Variant report

Variant	nsv1063442
Chromosome Location	chr20:52400519-52428220
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:608)
CpG islands
(count:0)
Chromatin interactive
region (count:173)
LncRNA
region (count:3)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:608 , 50 per page) page: 1 2 3 4 5 6 7 ... 13

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr20:52417105-52418159	HepG2	liver:	n/a	n/a
2	ARID3A	chr20:52404373-52404397	K562	blood:	n/a	n/a
3	ARID3A	chr20:52403070-52403849	HepG2	liver:	n/a	n/a
4	ARID3A	chr20:52416222-52416633	HepG2	liver:	n/a	n/a
5	ARID3A	chr20:52407811-52407933	K562	blood:	n/a	n/a
6	ARID3A	chr20:52417310-52417685	K562	blood:	n/a	n/a
7	ATF1	chr20:52417338-52417741	K562	blood:	n/a	n/a
8	ATF3	chr20:52421889-52422818	A549	lung:	n/a	n/a
9	ATF3	chr20:52422257-52422799	A549	lung:	n/a	n/a
10	BACH1	chr20:52406118-52406487	K562	blood:	n/a	chr20:52406302-52406316
11	BACH1	chr20:52405935-52406651	H1-hESC	embryonic stem cell:	n/a	chr20:52406302-52406316
12	BCL3	chr20:52421318-52422921	A549	lung:	n/a	chr20:52422571-52422580
13	BCL3	chr20:52405967-52406673	A549	lung:	n/a	chr20:52406304-52406313
14	BCL3	chr20:52421386-52422856	A549	lung:	n/a	chr20:52422571-52422580
15	BHLHE40	chr20:52417367-52417954	HepG2	liver:	n/a	n/a
16	BHLHE40	chr20:52407709-52407998	K562	blood:	n/a	n/a
17	BHLHE40	chr20:52417342-52418003	K562	blood:	n/a	n/a
18	BHLHE40	chr20:52403186-52403212	K562	blood:	n/a	n/a
19	BHLHE40	chr20:52403078-52403185	GM12878	blood:	n/a	n/a
20	BRCA1	chr20:52417454-52417780	HepG2	liver:	n/a	n/a
21	CEBPB	chr20:52408172-52412263	MCF-7	breast:	n/a	chr20:52410551-52410562 chr20:52410911-52410924
22	CEBPB	chr20:52421398-52422316	A549	lung:	n/a	chr20:52421706-52421717 chr20:52421627-52421638
23	CEBPB	chr20:52405961-52406990	A549	lung:	n/a	n/a
24	CEBPB	chr20:52422389-52422728	IMR90	lung:	n/a	n/a
25	CEBPB	chr20:52400399-52400580	A549	lung:	n/a	chr20:52400452-52400463
26	CEBPB	chr20:52406766-52406769	H1-hESC	embryonic stem cell:	n/a	n/a
27	CEBPB	chr20:52410385-52410723	HepG2	liver:	n/a	chr20:52410551-52410562
28	CEBPB	chr20:52413753-52413938	HepG2	liver:	n/a	n/a
29	CEBPB	chr20:52406115-52406814	IMR90	lung:	n/a	n/a
30	CEBPB	chr20:52417471-52417773	HepG2	liver:	n/a	n/a
31	CEBPB	chr20:52403417-52403883	A549	lung:	n/a	n/a
32	CEBPB	chr20:52400284-52400636	HepG2	liver:	n/a	chr20:52400452-52400463
33	CEBPB	chr20:52403516-52403810	HepG2	liver:	n/a	n/a
34	CEBPB	chr20:52406138-52406871	A549	lung:	n/a	n/a
35	CEBPB	chr20:52410390-52410705	IMR90	lung:	n/a	chr20:52410551-52410562
36	CEBPB	chr20:52413733-52413956	K562	blood:	n/a	n/a
37	CEBPB	chr20:52410471-52410684	A549	lung:	n/a	chr20:52410551-52410562
38	CEBPB	chr20:52417260-52417791	HepG2	liver:	n/a	n/a
39	CEBPB	chr20:52422317-52422884	A549	lung:	n/a	n/a
40	CEBPB	chr20:52410439-52410515	H1-hESC	embryonic stem cell:	n/a	n/a
41	CEBPB	chr20:52421283-52423021	A549	lung:	n/a	chr20:52421706-52421717 chr20:52421627-52421638
42	CEBPB	chr20:52401662-52405647	MCF-7	breast:	n/a	n/a
43	CEBPB	chr20:52421508-52422857	A549	lung:	n/a	chr20:52421706-52421717 chr20:52421627-52421638
44	CEBPB	chr20:52403485-52403839	A549	lung:	n/a	n/a
45	CEBPB	chr20:52421573-52421706	HepG2	liver:	n/a	chr20:52421627-52421638
46	CEBPB	chr20:52422396-52422707	Hela-S3	cervix:	n/a	n/a
47	CEBPB	chr20:52425895-52425964	H1-hESC	embryonic stem cell:	n/a	n/a
48	CEBPB	chr20:52421080-52424023	MCF-7	breast:	n/a	chr20:52421706-52421717 chr20:52421627-52421638
49	CEBPB	chr20:52401891-52403113	A549	lung:	n/a	n/a
50	CEBPB	chr20:52403360-52403970	A549	lung:	n/a	n/a

