Variant report
Variant | nsv1064999 |
---|---|
Chromosome Location | chr19:43315599-43811811 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:6620)
- CpG islands (count:3361)
- Chromatin interactive region (count:11)
- LncRNA region (count:79)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No. | Transcrition factor | Chromosome Location | Cell Line | Cell type | Cell Stage | Matched TF binding sites |
---|---|---|---|---|---|---|
1 | ATF1 | chr19:43779068-43779071 | K562 | blood: | n/a | n/a |
2 | ATF1 | chr19:43733581-43733686 | K562 | blood: | n/a | n/a |
3 | ATF3 | chr19:43335349-43336094 | A549 | lung: | n/a | n/a |
4 | ATF3 | chr19:43335307-43336092 | A549 | lung: | n/a | n/a |
5 | ATF3 | chr19:43355412-43355889 | A549 | lung: | n/a | n/a |
6 | ATF3 | chr19:43336336-43336928 | A549 | lung: | n/a | n/a |
7 | ATF3 | chr19:43355048-43355947 | A549 | lung: | n/a | n/a |
8 | ATF3 | chr19:43336349-43336838 | A549 | lung: | n/a | n/a |
9 | ATF3 | chr19:43686016-43686763 | A549 | lung: | n/a | n/a |
10 | BATF | chr19:43588401-43588710 | GM12878 | blood: | n/a | n/a |
11 | BATF | chr19:43711409-43711658 | GM12878 | blood: | n/a | n/a |
12 | BATF | chr19:43442962-43443231 | GM12878 | blood: | n/a | n/a |
13 | BATF | chr19:43798559-43798850 | GM12878 | blood: | n/a | chr19:43798663-43798674 |
14 | BATF | chr19:43552261-43552460 | GM12878 | blood: | n/a | chr19:43552319-43552330 |
15 | BATF | chr19:43591924-43592150 | GM12878 | blood: | n/a | n/a |
16 | BATF | chr19:43361555-43361754 | GM12878 | blood: | n/a | n/a |
17 | BATF | chr19:43552186-43552537 | GM12878 | blood: | n/a | chr19:43552319-43552330 |
18 | BATF | chr19:43692397-43692675 | GM12878 | blood: | n/a | n/a |
19 | BATF | chr19:43692257-43692526 | GM12878 | blood: | n/a | n/a |
20 | BATF | chr19:43775309-43775522 | GM12878 | blood: | n/a | n/a |
21 | BATF | chr19:43738081-43738296 | GM12878 | blood: | n/a | chr19:43738185-43738196 |
22 | BATF | chr19:43613006-43613315 | GM12878 | blood: | n/a | chr19:43613110-43613121 |
23 | BCL3 | chr19:43336972-43337663 | A549 | lung: | n/a | n/a |
24 | BCL3 | chr19:43402518-43403428 | A549 | lung: | n/a | n/a |
25 | BCL3 | chr19:43336292-43336877 | A549 | lung: | n/a | n/a |
26 | BCL3 | chr19:43335292-43335990 | A549 | lung: | n/a | chr19:43335602-43335611 chr19:43335603-43335612 |
27 | BCL3 | chr19:43354910-43356058 | A549 | lung: | n/a | n/a |
28 | BCL3 | chr19:43323095-43323355 | GM12878 | blood: | n/a | n/a |
29 | BCL3 | chr19:43354946-43356043 | A549 | lung: | n/a | n/a |
30 | BCL3 | chr19:43335242-43336126 | A549 | lung: | n/a | chr19:43335602-43335611 chr19:43335603-43335612 |
31 | BCL3 | chr19:43336159-43337656 | A549 | lung: | n/a | chr19:43336227-43336234 |
32 | BHLHE40 | chr19:43427453-43427512 | GM12878 | blood: | n/a | n/a |
33 | BHLHE40 | chr19:43709323-43709343 | K562 | blood: | n/a | n/a |
34 | BHLHE40 | chr19:43385480-43385517 | K562 | blood: | n/a | n/a |
35 | BHLHE40 | chr19:43355572-43355890 | A549 | lung: | n/a | n/a |
36 | BHLHE40 | chr19:43582147-43582203 | K562 | blood: | n/a | n/a |
37 | BHLHE40 | chr19:43809984-43810194 | K562 | blood: | n/a | chr19:43810115-43810131 |
38 | BHLHE40 | chr19:43733601-43733620 | K562 | blood: | n/a | n/a |
39 | BRCA1 | chr19:43355288-43355847 | Hela-S3 | cervix: | n/a | n/a |
40 | BRCA1 | chr19:43624776-43624937 | Hela-S3 | cervix: | n/a | n/a |
41 | BRCA1 | chr19:43769426-43769782 | Hela-S3 | cervix: | n/a | n/a |
42 | BRCA1 | chr19:43436723-43436914 | Hela-S3 | cervix: | n/a | n/a |
