Variant report

Variant nsv1064105
Chromosome Location chr19:56319416-56450532
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:62 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:56316200-56320800 Weak transcription Brain Substantia Nigra brain
2 chr19:56318800-56319800 Weak transcription Liver Liver
3 chr19:56319800-56320600 Enhancers Liver Liver
4 chr19:56320200-56321000 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
5 chr19:56320400-56320600 Active TSS H9 Derived Neuron Cultured Cells ES cell derived
6 chr19:56320400-56321000 ZNF genes & repeats A549 lung
7 chr19:56320400-56321200 Enhancers GM12878-XiMat blood
8 chr19:56320600-56320800 Active TSS Adipose Nuclei Adipose
9 chr19:56320600-56320800 Flanking Active TSS Hela-S3 cervix
10 chr19:56320600-56321000 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
11 chr19:56320600-56321000 Flanking Active TSS Liver Liver
12 chr19:56320600-56321000 Active TSS Duodenum Mucosa Duodenum
13 chr19:56320600-56321000 Enhancers Pancreas Pancrea
14 chr19:56320600-56321000 Active TSS Rectal Mucosa Donor 29 rectum
15 chr19:56320600-56321000 Enhancers Rectal Mucosa Donor 31 rectum
16 chr19:56320600-56321000 Flanking Active TSS K562 blood
17 chr19:56320600-56321400 Enhancers Primary B cells from peripheral blood blood
18 chr19:56320800-56321000 Flanking Active TSS Adipose Nuclei Adipose
19 chr19:56320800-56321000 ZNF genes & repeats Fetal Intestine Small intestine
20 chr19:56320800-56321000 Bivalent Enhancer Sigmoid Colon Sigmoid Colon
21 chr19:56320800-56321200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
22 chr19:56320800-56321200 Bivalent Enhancer Brain Anterior Caudate brain
23 chr19:56320800-56321200 Active TSS Hela-S3 cervix
24 chr19:56320800-56321400 Active TSS Brain Substantia Nigra brain
25 chr19:56321000-56321400 Enhancers Liver Liver
26 chr19:56321000-56321400 Enhancers K562 blood
27 chr19:56321000-56323000 Weak transcription Rectal Mucosa Donor 29 rectum
28 chr19:56321200-56321400 Flanking Active TSS Hela-S3 cervix
29 chr19:56329400-56330200 Enhancers GM12878-XiMat blood
30 chr19:56329600-56334200 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
31 chr19:56330200-56331800 Flanking Active TSS GM12878-XiMat blood
32 chr19:56330200-56332000 Enhancers Primary B cells from peripheral blood blood
33 chr19:56331200-56331800 Active TSS Rectal Mucosa Donor 29 rectum
34 chr19:56331800-56332600 Enhancers GM12878-XiMat blood
35 chr19:56333400-56334000 Active TSS ES-I3 Cell Line embryonic stem cell
36 chr19:56333800-56334200 Active TSS iPS DF 19.11 Cell Line embryonic stem cell
37 chr19:56333800-56334200 Active TSS Primary T cells fromperipheralblood blood
38 chr19:56342200-56342600 Active TSS HSMM muscle
39 chr19:56347600-56348200 Active TSS A549 lung
40 chr19:56357800-56358000 ZNF genes & repeats H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
41 chr19:56359400-56361200 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
42 chr19:56360400-56361000 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
43 chr19:56360400-56361400 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
44 chr19:56363400-56364600 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
45 chr19:56364600-56372200 Enhancers Primary B cells from peripheral blood blood
46 chr19:56365200-56365400 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
47 chr19:56366400-56366800 Enhancers GM12878-XiMat blood
48 chr19:56366800-56367000 Flanking Active TSS GM12878-XiMat blood
49 chr19:56367000-56367200 Enhancers GM12878-XiMat blood
50 chr19:56367200-56367400 Flanking Active TSS GM12878-XiMat blood

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