rs372666621 | chr22:22795708-22795709 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
34 | rs143261093 | chr22:22795739-22795740 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
35 | rs539517648 | chr22:22795756-22795757 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
36 | rs113305317 | chr22:22795763-22795764 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
37 | rs367937003 | chr22:22795772-22795773 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
38 | rs556596830 | chr22:22795775-22795776 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
39 | rs11912989 | chr22:22795784-22795785 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
40 | rs542207106 | chr22:22795812-22795813 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
41 | rs201843740 | chr22:22795822-22795823 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
42 | rs555790785 | chr22:22795824-22795825 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
43 | rs551716662 | chr22:22795834-22795835 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
44 | rs186253612 | chr22:22795835-22795836 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
45 | rs9620029 | chr22:22795846-22795847 | ZNF genes & repeats | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
46 | rs564860736 | chr22:22795937-22795938 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
47 | rs372435132 | chr22:22795951-22795952 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
48 | rs533545264 | chr22:22795958-22795959 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
49 | rs543188191 | chr22:22795963-22795964 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
50 | rs550392818 | chr22:22795970-22795971 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
Disease | PMID | Source |
---|---|---|
Hodgkin''s lymphoma | 18641027 | CNVD |
Acute lymphoblastic leukemia | 22237106 | CNVD |
Esophageal squamous carcinoma | 21637470 | CNVD |
Glioblastoma multiforme | 21080181 | CNVD |
Velocardiofacial syndrome | 20111667 | CNVD |
Medulloblastoma | 21979893 | CNVD |
sporadic solitary meningiomas | 19589153 | CNVD |
Myofibroblastic sarcoma | 19369631 | CNVD |
Autism | 22495311 | CNVD |
Emanuel syndrome | 21549014 | CNVD |
Digeorge syndrome | 22283845 | CNVD |
Schizophrenia | 17504246 | CNVD |
Digeorge syndrome | 18033723 | CNVD |
22q11 deletion syndrome | 17034021 | CNVD |
22q11 deletion syndrome | 22511897 | CNVD |
22q11 deletion syndrome | 16829213 | CNVD |
Autism | 22067053 | CNVD |
Autism | 19218893 | CNVD |
Biliary cancer | 22067053 | CNVD |
Congenital heart defect | 21390462 | CNVD |
Digeorge syndrome | 16617304 | CNVD |
Emanuel syndrome | 18184694 | CNVD |
Non-syndromic sensorineural hearing loss | 18184694 | CNVD |
Obsessive-compulsive disorder | 22067053 | CNVD |
Psychosis | 22067053 | CNVD |
Schizophrenia | 19415332 | CNVD |
Schizophrenia | 20587603 | CNVD |
Shprintzen syndrome | 19443537 | CNVD |
absent pulmonary valve syndrome | 16795129 | CNVD |
language delay | 22067053 | CNVD |
periventricular nodular heterotopia | 20648244 | CNVD |
renal disease | 17924346 | CNVD |
Schizophrenia | 20433910 | CNVD |
22q11 deletion syndrome | 17028864 | CNVD |
Schizophrenia | 16969581 | CNVD |
Non-syndromic sensorineural hearing loss | 17135275 | CNVD |
velo-cardio-facial syndrome | 17135275 | CNVD |
Digeorge syndrome | 18787571 | CNVD |
Autism | 18925931 | CNVD |
Non-small cell lung cancer | 21829676 | CNVD |
22q11.2 microdeletion syndrome | 21547621 | CNVD |
Congenital heart defect | 21308838 | CNVD |
Digeorge syndrome | 16512914 | CNVD |
Digeorge syndrome | 20954168 | CNVD |
Nuchal translucency | 21837766 | CNVD |
Right aortic arch in the fetus | 17066500 | CNVD |
Shprintzen syndrome | 17117043 | CNVD |
Tetralogy of fallot | 17405110 | CNVD |
Velocardiofacial syndrome | 20140301 | CNVD |