43 | BRCA1 | chr19:43809902-43809911 | HepG2 | liver: | n/a | n/a |
44 | BRCA1 | chr19:43525934-43526309 | Hela-S3 | cervix: | n/a | n/a |
45 | CBX3 | chr19:43775261-43775711 | HCT-116 | colon: | n/a | n/a |
46 | CBX3 | chr19:43775276-43775644 | K562 | blood: | n/a | n/a |
47 | CBX3 | chr19:43385505-43385738 | K562 | blood: | n/a | n/a |
48 | CBX3 | chr19:43385431-43385838 | K562 | blood: | n/a | n/a |
49 | CEBPB | chr19:43496426-43496699 | A549 | lung: | n/a | n/a |
50 | CEBPB | chr19:43560474-43560633 | A549 | lung: | n/a | chr19:43560568-43560581 chr19:43560568-43560579 chr19:43560568-43560581 |
No. | Chromosome Location | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr19:43421584-43421634 | ProgFib | skin: | n/a |
2 | chr19:43769725-43769775 | GM06990 | blood: | n/a |
3 | chr19:43423115-43423165 | GM12892 | blood: | n/a |
4 | chr19:43441294-43441344 | HepG2 | liver: | n/a |
5 | chr19:43423176-43423226 | HCM | heart: | n/a |
6 | chr19:43588055-43588105 | HepG2 | liver: | n/a |
7 | chr19:43421584-43421634 | ProgFib | skin: | n/a |
8 | chr19:43769725-43769775 | GM06990 | blood: | n/a |
9 | chr19:43423115-43423165 | GM12892 | blood: | n/a |
10 | chr19:43441294-43441344 | HepG2 | liver: | n/a |
11 | chr19:43423176-43423226 | HCM | heart: | n/a |
12 | chr19:43588055-43588105 | HepG2 | liver: | n/a |
13 | chr19:43709754-43709804 | SKMC | muscle: | n/a |
14 | chr19:43423265-43423315 | HRCEpiC | kidney: | n/a |
15 | chr19:43711249-43711299 | Caco-2 | colon: | n/a |
16 | chr19:43531821-43531871 | HIPEpiC | eye: | n/a |
17 | chr19:43383405-43383455 | HCPEpiC | choroid plexus: | n/a |
18 | chr19:43423265-43423315 | SKMC | muscle: | n/a |
19 | chr19:43361218-43361268 | CMK | blood: | n/a |
20 | chr19:43680072-43680122 | A549 | lung: | n/a |
21 | chr19:43691878-43691928 | HRCEpiC | kidney: | n/a |
22 | chr19:43383405-43383455 | HCT-116 | colon: | n/a |
23 | chr19:43361218-43361268 | HRPEpiC | eye: | n/a |
24 | chr19:43588055-43588105 | GM12892 | blood: | n/a |
25 | chr19:43580600-43580650 | Jurkat | blood: | n/a |
26 | chr19:43441294-43441344 | AG10803 | skin: | n/a |
27 | chr19:43774982-43775032 | NH-A | brain: | n/a |
28 | chr19:43423115-43423165 | SAEC | small airway: | n/a |
29 | chr19:43514144-43514194 | HRCEpiC | kidney: | n/a |
30 | chr19:43697480-43697530 | HIPEpiC | eye: | n/a |
31 | chr19:43360229-43360279 | SK-N-MC | brain: | n/a |
32 | chr19:43709654-43709704 | RPTEC | kidney: | n/a |
33 | chr19:43691878-43691928 | AG10803 | skin: | n/a |
34 | chr19:43587500-43587550 | SKMC | muscle: | n/a |
35 | chr19:43441294-43441344 | NHDF-neo | bronchial: | n/a |
36 | chr19:43442804-43442854 | GM12892 | blood: | n/a |
37 | chr19:43588025-43588075 | IMR90 | lung: | fetal |
38 | chr19:43530623-43530673 | K562 | blood: | n/a |
39 | chr19:43361218-43361268 | MCF-7 | breast: | n/a |
40 | chr19:43423119-43423169 | ovcar-3 | ovarian: | n/a |
41 | chr19:43360755-43360805 | PrEC | prostate: | n/a |
42 | chr19:43709654-43709704 | K562 | blood: | n/a |
43 | chr19:43423115-43423165 | U87 | brain: | n/a |
44 | chr19:43514144-43514194 | LNCaP | prostate: | n/a |
45 | chr19:43588069-43588119 | HCF | heart: | n/a |
46 | chr19:43514144-43514194 | Hela-S3 | cervix: | n/a |
47 | chr19:43690996-43691046 | ovcar-3 | ovarian: | n/a |
48 | chr19:43442484-43442534 | HepG2 | liver: | n/a |
49 | chr19:43441294-43441344 | BJ | skin: | n/a |
50 | chr19:43442484-43442534 | PFSK-1 | brain: | n/a |
(count:11 , 50 per page) page:
