Variant report

Variant	nsv1065199
Chromosome Location	chr19:52142340-52165439
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr19:52164382-52164598	K562	blood:	n/a	n/a
2	ARID3A	chr19:52160074-52160493	K562	blood:	n/a	n/a
3	ATF1	chr19:52154746-52155090	K562	blood:	n/a	n/a
4	ATF2	chr19:52154376-52154835	GM12878	blood:	n/a	n/a
5	BATF	chr19:52149947-52150214	GM12878	blood:	n/a	n/a
6	BCL11A	chr19:52149937-52150305	GM12878	blood:	n/a	n/a
7	BHLHE40	chr19:52150088-52150405	K562	blood:	n/a	chr19:52150169-52150178 chr19:52150169-52150178
8	BHLHE40	chr19:52154406-52154749	GM12878	blood:	n/a	n/a
9	BHLHE40	chr19:52147812-52147863	K562	blood:	n/a	n/a
10	BHLHE40	chr19:52160071-52160612	K562	blood:	n/a	n/a
11	BHLHE40	chr19:52150049-52150408	GM12878	blood:	n/a	chr19:52150169-52150178 chr19:52150169-52150178
12	CBX3	chr19:52157930-52158454	K562	blood:	n/a	n/a
13	CBX3	chr19:52159942-52160552	K562	blood:	n/a	n/a
14	CBX3	chr19:52157924-52158374	K562	blood:	n/a	n/a
15	CBX3	chr19:52160019-52160455	K562	blood:	n/a	n/a
16	CEBPB	chr19:52160197-52160526	K562	blood:	n/a	n/a
17	CEBPB	chr19:52144962-52145257	HepG2	liver:	n/a	chr19:52145111-52145122
18	CEBPB	chr19:52144983-52145193	IMR90	lung:	n/a	chr19:52145111-52145122
19	CEBPB	chr19:52145000-52145199	K562	blood:	n/a	chr19:52145111-52145122
20	CEBPB	chr19:52144942-52145259	A549	lung:	n/a	chr19:52145111-52145122
21	CTCF	chr19:52164306-52164554	GM12878	blood:	n/a	chr19:52164418-52164436 chr19:52164420-52164433 chr19:52164419-52164435 chr19:52164413-52164434 chr19:52164424-52164433
22	CTCF	chr19:52160300-52160450	SAEC	small airway:	n/a	chr19:52160373-52160394 chr19:52160384-52160393 chr19:52160378-52160396 chr19:52160380-52160393
23	CTCF	chr19:52158266-52158295	Medullo	brain:	n/a	n/a
24	CTCF	chr19:52158160-52158385	K562	blood:	n/a	n/a
25	CTCF	chr19:52160161-52160656	GM12878	blood:	n/a	chr19:52160373-52160394 chr19:52160384-52160393 chr19:52160378-52160396 chr19:52160380-52160393
26	CTCF	chr19:52164177-52164585	A549	lung:	n/a	chr19:52164418-52164436 chr19:52164420-52164433 chr19:52164419-52164435 chr19:52164413-52164434 chr19:52164424-52164433
27	CTCF	chr19:52164303-52164551	Pancreas_OC	pancreas:	n/a	chr19:52164418-52164436 chr19:52164420-52164433 chr19:52164419-52164435 chr19:52164413-52164434 chr19:52164424-52164433
28	CTCF	chr19:52160228-52160536	GM12878	blood:	n/a	chr19:52160373-52160394 chr19:52160384-52160393 chr19:52160378-52160396 chr19:52160380-52160393
29	CTCF	chr19:52160300-52160450	GM12801	blood:	n/a	chr19:52160373-52160394 chr19:52160384-52160393 chr19:52160378-52160396 chr19:52160380-52160393
30	CTCF	chr19:52160298-52160486	Hela-S3	cervix:	n/a	chr19:52160373-52160394 chr19:52160384-52160393 chr19:52160378-52160396 chr19:52160380-52160393
31	CTCF	chr19:52160300-52160450	BJ	skin:	n/a	chr19:52160373-52160394 chr19:52160384-52160393 chr19:52160378-52160396 chr19:52160380-52160393
32	CTCF	chr19:52164360-52164510	GM12870	blood:	n/a	chr19:52164418-52164436 chr19:52164420-52164433 chr19:52164419-52164435 chr19:52164413-52164434 chr19:52164424-52164433