No data

(count:173 , 50 per page) page: 1 2 3 4

No.	Distal block	Cell Line	Cell type
1	chr20:52409863..52410427-chr20:55821112..55822035,2	MCF-7	breast:
2	chr20:52237620..52238932-chr20:52402192..52403139,3	MCF-7	breast:
3	chr17:56755338..56757573-chr20:52419856..52422679,2	MCF-7	breast:
4	chr20:52401336..52404306-chr8:103874838..103877830,2	MCF-7	breast:
5	chr20:52406932..52408053-chr20:52556127..52557209,4	MCF-7	breast:
6	chr20:52414372..52415082-chr20:52424509..52425462,2	MCF-7	breast:
7	chr20:45986288..45987789-chr20:52401390..52404325,2	MCF-7	breast:
8	chr20:52327522..52328088-chr20:52402420..52403231,2	MCF-7	breast:
9	chr20:52402271..52403940-chr20:52480276..52481396,7	MCF-7	breast:
10	chr20:52426098..52427012-chr20:52488848..52489619,3	MCF-7	breast:
11	chr20:52391167..52393135-chr20:52407671..52409754,2	K562	blood:
12	chr20:52416160..52417780-chr3:64007090..64009548,2	MCF-7	breast:
13	chr17:57915032..57917929-chr20:52420971..52423307,2	MCF-7	breast:
14	chr20:52419694..52421306-chr22:50420720..50422499,2	MCF-7	breast:
15	chr10:74855154..74857176-chr20:52422603..52424499,2	MCF-7	breast:
16	chr20:52404288..52406884-chr20:52421776..52423435,2	K562	blood:
17	chr20:52341497..52342164-chr20:52401978..52402911,2	MCF-7	breast:
18	chr20:52417105..52418792-chr20:55840075..55841821,2	MCF-7	breast:
19	chr17:59474142..59479097-chr20:52403146..52407414,5	MCF-7	breast:
20	chr17:59477203..59479502-chr20:52406823..52408821,2	MCF-7	breast:
21	chr20:52401119..52404039-chr21:41758413..41760335,2	MCF-7	breast:
22	chr1:149859688..149862015-chr20:52420095..52422543,2	MCF-7	breast:
23	chr17:56707901..56710252-chr20:52413457..52417061,3	MCF-7	breast:
24	chr20:52401639..52403990-chr20:52486019..52487230,15	MCF-7	breast:
25	chr20:52422157..52422923-chr20:52486273..52486879,2	MCF-7	breast:
26	chr17:56734940..56737605-chr20:52402876..52404399,2	MCF-7	breast:
27	chr20:52423342..52425521-chr20:55839354..55842301,2	MCF-7	breast:
28	chr20:52386923..52389172-chr20:52424998..52427663,3	K562	blood:
29	chr13:115044907..115047274-chr20:52401538..52403946,2	MCF-7	breast:
30	chr20:52401773..52405148-chr20:55839891..55841915,4	MCF-7	breast:
31	chr20:52421541..52422373-chr20:52765421..52765961,2	MCF-7	breast:
32	chr2:117073210..117074730-chr20:52401599..52404302,2	MCF-7	breast:
33	chr20:52403738..52404269-chr20:52481124..52481895,2	MCF-7	breast:
34	chr20:52194989..52195626-chr20:52407310..52408251,3	MCF-7	breast:
35	chr20:52423838..52425788-chr8:37552737..37554558,2	MCF-7	breast:
36	chr20:52407736..52410525-chr7:108165406..108166924,2	MCF-7	breast:
37	chr20:45986023..45988935-chr20:52406198..52408499,2	MCF-7	breast:
38	chr20:52410629..52412192-chr20:55840697..55842515,2	MCF-7	breast:
39	chr20:52427479..52429707-chr3:51531847..51534607,2	MCF-7	breast:
40	chr20:52414372..52415082-chr20:52424509..52425462,2	MCF-7	breast:
41	chr20:52229214..52229879-chr20:52401623..52402514,2	MCF-7	breast:
42	chr17:57922372..57924896-chr20:52421508..52424076,4	MCF-7	breast:
43	chr20:52421177..52423554-chr3:62307174..62309545,2	MCF-7	breast:
44	chr20:52407579..52410186-chr5:90512301..90513847,2	MCF-7	breast:
45	chr20:52420212..52422332-chr4:120132097..120135086,2	MCF-7	breast:
46	chr20:52425694..52426394-chr20:52488503..52489498,2	MCF-7	breast:
47	chr11:122931494..122933593-chr20:52412455..52415144,2	MCF-7	breast:
48	chr20:52401511..52403835-chr20:55849653..55852433,2	MCF-7	breast:
49	chr20:52419455..52422452-chr20:55824806..55826636,2	MCF-7	breast:
50	chr17:57915941..57918627-chr20:52402974..52405387,3	MCF-7	breast:

(count:3 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-BCAS1-1	chr20:52417665-52418124	NONHSAT080403
2	lnc-BCAS1-1	chr20:52417682-52417857	XLOC_013802
3	lnc-BCAS1-1	chr20:52416362-52416530	XLOC_013802

No data

Variant related genes	Relation type
ENSG00000225563	TF binding region
ENSG00000163636	chromatin interactions
ENSG00000169062	chromatin interactions
ENSG00000240972	chromatin interactions
ENSG00000160200	chromatin interactions
ENSG00000166477	chromatin interactions
ENSG00000178636	chromatin interactions
ENSG00000101115	chromatin interactions
ENSG00000235527	chromatin interactions
ENSG00000253320	chromatin interactions
ENSG00000115904	chromatin interactions
ENSG00000054793	chromatin interactions
ENSG00000170832	chromatin interactions
ENSG00000202077	chromatin interactions
ENSG00000141371	chromatin interactions
ENSG00000196562	chromatin interactions
ENSG00000145390	chromatin interactions
ENSG00000172890	chromatin interactions
ENSG00000008405	chromatin interactions
ENSG00000267131	chromatin interactions
ENSG00000155096	chromatin interactions
ENSG00000236352	chromatin interactions
ENSG00000101144	chromatin interactions
ENSG00000114405	chromatin interactions
ENSG00000127884	chromatin interactions
ENSG00000141376	chromatin interactions
ENSG00000212195	chromatin interactions
ENSG00000267280	chromatin interactions
ENSG00000109971	chromatin interactions
ENSG00000235415	chromatin interactions
ENSG00000162231	chromatin interactions
ENSG00000172115	chromatin interactions
ENSG00000201558	chromatin interactions
ENSG00000163349	chromatin interactions
ENSG00000122884	chromatin interactions
ENSG00000150991	chromatin interactions
ENSG00000241472	chromatin interactions
ENSG00000199004	chromatin interactions
ENSG00000200997	chromatin interactions
ENSG00000226308	chromatin interactions
ENSG00000201524	chromatin interactions
ENSG00000121068	chromatin interactions
ENSG00000168439	chromatin interactions
ENSG00000135241	chromatin interactions
ENSG00000257548	chromatin interactions
ENSG00000147789	chromatin interactions
ENSG00000062716	chromatin interactions
ENSG00000225563	chromatin interactions
ENSG00000145041	chromatin interactions
ENSG00000101132	chromatin interactions
ENSG00000183779	chromatin interactions
ENSG00000265345	chromatin interactions
ENSG00000167470	chromatin interactions
ENSG00000130699	chromatin interactions
ENSG00000136492	chromatin interactions
IGFBP5	miRNA target sites
EID1	miRNA target sites