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No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr19:43801843..43804269-chr19:43806143..43807885,2 | MCF-7 | breast: | |
2 | chr19:43809493..43810365-chr19:43820777..43821441,3 | MCF-7 | breast: | |
3 | chr19:43523469..43524084-chr19:43531918..43532440,2 | MCF-7 | breast: | |
4 | chr19:43608137..43608719-chr19:43820621..43821519,2 | MCF-7 | breast: | |
5 | chr19:43809519..43810435-chr19:43820572..43821543,3 | K562 | blood: | |
6 | chr19:43523469..43524084-chr19:43531918..43532440,2 | MCF-7 | breast: | |
7 | chr19:43678340..43681333-chr19:43698109..43700078,2 | MCF-7 | breast: | |
8 | chr19:43801843..43804269-chr19:43806143..43807885,2 | MCF-7 | breast: | |
9 | chr19:43531581..43532101-chr2:1136088..1136613,2 | MCF-7 | breast: | |
10 | chr19:43809862..43810443-chr19:43929397..43930009,2 | MCF-7 | breast: | |
11 | chr19:43265768..43266290-chr19:43769932..43770473,2 | MCF-7 | breast: |
No. | lncRNA name | Chromosome Location | lncRNA alias |
---|---|---|---|
1 | lnc-PSG9-2 | chr19:43727043-43727110 | NONHSAT066591 |
2 | lnc-PSG1-1 | chr19:43348511-43348765 | NONHSAT066571 |
3 | lnc-PSG2-2 | chr19:43587104-43587197 | NONHSAT066580 |
4 | lnc-PSG6-1 | chr19:43440309-43440647 | NONHSAT066574 |
5 | lnc-PSG6-2 | chr19:43454299-43454539 | NONHSAT066575 |
6 | lnc-PSG1-1 | chr19:43343708-43343916 | NONHSAT066571 |
7 | lnc-PSG11-1 | chr19:43545168-43545400 | NONHSAT066579 |
8 | lnc-PSG9-2 | chr19:43724783-43725023 | NONHSAT066593 |
9 | lnc-PSG6-1 | chr19:43429925-43430179 | NR_073194 |
10 | lnc-PSG1-1 | chr19:43341149-43341602 | NONHSAT066570 |
11 | lnc-PSG9-2 | chr19:43724140-43724394 | NONHSAT066591 |
12 | lnc-PSG1-1 | chr19:43358101-43358466 | NONHSAT066571 |
13 | lnc-PSG9-2 | chr19:43762354-43762608 | NONHSAT066592 |
14 | lnc-PSG1-1 | chr19:43349168-43349446 | NONHSAT066571 |
15 | lnc-PSG1-1 | chr19:43358101-43358466 | NONHSAT146988 |
16 | lnc-PSG6-1 | chr19:43428284-43428976 | NR_073194 |
17 | lnc-PSG1-1 | chr19:43349168-43349446 | NONHSAT146988 |
18 | lnc-PSG4-2 | chr19:43688934-43689087 | NONHSAT066587 |
19 | lnc-PSG2-3 | chr19:43600608-43600855 | NONHSAT066582 |
20 | lnc-PSG6-1 | chr19:43430590-43430868 | NR_073194 |
21 | lnc-PSG2-1 | chr19:43586658-43586820 | NONHSAT066581 |
22 | lnc-PSG11-1 | chr19:43544526-43544780 | NONHSAT066579 |
23 | lnc-PSG6-1 | chr19:43439556-43439921 | NR_073194 |
24 | lnc-PSG4-2 | chr19:43684499-43684748 | NONHSAT066587 |
25 | lnc-PSG5-1 | chr19:43698492-43699038 | NONHSAT066588 |
26 | lnc-PSG2-5 | chr19:43514422-43514579 | NONHSAT066577 |
27 | lnc-PSG6-1 | chr19:43429925-43431729 | NONHSAT066573 |
28 | lnc-PSG1-1 | chr19:43343708-43343916 | NONHSAT146988 |
29 | lnc-PSG9-2 | chr19:43715943-43716627 | NONHSAT066592 |
30 | lnc-PSG2-1 | chr19:43585939-43586423 | NONHSAT066581 |
31 | lnc-PSG9-2 | chr19:43728324-43728464 | NONHSAT066591 |
32 | lnc-PSG9-2 | chr19:43715943-43716627 | NONHSAT066591 |
33 | lnc-PSG6-1 | chr19:43433594-43433872 | NR_073194 |
34 | lnc-PSG6-1 | chr19:43441165-43441330 | NR_073194 |
35 | lnc-PSG9-2 | chr19:43719405-43719531 | NONHSAT066591 |
36 | lnc-CD177-1 | chr19:43659324-43659477 | ENSG00000227606.1 |
37 | lnc-PSG5-1 | chr19:43699147-43699301 | NONHSAT066589 |
38 | lnc-PSG5-1 | chr19:43698107-43698746 | NONHSAT066589 |
39 | lnc-PSG4-1 | chr19:43707241-43708403 | NONHSAT066590 |
40 | lnc-PSG2-5 | chr19:43519268-43519426 | NONHSAT066577 |
41 | lnc-PSG9-2 | chr19:43734076-43734177 | NONHSAT066591 |
42 | lnc-CD177-1 | chr19:43657431-43657763 | ENSG00000227606.1 |