Velocardiofacial syndrome | 16512914 | CNVD |
bone mass and metabolism | 20516202 | CNVD |
choanal atresia | 18209138 | CNVD |
extracardiac malformations | 17086578 | CNVD |
fetal heart defects | 21308838 | CNVD |
parathyroid gland dysfunction | 16793949 | CNVD |
prenatal diagnosis | 20453657 | CNVD |
velopharyngeal insufficiency | 19620585 | CNVD |
Prader-willi syndrome | 20942916 | CNVD |
22q11 deletion syndrome | 17653112 | CNVD |
Chronic myelomonocytic leukemia | 16760666 | CNVD |
Non-syndromic sensorineural hearing loss | 16829213 | CNVD |
Non-syndromic sensorineural hearing loss | 16760666 | CNVD |
Chordoma | 21602918 | CNVD |
Cancer | 21637783 | CNVD |
Non-syndromic sensorineural hearing loss | 18471307 | CNVD |
Splenic marginal zone lymphoma | 21957467 | CNVD |
Congenital heart defect | 22511896 | CNVD |
Breast cancer | 17603634 | CNVD |
Endometrial cancer | 22040021 | CNVD |
Burkitt''s lymphoma | 18698080 | CNVD |
Acute myeloid leukemia | 16864856 | CNVD |
Astrocytoma | 17387387 | CNVD |
Breast cancer | 21264507 | CNVD |
Glioblastoma multiforme | 17387387 | CNVD |
Seminomas | 18059402 | CNVD |
Cancer | 16751803 | CNVD |
Metanephric adenoma | 20802469 | CNVD |
T-cell prolymphocytic leukemia | 19278963 | CNVD |
Chronic lymphocytic leukemia | 21546498 | CNVD |
Colorectal cancer | 19359472 | CNVD |
Metachromatic leukodystrophy | 18421352 | CNVD |
Basal cell lymphoma | 17170743 | CNVD |
Gastrointestinal stromal cancer | 19259404 | CNVD |
Gastrointestinal stromal cancer | 20470368 | CNVD |
Gastrointestinal stromal cancer | 17535989 | CNVD |
Paraganglioma | 17535989 | CNVD |
Pulmonary chondroma | 17535989 | CNVD |
Breast cancer | 21858162 | CNVD |
Myelodysplastic syndrome | 21251322 | CNVD |
Acute myeloid leukemia | 20729466 | CNVD |
Breast cancer | 21509527 | CNVD |
Hodgkin''s lymphoma | 17606441 | CNVD |
Prostate cancer | 18632612 | CNVD |
Cat eye syndrome | 21549014 | CNVD |
Digeorge syndrome | 21549014 | CNVD |
22q11.2 microdeletion syndrome | 22051516 | CNVD |
22q11.2 microdeletion syndrome | 18483005 | CNVD |
22q11.2 microdeletion syndrome | 19565140 | CNVD |
22q11.2 microdeletion syndrome | 20396437 | CNVD |
22q11.2 microdeletion syndrome | 21390462 | CNVD |
22q11.2 microdeletion syndrome | 21573985 | CNVD |
Austim spectrum disorder | 21302340 | CNVD |
Autism | 20970697 | CNVD |
Bipolar disorder | 19114987 | CNVD |
Congenital heart defect | 21257016 | CNVD |
Developmental delay | 18414209 | CNVD |
DiGeorge-Velo cardiofacial | 19284877 | CNVD |
Epilepsy | 20970697 | CNVD |
Heart disease | 20551144 | CNVD |
Hughes'' syndrome | 16595601 | CNVD |
Mental retardation | 18414209 | CNVD |
Okamoto syndrome | 19046188 | CNVD |
Primary immunodeficiency | 22566803 | CNVD |
Schizophrenia | 20877625 | CNVD |
Schizophrenia | 20553308 | CNVD |
Schizophrenia | 21956041 | CNVD |
Schizophrenia | 20970697 | CNVD |
Tetralogy of Fallot | 22912587 | CNVD |
Velocardiofacial syndrome | 17556857 | CNVD |
Velocardiofacial syndrome | 20206275 | CNVD |
Velocardiofacial syndrome | 20970697 | CNVD |
delayed speech development | 21274400 | CNVD |
velo-cardio-facial syndrome | 16511839 | CNVD |
velo-cardio-facial syndrome | 21763005 | CNVD |
22q11.2 microdeletion syndrome | 18799940 | CNVD |
Digeorge syndrome | 20877625 | CNVD |
22q11.2 microdeletion syndrome | 18923514 | CNVD |
Congenital heart defect | 22185286 | CNVD |
DiGeorge-Velo cardiofacial | 16773131 | CNVD |
Digeorge syndrome | 20186050 | CNVD |
velo-cardio-facial conotruncal-face syndrome | 20186050 | CNVD |
22q11.2 microdeletion syndrome | 22116936 | CNVD |
Disorders of sex development | 22290220 | CNVD |
22q11.2 duplication syndrome | 18923514 | CNVD |
Autism | 22095694 | CNVD |
Mental retardation | 19951919 | CNVD |
Honadal dysgenesis | 21048976 | CNVD |
Mental retardation | 16773131 | CNVD |
22q11.2 microdeletion syndrome | 22395003 | CNVD |