Extended variants
information (count: 1190 )
Associated
traits (count: 81 )

Variant overlapped rSNPs/rCNVs (count:1190 , 50 per page) page: 1 2 3 4 5 6 7 ... 24

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs181286095	chr20:52400567-52400568	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
2	rs186855367	chr20:52400575-52400576	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs528911366	chr20:52400585-52400586	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs548681437	chr20:52400599-52400600	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs367714159	chr20:52400612-52400613	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
6	rs559488441	chr20:52400617-52400618	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
7	rs189925706	chr20:52400622-52400623	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
8	rs551762885	chr20:52400629-52400630	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
9	rs571941587	chr20:52400649-52400650	Weak transcription Enhancers ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
10	rs116398156	chr20:52400650-52400651	Weak transcription Enhancers ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
11	rs569651228	chr20:52400662-52400663	Weak transcription Enhancers ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
12	rs370561987	chr20:52400671-52400672	Weak transcription Enhancers ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
13	rs34630436	chr20:52400696-52400697	Weak transcription Enhancers ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
14	rs550999438	chr20:52400736-52400737	Weak transcription Enhancers ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
15	rs6126949	chr20:52400806-52400807	Weak transcription Enhancers ZNF genes & repeats	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
16	rs536702986	chr20:52400810-52400811	Weak transcription Enhancers ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
17	rs553518381	chr20:52400830-52400831	Weak transcription Enhancers ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
18	rs182093304	chr20:52400842-52400843	Weak transcription Enhancers ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
19	rs375883797	chr20:52400902-52400903	Weak transcription Enhancers ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
20	rs534853313	chr20:52400906-52400907	Weak transcription Enhancers ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
21	rs113921542	chr20:52400923-52400924	Weak transcription Enhancers ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
22	rs116281522	chr20:52400963-52400964	Weak transcription Enhancers ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
23	rs577917728	chr20:52400969-52400970	Weak transcription Enhancers ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
24	rs186247117	chr20:52400971-52400972	Weak transcription Enhancers ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
25	rs6063996	chr20:52401007-52401008	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
26	rs191052985	chr20:52401036-52401037	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
27	rs180708043	chr20:52401054-52401055	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
28	rs559048225	chr20:52401141-52401142	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
29	rs374141040	chr20:52401226-52401227	Weak transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
30	rs528659653	chr20:52401236-52401237	Weak transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
31	rs75731993	chr20:52401268-52401269	Weak transcription	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
32	rs572306962	chr20:52401309-52401310	Weak transcription	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
33	rs551989850	chr20:52401315-52401316	Weak transcription	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
34	rs375639638	chr20:52401325-52401326	Weak transcription	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
35	rs185098244	chr20:52401345-52401346	Weak transcription	Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
36	rs74179239	chr20:52401398-52401399	Weak transcription	Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
37	rs141926036	chr20:52401399-52401400	Weak transcription	Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
38	rs35157282	chr20:52401420-52401421	Weak transcription	Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
39	rs531187510	chr20:52401445-52401446	Weak transcription	Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
40	rs551304070	chr20:52401450-52401451	Weak transcription	Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
41	rs115232600	chr20:52401483-52401484	Weak transcription	Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
42	rs67444248	chr20:52401499-52401500	Weak transcription	Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
43	rs554952965	chr20:52401523-52401524	Weak transcription	Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
44	rs6126950	chr20:52401541-52401542	Weak transcription	Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
45	rs6091743	chr20:52401548-52401549	Weak transcription	Chromatin interactive region	11 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
46	rs547101415	chr20:52401577-52401578	Weak transcription	Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
47	rs6068663	chr20:52401610-52401611	Weak transcription Enhancers	Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
48	rs567011748	chr20:52401661-52401662	Weak transcription Enhancers	Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
49	rs534515361	chr20:52401678-52401679	Weak transcription Enhancers	Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
50	rs113955500	chr20:52401692-52401693	Weak transcription Enhancers	Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:81)