43 | lnc-PSG1-1 | chr19:43348511-43348765 | NONHSAT146988 |
44 | lnc-CD177-1 | chr19:43665002-43665014 | ENSG00000227606.1 |
45 | lnc-PSG9-1 | chr19:43807323-43807688 | NONHSAT066594 |
46 | lnc-PSG1-1 | chr19:43570669-43570753 | NONHSAT066570 |
47 | lnc-PSG2-3 | chr19:43601248-43601512 | NONHSAT066582 |
48 | lnc-CD177-1 | chr19:43657665-43657763 | ENSG00000227606.1 |
49 | lnc-PSG2-5 | chr19:43514110-43514858 | NONHSAT066576 |
50 | lnc-PSG9-1 | chr19:43808621-43808675 | NONHSAT066594 |
No data |
No data |
Variant related genes | Relation type |
---|---|
CEACAMP7 | TF binding region |
CEACAMP9 | TF binding region |
PSG8 | TF binding region |
PSG5 | TF binding region |
CEACAMP4 | TF binding region |
PSG11 | TF binding region |
ENSG00000225877 | TF binding region |
PSG6 | TF binding region |
CEACAMP10 | TF binding region |
PSG9 | TF binding region |
PSG4 | TF binding region |
CEACAMP8 | TF binding region |
PSG1 | TF binding region |
CEACAMP11 | TF binding region |
PSG2 | TF binding region |
ENSG00000227606 | TF binding region |
PSG7 | TF binding region |
PSG10P | TF binding region |
CEACAMP7 | CpG island |
CEACAMP9 | CpG island |
PSG8 | CpG island |
PSG5 | CpG island |
CEACAMP4 | CpG island |
PSG11 | CpG island |
ENSG00000225877 | CpG island |
PSG6 | CpG island |
CEACAMP10 | CpG island |
PSG9 | CpG island |
PSG4 | CpG island |
CEACAMP8 | CpG island |
PSG1 | CpG island |
CEACAMP11 | CpG island |
PSG2 | CpG island |
ENSG00000227606 | CpG island |
PSG7 | CpG island |
PSG10P | CpG island |
ENSG00000243137 | chromatin interactions |
No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs527316547 | chr19:43317004-43317005 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
2 | rs145709394 | chr19:43317007-43317008 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
3 | rs372010321 | chr19:43317008-43317009 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
4 | rs567414226 | chr19:43317014-43317015 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
5 | rs367871123 | chr19:43317018-43317019 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
6 | rs200246183 | chr19:43317024-43317025 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
7 | rs547560781 | chr19:43317032-43317033 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
8 | rs114303407 | chr19:43317034-43317035 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
9 | rs532819422 | chr19:43317035-43317036 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
10 | rs538584739 | chr19:43317037-43317038 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
11 | rs181989666 | chr19:43317040-43317041 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
12 | rs187281062 | chr19:43317043-43317044 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
13 | rs540985478 | chr19:43317056-43317057 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
14 | rs554645884 | chr19:43317067-43317068 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
15 | rs574637776 | chr19:43317078-43317079 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
16 | rs543887475 | chr19:43317079-43317080 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
17 | rs191751705 | chr19:43317096-43317097 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
18 | rs560045867 | chr19:43317099-43317100 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
19 | rs527308972 | chr19:43317103-43317104 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