22q11.2 microdeletion syndrome | 18691436 | CNVD |
22q11.2 microdeletion syndrome | 18053182 | CNVD |
22q11.2 microdeletion syndrome | 18324686 | CNVD |
22q11.2 microdeletion syndrome | 20074913 | CNVD |
Congenital heart defect | 20802965 | CNVD |
Congenital heart defect | 21134246 | CNVD |
DiGeorge syndrome | 19040613 | CNVD |
DiGeorge-Velo cardiofacial | 18179902 | CNVD |
Digeorge syndrome | 18172682 | CNVD |
Digeorge syndrome | 22470819 | CNVD |
Digeorge syndrome | 21364285 | CNVD |
Neuroendocrine carcinoma | 22470819 | CNVD |
Non-syndromic sensorineural hearing loss | 20069674 | CNVD |
Smith-Magenis syndrome | 18301319 | CNVD |
Tetralogy of fallot | 19144126 | CNVD |
Velo-cardio-facial syndrome | 21364285 | CNVD |
Velocardiofacial syndrome | 18788013 | CNVD |
cardiac malformation | 20573211 | CNVD |
cardiac malformation | 18172682 | CNVD |
velo-cardio-facial syndrome | 18636631 | CNVD |
Schizophrenia | 21822266 | CNVD |
synaptic plasticity | 21368174 | CNVD |
Schizophrenia | 18043741 | CNVD |
sporadic birth defects | 19047251 | CNVD |
Autism | 19046189 | CNVD |
DiGeorge-Velo cardiofacial | 19047251 | CNVD |
Hypernasal speech | 21968682 | CNVD |
Mental retardation | 17339581 | CNVD |
diverse phenotype | 16760730 | CNVD |
Mental retardation | 20152051 | CNVD |
Breast cancer | 16608533 | CNVD |
Melanoma | 18172304 | CNVD |
Ovarian cancer | 22174824 | CNVD |
T-cell prolymphocytic leukemia | 17713554 | CNVD |
Wilms tumour | 21544195 | CNVD |
Acute myeloid leukemia | 21251322 | CNVD |
DiGeorge-Velo cardiofacial | 17597781 | CNVD |
Digeorge syndrome | 17576883 | CNVD |
Schizophrenia | 18806272 | CNVD |
Schizophrenia | 18990708 | CNVD |
Velocardiofacial syndrome | 17576883 | CNVD |
Schizophrenia | 20075378 | CNVD |
Neurodevelopmental disorder | 17015230 | CNVD |
Neuropsychiatric disorder | 20069037 | CNVD |
Williams-beuren syndrome | 18553513 | CNVD |
Emphysema | 19352772 | CNVD |
Cancer | 17440070 | CNVD |
Endometrioid adenocarcinoma | 16974079 | CNVD |
Disease | 21346257 | CNVD |
Breast cancer | 20668451 | CNVD |
Cancer | 20668451 | CNVD |
Lung cancer | 20668451 | CNVD |
Ovarian cancer | 20668451 | CNVD |
Pancreas cancer | 20668451 | CNVD |
Prostate cancer | 20668451 | CNVD |
Developmental delay | 21147756 | CNVD |
low-grade B-cell lymphoma tumor | 18367492 | CNVD |
Cutaneous T-cell lymphoma | 21881587 | CNVD |
Myelofibrosis | 22110671 | CNVD |
Asthma | 21956041 | CNVD |
Glioblastoma multiforme | 22286061 | CNVD |
Colorectal cancer | 21128281 | CNVD |
Systemic lupus erythematosus | 21956041 | CNVD |
Primary central nervous system lymphoma | 21088137 | CNVD |
22q11.23 microdeletion syndrome | 19193630 | CNVD |
Acute lymphoblastic leukemia | 21248843 | CNVD |
Urothelial carcinoma | 21177765 | CNVD |
Chronic myeloid leukemia | 21384125 | CNVD |
Autism | 20841430 | CNVD |
Cancer | 20164919 | CNVD |
Multiple myeloma | 17550852 | CNVD |
Breast cancer | 21785460 | CNVD |
small cell lung cancer | 20016488 | CNVD |
Medullary thyroid carcinoma | 18765511 | CNVD |
Lung cancer | 18438408 | CNVD |
Breast cancer | 22522925 | CNVD |
Barrett''s syndrome | 19417022 | CNVD |
Non-syndromic sensorineural hearing loss | 22037309 | CNVD |
Pancreatic cancer | 17952125 | CNVD |
Ependymoma | 20639864 | CNVD |
Non-syndromic sensorineural hearing loss | 21293372 | CNVD |
Schizophrenia | 17989066 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr22:22793800-22794400 | Enhancers | Primary B cells from peripheral blood | blood |
2 | chr22:22795400-22796000 | ZNF genes & repeats | iPS DF 19.11 Cell Line | embryonic stem cell |
3 | chr22:22800600-22801400 | Enhancers | HSMM | muscle |
4 | chr22:22800600-22801800 | Enhancers | HSMMtube | muscle |
5 | chr22:22800800-22801000 | Bivalent Enhancer | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
6 | chr22:22800800-22801000 | Bivalent Enhancer | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
