Variant report

Variant nsv1062441
Chromosome Location chr20:23861343-23955100
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:307 , 50 per page) page: 1 2 3 4 5 6 7
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:23852400-23864800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
2 chr20:23858200-23862800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
3 chr20:23859200-23861800 Enhancers Lung lung
4 chr20:23859400-23861400 Enhancers Placenta Amnion Placenta Amnion
5 chr20:23859400-23862400 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr20:23859800-23862400 Enhancers Pancreas Pancrea
7 chr20:23860000-23861600 Enhancers Rectal Smooth Muscle rectum
8 chr20:23860000-23862200 Enhancers HepG2 liver
9 chr20:23860200-23861600 Enhancers Fetal Intestine Large intestine
10 chr20:23860400-23861400 Bivalent Enhancer Fetal Adrenal Gland Adrenal Gland
11 chr20:23860600-23861400 Enhancers Fetal Lung lung
12 chr20:23860600-23861600 Enhancers Duodenum Smooth Muscle Duodenum
13 chr20:23860600-23861600 Bivalent Enhancer Fetal Stomach stomach
14 chr20:23860600-23861800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
15 chr20:23860600-23862200 Enhancers HMEC breast
16 chr20:23860600-23862400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
17 chr20:23860800-23861800 Weak transcription ES-I3 Cell Line embryonic stem cell
18 chr20:23860800-23862200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
19 chr20:23861000-23864600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
20 chr20:23861200-23861400 Flanking Active TSS Stomach Smooth Muscle stomach
21 chr20:23861200-23861800 Enhancers NHEK skin
22 chr20:23861400-23862200 Enhancers Esophagus oesophagus
23 chr20:23861400-23862400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
24 chr20:23861400-23864400 Weak transcription Placenta Amnion Placenta Amnion
25 chr20:23861600-23861800 Weak transcription Duodenum Smooth Muscle Duodenum
26 chr20:23861600-23862200 Enhancers Placenta Placenta
27 chr20:23861800-23862000 Enhancers ES-I3 Cell Line embryonic stem cell
28 chr20:23862200-23862400 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
29 chr20:23862200-23862400 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
30 chr20:23862200-23863800 Weak transcription Placenta Placenta
31 chr20:23862200-23866400 Weak transcription Esophagus oesophagus
32 chr20:23862400-23862800 Bivalent Enhancer Foreskin Melanocyte Primary Cells skin01 Skin
33 chr20:23862400-23863400 Weak transcription Pancreas Pancrea
34 chr20:23863400-23864200 Enhancers Pancreas Pancrea
35 chr20:23863800-23865400 Enhancers Placenta Placenta
36 chr20:23864400-23865400 Enhancers Placenta Amnion Placenta Amnion
37 chr20:23864600-23865400 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
38 chr20:23864800-23865000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
39 chr20:23865400-23870400 Weak transcription Placenta Placenta
40 chr20:23866400-23866600 Enhancers Esophagus oesophagus
41 chr20:23866600-23870000 Weak transcription Esophagus oesophagus
42 chr20:23868000-23868400 Enhancers Right Atrium heart
43 chr20:23868000-23868600 Enhancers Fetal Thymus thymus
44 chr20:23868600-23870000 Weak transcription Fetal Thymus thymus
45 chr20:23870000-23870200 Enhancers Esophagus oesophagus
46 chr20:23870000-23870800 Enhancers Fetal Thymus thymus
47 chr20:23870200-23871000 Enhancers Dnd41 blood
48 chr20:23870200-23871200 Enhancers Primary T cells fromperipheralblood blood
49 chr20:23870400-23870800 Enhancers Placenta Placenta
50 chr20:23870400-23871000 Enhancers Primary T killer naive cells fromperipheralblood blood

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