20 | rs546197769 | chr19:43317105-43317106 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
21 | rs560050602 | chr19:43317118-43317119 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
22 | rs182012773 | chr19:43317122-43317123 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
23 | rs186549763 | chr19:43317127-43317128 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
24 | rs149551911 | chr19:43317136-43317137 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
25 | rs191514914 | chr19:43317152-43317153 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
26 | rs144160215 | chr19:43317153-43317154 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
27 | rs371464042 | chr19:43317165-43317166 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
28 | rs569773176 | chr19:43317167-43317168 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
29 | rs568570956 | chr19:43317171-43317172 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
30 | rs182557598 | chr19:43317180-43317181 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
31 | rs565590628 | chr19:43317198-43317199 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
32 | rs534599590 | chr19:43317205-43317206 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
33 | rs535898415 | chr19:43317208-43317209 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
34 | rs186934360 | chr19:43317210-43317211 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
35 | rs543578225 | chr19:43317215-43317216 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
36 | rs114152177 | chr19:43317221-43317222 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
37 | rs577379164 | chr19:43317228-43317229 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
38 | rs144494294 | chr19:43317229-43317230 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
39 | rs539437655 | chr19:43317234-43317235 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
40 | rs371795263 | chr19:43317244-43317245 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
41 | rs147414281 | chr19:43317253-43317254 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
42 | rs139655637 | chr19:43317256-43317257 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
43 | rs560897360 | chr19:43317269-43317270 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
44 | rs10401982 | chr19:43317280-43317281 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
45 | rs145182942 | chr19:43317286-43317287 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
46 | rs375914373 | chr19:43317302-43317303 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
47 | rs532209789 | chr19:43317312-43317313 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
48 | rs189770404 | chr19:43317320-43317321 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
49 | rs183549354 | chr19:43317326-43317327 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
50 | rs534633727 | chr19:43317332-43317333 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
Disease | PMID | Source |
---|---|---|
Myelodysplastic syndrome | 17634407 | CNVD |
Acute lymphoblastic leukemia | 22237106 | CNVD |
Chordoma | 21602918 | CNVD |
Ewing''s sarcoma | 21437220 | CNVD |
Glioblastoma multiforme | 21080181 | CNVD |
Chronic lymphocytic leukemia | 21546498 | CNVD |
Cancer | 21637783 | CNVD |
Retinoblastoma | 21504564 | CNVD |
Medulloblastoma | 21979893 | CNVD |
Ovarian cancer | 21720365 | CNVD |
Cancer | 20164919 | CNVD |
Thoracic aortic aneurysm | 21092924 | CNVD |
T-cell prolymphocytic leukemia | 19278963 | CNVD |