33	CTCF	chr19:52164340-52164490	K562	blood:	n/a	chr19:52164418-52164436 chr19:52164420-52164433 chr19:52164419-52164435 chr19:52164413-52164434 chr19:52164424-52164433
34	CTCF	chr19:52164360-52164510	HPF	lung:	n/a	chr19:52164418-52164436 chr19:52164420-52164433 chr19:52164419-52164435 chr19:52164413-52164434 chr19:52164424-52164433
35	CTCF	chr19:52160320-52160470	HPAF	blood vessel:	n/a	chr19:52160373-52160394 chr19:52160384-52160393 chr19:52160378-52160396 chr19:52160380-52160393
36	CTCF	chr19:52164154-52164799	HCT-116	colon:	n/a	chr19:52164418-52164436 chr19:52164420-52164433 chr19:52164419-52164435 chr19:52164413-52164434 chr19:52164424-52164433
37	CTCF	chr19:52160320-52160470	HPF	lung:	n/a	chr19:52160373-52160394 chr19:52160384-52160393 chr19:52160378-52160396 chr19:52160380-52160393
38	CTCF	chr19:52164320-52164470	HVMF	connective:	n/a	chr19:52164418-52164436 chr19:52164420-52164433 chr19:52164419-52164435 chr19:52164413-52164434 chr19:52164424-52164433
39	CTCF	chr19:52160320-52160470	HUVEC	blood vessel:	n/a	chr19:52160373-52160394 chr19:52160384-52160393 chr19:52160378-52160396 chr19:52160380-52160393
40	CTCF	chr19:52164309-52164527	T-47D	breast:	n/a	chr19:52164418-52164436 chr19:52164420-52164433 chr19:52164419-52164435 chr19:52164413-52164434 chr19:52164424-52164433
41	CTCF	chr19:52164360-52164510	GM12871	blood:	n/a	chr19:52164418-52164436 chr19:52164420-52164433 chr19:52164419-52164435 chr19:52164413-52164434 chr19:52164424-52164433
42	CTCF	chr19:52160280-52160430	HFF-Myc	foreskin:	n/a	chr19:52160373-52160394 chr19:52160384-52160393 chr19:52160378-52160396 chr19:52160380-52160393
43	CTCF	chr19:52164320-52164470	GM12870	blood:	n/a	chr19:52164418-52164436 chr19:52164420-52164433 chr19:52164419-52164435 chr19:52164413-52164434 chr19:52164424-52164433
44	CTCF	chr19:52158200-52158350	GM12864	blood:	n/a	n/a
45	CTCF	chr19:52160266-52160539	Pancreas_OC	pancreas:	n/a	chr19:52160373-52160394 chr19:52160384-52160393 chr19:52160378-52160396 chr19:52160380-52160393
46	CTCF	chr19:52164340-52164490	GM06990	blood:	n/a	chr19:52164418-52164436 chr19:52164420-52164433 chr19:52164419-52164435 chr19:52164413-52164434 chr19:52164424-52164433
47	CTCF	chr19:52160340-52160490	GM12871	blood:	n/a	chr19:52160373-52160394 chr19:52160384-52160393 chr19:52160378-52160396 chr19:52160380-52160393
48	CTCF	chr19:52160280-52160430	HFF	foreskin:	n/a	chr19:52160373-52160394 chr19:52160384-52160393 chr19:52160378-52160396 chr19:52160380-52160393
49	CTCF	chr19:52160259-52160535	GM10266	blood:	n/a	chr19:52160373-52160394 chr19:52160384-52160393 chr19:52160378-52160396 chr19:52160380-52160393
50	CTCF	chr19:52158108-52158412	T-47D	breast:	n/a	n/a

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr19:52148354-52148404	SKMC	muscle:	n/a
2	chr19:52146598-52146648	NH-A	brain:	n/a
3	chr19:52150634-52150684	HRCEpiC	kidney:	n/a
4	chr19:52150547-52150597	A549	lung:	n/a
5	chr19:52150634-52150684	CMK	blood:	n/a
6	chr19:52150634-52150684	SKMC	muscle:	n/a
7	chr19:52146598-52146648	PANC-1	pancreas:	n/a