Disease	PMID	Source
Gastric cancer	17908304	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Medulloblastoma	21979893	CNVD
Urothelial carcinoma	21177765	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Ewing''s sarcoma	17952124	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Colorectal cancer	21645411	CNVD
Pancreatic endocrine tumor	17639061	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Melanoma	21693616	CNVD
Acute myeloid leukemia	16864856	CNVD
Astrocytoma	17387387	CNVD
Endometrial cancer	22040021	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Hepatocellular carcinoma	22174799	CNVD
colon cancer	17210682	CNVD
Colorectal cancer	20709793	CNVD
Breast cancer	22028636	CNVD
Breast cancer	21264507	CNVD
Thyroid cancer	19087340	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Colorectal cancer	19359472	CNVD
Gastric cancer	17167181	CNVD
Myeloproliferative neoplasm	19047681	CNVD
Breast cancer	17899364	CNVD
Colorectal cancer	16272173	CNVD
Human rectal carcinomas	16397240	CNVD
Olfactory neuroblastoma	18408657	CNVD
Breast cancer	17603634	CNVD
Melanoma	18172304	CNVD
Breast cancer	16608533	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Breast cancer	17133270	CNVD
Oral cancer	21386901	CNVD
Acute myeloid leukemia	21251322	CNVD
small cell lung cancer	20016488	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Ewing''s sarcoma	18628472	CNVD
Glioblastoma multiforme	18628472	CNVD
Leukemia	18628472	CNVD
Acute myeloid leukemia	20729466	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Myelodysplastic syndrome	21251322	CNVD
Ductal carcinoma	22052326	CNVD
Acute lymphoblastic leukemia	18458336	CNVD
Colorectal cancer	16774939	CNVD
Non-small cell lung cancer	21829676	CNVD
Ovarian neoplasms	16753589	CNVD
Gastric cancer	20585902	CNVD
Ductal carcinoma	18381933	CNVD
Cancer	21129771	CNVD
Cancer	21183584	CNVD
Non-small cell lung cancer	20864512	CNVD
Ovarian cancer	22174824	CNVD
Lung cancer	16740712	CNVD
Wilms tumour	21544195	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Breast cancer	16620391	CNVD
Okamoto syndrome	17623483	CNVD
Breast cancer	21858162	CNVD
Breast cancer	21785460	CNVD
Bladder cancer	21909424	CNVD
Biliary cancer	19435499	CNVD
Myelofibrosis	22110671	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Barrett''s adenocarcinoma	18663352	CNVD
Cervical cancer	16585170	CNVD
Ovarian cancer	20844748	CNVD
Hirschsprung''s Disease	21712996	CNVD
Breast cancer	21364760	CNVD
Breast cancer	20459607	CNVD
Gastric cancer	18160780	CNVD
Anaplastic large cell lymphoma	18179710	CNVD
Lung cancer	18438408	CNVD
Breast cancer	21509527	CNVD

