Variant report

Variant nsv1064193
Chromosome Location chr17:50270352-50320667
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:56 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:50279400-50279800 Enhancers ES-I3 Cell Line embryonic stem cell
2 chr17:50279400-50279800 Enhancers Psoas Muscle Psoas
3 chr17:50279600-50280000 Enhancers Fetal Brain Male brain
4 chr17:50288800-50289000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
5 chr17:50289000-50291400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
6 chr17:50291400-50292200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
7 chr17:50295800-50296000 Enhancers iPS-15b Cell Line embryonic stem cell
8 chr17:50295800-50296200 Enhancers iPS-20b Cell Line embryonic stem cell
9 chr17:50296600-50296800 Enhancers iPS-15b Cell Line embryonic stem cell
10 chr17:50297000-50297400 Enhancers Skeletal Muscle Female skeletal muscle
11 chr17:50298400-50299200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
12 chr17:50299200-50300200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
13 chr17:50300200-50302200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
14 chr17:50300600-50300800 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr17:50300800-50301800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
16 chr17:50301800-50302200 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr17:50302200-50305400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
18 chr17:50302800-50303000 Enhancers Brain Hippocampus Middle brain
19 chr17:50304600-50304800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
20 chr17:50304600-50306600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
21 chr17:50304600-50306600 Enhancers HMEC breast
22 chr17:50304800-50305200 Enhancers Brain Hippocampus Middle brain
23 chr17:50304800-50305400 Enhancers Brain Inferior Temporal Lobe brain
24 chr17:50304800-50306600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
25 chr17:50304800-50306800 Enhancers Brain Substantia Nigra brain
26 chr17:50305000-50306400 Enhancers NHEK skin
27 chr17:50305200-50305600 Flanking Active TSS Brain Hippocampus Middle brain
28 chr17:50305400-50305600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
29 chr17:50305400-50305800 Flanking Active TSS Brain Inferior Temporal Lobe brain
30 chr17:50305400-50306600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
31 chr17:50305600-50306800 Enhancers Brain Hippocampus Middle brain
32 chr17:50305800-50306800 Enhancers Brain Inferior Temporal Lobe brain
33 chr17:50306200-50306400 Enhancers Brain Angular Gyrus brain
34 chr17:50306200-50306600 Enhancers Brain Cingulate Gyrus brain
35 chr17:50306400-50309400 Weak transcription NHEK skin
36 chr17:50306600-50308800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
37 chr17:50306600-50308800 Weak transcription HMEC breast
38 chr17:50306600-50309800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
39 chr17:50308800-50309000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
40 chr17:50308800-50313600 Enhancers HMEC breast
41 chr17:50309000-50309600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
42 chr17:50309400-50311400 Enhancers Breast Myoepithelial Primary Cells Breast
43 chr17:50309400-50311600 Enhancers NHEK skin
44 chr17:50309600-50310000 Enhancers NH-A brain
45 chr17:50309600-50311800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
46 chr17:50309800-50311600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
47 chr17:50310200-50311200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
48 chr17:50310800-50311800 Enhancers Liver Liver
49 chr17:50311200-50312200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
50 chr17:50311600-50312000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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