Prostate cancer | 18632612 | CNVD |
Autism | 22495311 | CNVD |
Adenoid cystic carcinoma | 18698036 | CNVD |
Ductal carcinoma | 22052326 | CNVD |
Congenital nephrotic syndrome | 18421352 | CNVD |
Astrocytoma | 17934521 | CNVD |
Leukemia | 17361228 | CNVD |
Adenoid cystic carcinoma | 17372589 | CNVD |
Breast cancer | 21858162 | CNVD |
Breast cancer | 17603634 | CNVD |
Glioma | 21971842 | CNVD |
Esophageal squamous carcinoma | 21637470 | CNVD |
Endometrial cancer | 22040021 | CNVD |
Astrocytoma | 17387387 | CNVD |
Breast cancer | 21264507 | CNVD |
Oligodendroglial tumors | 17285580 | CNVD |
renal disease | 20603712 | CNVD |
Salivary gland adenoid cystic carcinoma | 17545515 | CNVD |
Breast cancer | 16608533 | CNVD |
Neuroblastoma | 18923191 | CNVD |
Breast cancer | 21364760 | CNVD |
Invasive pancreatic ductal carcinoma | 18765526 | CNVD |
Rhabdomyosarcoma | 16790082 | CNVD |
Chordoma | 18071362 | CNVD |
Urothelial carcinoma | 21177765 | CNVD |
small cell lung cancer | 20016488 | CNVD |
Wilms tumour | 21544195 | CNVD |
Acute lymphoblastic leukemia | 20067559 | CNVD |
Ovarian neoplasms | 16753589 | CNVD |
Malignant fibrous histiocytomas | 21085701 | CNVD |
Metanephric adenoma | 20802469 | CNVD |
Acute myeloid leukemia | 16864856 | CNVD |
Bladder cancer | 21909424 | CNVD |
Medulloblastoma | 16783165 | CNVD |
Gastric cancer | 18160780 | CNVD |
Hepatocellular carcinoma | 16750200 | CNVD |
Basal cell lymphoma | 19029149 | CNVD |
Breast cancer | 20409316 | CNVD |
Diffuse large b-cell lymphoma | 19029149 | CNVD |
Multiple myeloma | 16616336 | CNVD |
Renal cell carcinoma | 18765545 | CNVD |
Acute myeloid leukemia | 20729466 | CNVD |
Lung cancer | 18438408 | CNVD |
Ovarian clear cell carcinoma | 19293255 | CNVD |
Astrocytoma | 22246337 | CNVD |
Ovarian cancer | 22174824 | CNVD |
Multiple myeloma | 17550852 | CNVD |
Breast cancer | 22522925 | CNVD |
Breast cancer | 21509527 | CNVD |
Cancer | 20164920 | CNVD |
Pancreatic cancer | 17952125 | CNVD |
Ependymoma | 20639864 | CNVD |
Autism | 19492091 | CNVD |
Ovarian cancer | 20800559 | CNVD |
Myelofibrosis | 22110671 | CNVD |
Breast cancer | 16272173 | CNVD |
Spondylocostal dysostosis | 21085971 | CNVD |
Nicotine metabolism | 21956041 | CNVD |
Primary central nervous system lymphoma | 21088137 | CNVD |
Glioblastoma multiforme | 17002787 | CNVD |
Ovarian cancer | 20844748 | CNVD |
Breast cancer | 17133270 | CNVD |
Colorectal cancer | 20459617 | CNVD |
Lung adenocarcinoma | 21935476 | CNVD |
Breast cancer | 20668451 | CNVD |
Cancer | 20668451 | CNVD |
Lung cancer | 20668451 | CNVD |
Ovarian cancer | 20668451 | CNVD |
Pancreas cancer | 20668451 | CNVD |
Prostate cancer | 20668451 | CNVD |
Melanoma | 20877625 | CNVD |
Ovarian cancer | 21240255 | CNVD |
early-passage human iPS cells | 21368824 | CNVD |
Primary Severe Spermatogenic Failure | 20378930 | CNVD |
Non-syndromic sensorineural hearing loss | 18451855 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr19:43317000-43317600 | Enhancers | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
2 | chr19:43317400-43317600 | Enhancers | Foreskin Fibroblast Primary Cells skin02 | Skin |
3 | chr19:43317600-43321400 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
4 | chr19:43320600-43321200 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
5 | chr19:43321000-43321400 | Enhancers | ES-I3 Cell Line | embryonic stem cell |
6 | chr19:43321000-43321400 | Enhancers | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
