Variant report
Variant | nsv1064105 |
---|---|
Chromosome Location | chr19:56319416-56450532 |
allele | n/a |
Outlinks | Ensembl   UCSC |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr19:56316200-56320800 | Weak transcription | Brain Substantia Nigra | brain |
2 | chr19:56318800-56319800 | Weak transcription | Liver | Liver |
3 | chr19:56319800-56320600 | Enhancers | Liver | Liver |
4 | chr19:56320200-56321000 | ZNF genes & repeats | HUES6 Cell Line | embryonic stem cell |
5 | chr19:56320400-56320600 | Active TSS | H9 Derived Neuron Cultured Cells | ES cell derived |
6 | chr19:56320400-56321000 | ZNF genes & repeats | A549 | lung |
7 | chr19:56320400-56321200 | Enhancers | GM12878-XiMat | blood |
8 | chr19:56320600-56320800 | Active TSS | Adipose Nuclei | Adipose |
9 | chr19:56320600-56320800 | Flanking Active TSS | Hela-S3 | cervix |
10 | chr19:56320600-56321000 | Flanking Active TSS | H9 Derived Neuron Cultured Cells | ES cell derived |
11 | chr19:56320600-56321000 | Flanking Active TSS | Liver | Liver |
12 | chr19:56320600-56321000 | Active TSS | Duodenum Mucosa | Duodenum |
13 | chr19:56320600-56321000 | Enhancers | Pancreas | Pancrea |
14 | chr19:56320600-56321000 | Active TSS | Rectal Mucosa Donor 29 | rectum |
15 | chr19:56320600-56321000 | Enhancers | Rectal Mucosa Donor 31 | rectum |
16 | chr19:56320600-56321000 | Flanking Active TSS | K562 | blood |
17 | chr19:56320600-56321400 | Enhancers | Primary B cells from peripheral blood | blood |
18 | chr19:56320800-56321000 | Flanking Active TSS | Adipose Nuclei | Adipose |
19 | chr19:56320800-56321000 | ZNF genes & repeats | Fetal Intestine Small | intestine |
20 | chr19:56320800-56321000 | Bivalent Enhancer | Sigmoid Colon | Sigmoid Colon |
21 | chr19:56320800-56321200 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
22 | chr19:56320800-56321200 | Bivalent Enhancer | Brain Anterior Caudate | brain |
23 | chr19:56320800-56321200 | Active TSS | Hela-S3 | cervix |
24 | chr19:56320800-56321400 | Active TSS | Brain Substantia Nigra | brain |
25 | chr19:56321000-56321400 | Enhancers | Liver | Liver |
26 | chr19:56321000-56321400 | Enhancers | K562 | blood |
27 | chr19:56321000-56323000 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
28 | chr19:56321200-56321400 | Flanking Active TSS | Hela-S3 | cervix |
29 | chr19:56329400-56330200 | Enhancers | GM12878-XiMat | blood |
30 | chr19:56329600-56334200 | ZNF genes & repeats | HUES6 Cell Line | embryonic stem cell |
31 | chr19:56330200-56331800 | Flanking Active TSS | GM12878-XiMat | blood |
32 | chr19:56330200-56332000 | Enhancers | Primary B cells from peripheral blood | blood |
33 | chr19:56331200-56331800 | Active TSS | Rectal Mucosa Donor 29 | rectum |
34 | chr19:56331800-56332600 | Enhancers | GM12878-XiMat | blood |
35 | chr19:56333400-56334000 | Active TSS | ES-I3 Cell Line | embryonic stem cell |
36 | chr19:56333800-56334200 | Active TSS | iPS DF 19.11 Cell Line | embryonic stem cell |
37 | chr19:56333800-56334200 | Active TSS | Primary T cells fromperipheralblood | blood |
38 | chr19:56342200-56342600 | Active TSS | HSMM | muscle |
39 | chr19:56347600-56348200 | Active TSS | A549 | lung |
40 | chr19:56357800-56358000 | ZNF genes & repeats | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
41 | chr19:56359400-56361200 | ZNF genes & repeats | ES-UCSF4 Cell Line | embryonic stem cell |
42 | chr19:56360400-56361000 | ZNF genes & repeats | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
43 | chr19:56360400-56361400 | ZNF genes & repeats | Monocytes-CD14+_RO01746 | blood |
44 | chr19:56363400-56364600 | ZNF genes & repeats | iPS-20b Cell Line | embryonic stem cell |
45 | chr19:56364600-56372200 | Enhancers | Primary B cells from peripheral blood | blood |
46 | chr19:56365200-56365400 | ZNF genes & repeats | ES-UCSF4 Cell Line | embryonic stem cell |
47 | chr19:56366400-56366800 | Enhancers | GM12878-XiMat | blood |
48 | chr19:56366800-56367000 | Flanking Active TSS | GM12878-XiMat | blood |
49 | chr19:56367000-56367200 | Enhancers | GM12878-XiMat | blood |
50 | chr19:56367200-56367400 | Flanking Active TSS | GM12878-XiMat | blood |