7 | chr22:22801200-22801800 | Enhancers | Fetal Muscle Leg | muscle |
8 | chr22:22803600-22806600 | Enhancers | Primary B cells from cord blood | blood |
9 | chr22:22803600-22807000 | Enhancers | Primary B cells from peripheral blood | blood |
10 | chr22:22804200-22805400 | Enhancers | GM12878-XiMat | blood |
11 | chr22:22804400-22805000 | Enhancers | Primary Natural Killer cells fromperipheralblood | blood |
12 | chr22:22804600-22804800 | Bivalent Enhancer | Primary monocytes fromperipheralblood | blood |
13 | chr22:22804600-22805000 | Bivalent Enhancer | Fetal Adrenal Gland | Adrenal Gland |
14 | chr22:22804600-22805000 | Enhancers | Spleen | Spleen |
15 | chr22:22804600-22805400 | Enhancers | Primary hematopoietic stem cells short term culture | blood |
16 | chr22:22804800-22805000 | Bivalent Enhancer | Primary T cells fromperipheralblood | blood |
17 | chr22:22804800-22805000 | Enhancers | Right Atrium | heart |
18 | chr22:22804800-22805400 | Enhancers | Primary monocytes fromperipheralblood | blood |
19 | chr22:22804800-22805400 | Enhancers | Monocytes-CD14+_RO01746 | blood |
20 | chr22:22805000-22805200 | Bivalent Enhancer | Foreskin Melanocyte Primary Cells skin01 | Skin |
21 | chr22:22805200-22807200 | Weak transcription | Right Atrium | heart |
22 | chr22:22806600-22806800 | Bivalent Enhancer | H1 Cell Line | embryonic stem cell |
23 | chr22:22809000-22809200 | Bivalent Enhancer | H1 Cell Line | embryonic stem cell |
24 | chr22:22812800-22813000 | ZNF genes & repeats | ES-UCSF4 Cell Line | embryonic stem cell |
25 | chr22:22813400-22814400 | ZNF genes & repeats | Right Atrium | heart |
26 | chr22:22813600-22815000 | ZNF genes & repeats | Pancreatic Islets | Pancreatic Islet |
27 | chr22:22814000-22814200 | Bivalent Enhancer | H1 Cell Line | embryonic stem cell |
28 | chr22:22814400-22814600 | ZNF genes & repeats | ES-UCSF4 Cell Line | embryonic stem cell |
29 | chr22:22815800-22832800 | Weak transcription | Right Atrium | heart |
30 | chr22:22817000-22818800 | Enhancers | Primary B cells from cord blood | blood |
31 | chr22:22817200-22818800 | Enhancers | Primary B cells from peripheral blood | blood |
32 | chr22:22817800-22818400 | Bivalent Enhancer | Primary hematopoietic stem cells | blood |
33 | chr22:22818000-22818200 | Bivalent Enhancer | H1 Cell Line | embryonic stem cell |
34 | chr22:22818000-22818600 | Bivalent Enhancer | Primary T cells fromperipheralblood | blood |
35 | chr22:22818200-22818400 | Bivalent Enhancer | Primary T helper memory cells from peripheral blood 1 | blood |
36 | chr22:22818200-22818400 | Bivalent Enhancer | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
37 | chr22:22818200-22818400 | Bivalent Enhancer | Cortex derived primary cultured neurospheres | brain |
38 | chr22:22818200-22818600 | Bivalent Enhancer | Primary T helper cells PMA-I stimulated | -- |
39 | chr22:22818200-22818600 | Bivalent Enhancer | Fetal Brain Female | brain |
40 | chr22:22818200-22818600 | Enhancers | HSMMtube | muscle |
41 | chr22:22818200-22818800 | Enhancers | Brain Anterior Caudate | brain |
42 | chr22:22818400-22818600 | Bivalent Enhancer | Primary T helper cells fromperipheralblood | blood |
43 | chr22:22818600-22818800 | Bivalent Enhancer | iPS-15b Cell Line | embryonic stem cell |
44 | chr22:22818600-22818800 | Flanking Active TSS | A549 | lung |
45 | chr22:22818600-22818800 | Flanking Active TSS | HSMMtube | muscle |
46 | chr22:22818600-22819000 | Bivalent Enhancer | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
47 | chr22:22818600-22819000 | Bivalent Enhancer | HSMM | muscle |
48 | chr22:22818600-22819000 | Flanking Bivalent TSS/Enh | K562 | blood |
49 | chr22:22818800-22819000 | Bivalent Enhancer | H1 Cell Line | embryonic stem cell |
50 | chr22:22818800-22819000 | Bivalent/Poised TSS | A549 | lung |