Chromatin state (count:490 , 50 per page) page: 1 2 3 4 5 6 7 ... 10

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr20:52390200-52403400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr20:52395200-52402000	Weak transcription	Pancreas	Pancrea
3	chr20:52396800-52402000	Weak transcription	Stomach Mucosa	stomach
4	chr20:52397600-52400600	Weak transcription	A549	lung
5	chr20:52399800-52401000	Enhancers	Placenta	Placenta
6	chr20:52400000-52401200	Enhancers	HepG2	liver
7	chr20:52400600-52401000	ZNF genes & repeats	A549	lung
8	chr20:52401000-52401800	Weak transcription	A549	lung
9	chr20:52401000-52402000	Weak transcription	Placenta	Placenta
10	chr20:52401200-52401600	Weak transcription	HepG2	liver
11	chr20:52401600-52402800	Enhancers	HepG2	liver
12	chr20:52401800-52402000	Enhancers	Rectal Mucosa Donor 31	rectum
13	chr20:52401800-52402000	Enhancers	A549	lung
14	chr20:52401800-52402400	Enhancers	Rectal Mucosa Donor 29	rectum
15	chr20:52401800-52403800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
16	chr20:52401800-52403800	Enhancers	Primary B cells from peripheral blood	blood
17	chr20:52401800-52404000	Enhancers	Liver	Liver
18	chr20:52401800-52404200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
19	chr20:52401800-52404200	Enhancers	NHEK	skin
20	chr20:52402000-52402200	Enhancers	Esophagus	oesophagus
21	chr20:52402000-52402400	Enhancers	Pancreas	Pancrea
22	chr20:52402000-52403000	Flanking Active TSS	Rectal Mucosa Donor 31	rectum
23	chr20:52402000-52403600	Enhancers	Sigmoid Colon	Sigmoid Colon
24	chr20:52402000-52403800	Enhancers	Primary hematopoietic stem cells short term culture	blood
25	chr20:52402000-52403800	Enhancers	Stomach Mucosa	stomach
26	chr20:52402000-52403800	Enhancers	GM12878-XiMat	blood
27	chr20:52402000-52404000	Flanking Active TSS	A549	lung
28	chr20:52402000-52404000	Enhancers	HMEC	breast
29	chr20:52402000-52404200	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
30	chr20:52402000-52404400	Enhancers	Duodenum Mucosa	Duodenum
31	chr20:52402000-52407600	Enhancers	Placenta	Placenta
32	chr20:52402200-52402600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
33	chr20:52402200-52402600	Enhancers	Brain Inferior Temporal Lobe	brain
34	chr20:52402200-52403400	Enhancers	Primary monocytes fromperipheralblood	blood
35	chr20:52402200-52403400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
36	chr20:52402200-52403800	Enhancers	HUES48 Cell Line	embryonic stem cell
37	chr20:52402200-52403800	Enhancers	Fetal Lung	lung
38	chr20:52402200-52404000	Enhancers	Primary B cells from cord blood	blood
39	chr20:52402200-52404200	Enhancers	Fetal Intestine Large	intestine
40	chr20:52402200-52405000	Enhancers	Fetal Intestine Small	intestine
41	chr20:52402200-52409400	Weak transcription	Esophagus	oesophagus
42	chr20:52402400-52402600	Enhancers	Fetal Stomach	stomach
43	chr20:52402400-52402800	Flanking Active TSS	Rectal Mucosa Donor 29	rectum
44	chr20:52402400-52403400	Weak transcription	Pancreas	Pancrea
45	chr20:52402400-52403400	Enhancers	Monocytes-CD14+_RO01746	blood
46	chr20:52402400-52403600	Enhancers	Primary neutrophils fromperipheralblood	blood
47	chr20:52402400-52403600	Enhancers	Primary hematopoietic stem cells	blood
48	chr20:52402400-52403800	Enhancers	iPS-20b Cell Line	embryonic stem cell
49	chr20:52402600-52403000	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
50	chr20:52402600-52403000	Enhancers	Breast Myoepithelial Primary Cells	Breast

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