7 | chr19:43321000-43321400 | Enhancers | IMR90 fetal lung fibroblasts Cell Line | lung |
8 | chr19:43321000-43321400 | Enhancers | iPS-18 Cell Line | embryonic stem cell |
9 | chr19:43321000-43321400 | Enhancers | iPS-20b Cell Line | embryonic stem cell |
10 | chr19:43321000-43321400 | Enhancers | ES-UCSF4 Cell Line | embryonic stem cell |
11 | chr19:43321000-43321400 | Enhancers | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
12 | chr19:43321000-43321400 | Enhancers | Muscle Satellite Cultured Cells | -- |
13 | chr19:43321000-43321400 | Enhancers | Cortex derived primary cultured neurospheres | brain |
14 | chr19:43321000-43321400 | Enhancers | Foreskin Fibroblast Primary Cells skin01 | Skin |
15 | chr19:43321000-43321400 | Enhancers | Foreskin Keratinocyte Primary Cells skin02 | Skin |
16 | chr19:43321000-43321400 | Enhancers | HSMM | muscle |
17 | chr19:43321000-43321800 | Enhancers | A549 | lung |
18 | chr19:43321000-43321800 | Enhancers | HMEC | breast |
19 | chr19:43321000-43321800 | Enhancers | NHDF-Ad | bronchial |
20 | chr19:43321200-43321400 | Enhancers | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
21 | chr19:43321200-43321400 | Enhancers | Foreskin Fibroblast Primary Cells skin02 | Skin |
22 | chr19:43321200-43321400 | Enhancers | Foreskin Keratinocyte Primary Cells skin03 | Skin |
23 | chr19:43321200-43321400 | Enhancers | NH-A | brain |
24 | chr19:43321200-43321400 | Enhancers | NHEK | skin |
25 | chr19:43321200-43321400 | Enhancers | NHLF | lung |
26 | chr19:43321400-43321800 | Enhancers | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
27 | chr19:43321400-43322800 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
28 | chr19:43321400-43323000 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
29 | chr19:43321400-43323000 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
30 | chr19:43321400-43323000 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
31 | chr19:43321400-43323000 | Weak transcription | NHEK | skin |
32 | chr19:43321400-43323600 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
33 | chr19:43321400-43323600 | Weak transcription | Muscle Satellite Cultured Cells | -- |
34 | chr19:43321400-43324000 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
35 | chr19:43321400-43324200 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
36 | chr19:43321400-43324800 | Weak transcription | HSMM | muscle |
37 | chr19:43321400-43337400 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
38 | chr19:43321600-43323200 | Weak transcription | NHLF | lung |
39 | chr19:43321800-43323000 | Weak transcription | HMEC | breast |
40 | chr19:43321800-43323000 | Weak transcription | NHDF-Ad | bronchial |
41 | chr19:43321800-43323400 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
42 | chr19:43321800-43323800 | Weak transcription | NH-A | brain |
43 | chr19:43321800-43324000 | Weak transcription | Osteobl | bone |
44 | chr19:43322800-43324200 | Enhancers | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
45 | chr19:43323000-43323400 | Genic enhancers | NHEK | skin |
46 | chr19:43323000-43324400 | Enhancers | HMEC | breast |
47 | chr19:43323000-43325200 | Enhancers | Breast Myoepithelial Primary Cells | Breast |
48 | chr19:43323000-43325200 | Enhancers | Foreskin Keratinocyte Primary Cells skin03 | Skin |
49 | chr19:43323000-43325400 | Enhancers | Foreskin Keratinocyte Primary Cells skin02 | Skin |
50 | chr19:43323000-43326000 | Enhancers | Foreskin Fibroblast Primary Cells skin01 | Skin |