8	chr19:52150233-52150283	HRE	kidney:	n/a
9	chr19:52150634-52150684	GM06990	blood:	n/a
10	chr19:52150233-52150283	GM12891	blood:	n/a
11	chr19:52150230-52150280	ovcar-3	ovarian:	n/a
12	chr19:52150547-52150597	HL-60	blood:	n/a
13	chr19:52150230-52150280	AG04449	skin:	fetal
14	chr19:52148354-52148404	HCPEpiC	choroid plexus:	n/a
15	chr19:52150230-52150280	HCF	heart:	n/a
16	chr19:52150230-52150280	GM19239	blood:	n/a
17	chr19:52150233-52150283	SK-N-SH	brain:	n/a
18	chr19:52150233-52150283	HCT-116	colon:	n/a
19	chr19:52150233-52150283	HEK293	kidney:	embryo
20	chr19:52150230-52150280	T-47D	breast:	n/a
21	chr19:52150547-52150597	HEEpiC	esophagus:	n/a
22	chr19:52148354-52148404	HL-60	blood:	n/a
23	chr19:52150230-52150280	SAEC	small airway:	n/a
24	chr19:52150634-52150684	AG09319	gingival:	n/a
25	chr19:52148354-52148404	RPTEC	kidney:	n/a
26	chr19:52150230-52150280	IMR90	lung:	fetal
27	chr19:52148354-52148404	H1-hESC	embryonic stem cell:	embryo
28	chr19:52148354-52148404	LNCaP	prostate:	n/a
29	chr19:52148354-52148404	AG09309	skin:	n/a
30	chr19:52148354-52148404	HepG2	liver:	n/a
31	chr19:52150547-52150597	Jurkat	blood:	n/a
32	chr19:52148354-52148404	HEEpiC	esophagus:	n/a
33	chr19:52150634-52150684	A549	lung:	n/a
34	chr19:52146598-52146648	H1-hESC	embryonic stem cell:	embryo
35	chr19:52150233-52150283	K562	blood:	n/a
36	chr19:52148354-52148404	Caco-2	colon:	n/a
37	chr19:52150233-52150283	BE2_C	brain:	n/a
38	chr19:52148354-52148404	PFSK-1	brain:	n/a
39	chr19:52150547-52150597	SAEC	small airway:	n/a
40	chr19:52150547-52150597	NT2-D1	testis:	n/a
41	chr19:52150233-52150283	ProgFib	skin:	n/a
42	chr19:52150634-52150684	HUVEC	blood vessel:	n/a
43	chr19:52150547-52150597	HRCEpiC	kidney:	n/a
44	chr19:52146598-52146648	MCF-7	breast:	n/a
45	chr19:52150634-52150684	AG10803	skin:	n/a
46	chr19:52150547-52150597	HCM	heart:	n/a
47	chr19:52150233-52150283	Caco-2	colon:	n/a
48	chr19:52150547-52150597	HRPEpiC	eye:	n/a
49	chr19:52150230-52150280	HRPEpiC	eye:	n/a
50	chr19:52148354-52148404	GM12891	blood:	n/a

No.	Distal block	Cell Line	Cell type
1	chr19:51975890..51976812-chr19:52159933..52160756,4	K562	blood:
2	chr19:52110880..52111497-chr19:52159833..52160812,2	MCF-7	breast:
3	chr19:51924957..51925780-chr19:52163911..52164893,4	K562	blood:
4	chr19:52143293..52145764-chr19:52146395..52148250,2	K562	blood:
5	chr19:52163388..52165647-chr19:52189785..52191588,2	MCF-7	breast:
6	chr19:52110839..52111869-chr19:52159924..52160844,8	MCF-7	breast:
7	chr19:52050848..52053096-chr19:52143769..52145532,2	K562	blood:
8	chr19:51975913..51977254-chr19:52159906..52161263,12	MCF-7	breast:
9	chr19:51975931..51976838-chr19:52160089..52160663,2	MCF-7	breast:
10	chr19:52160319..52160911-chr19:52311474..52312517,3	K562	blood:
11	chr19:52159931..52161750-chr19:52173076..52176072,2	K562	blood:
12	chr19:52164333..52164883-chr19:52286275..52287235,2	K562	blood:
13	chr19:52110556..52111829-chr19:52157738..52158676,7	MCF-7	breast:
14	chr19:51901444..51901990-chr19:52164321..52164914,2	K562	blood:
15	chr19:52160347..52160857-chr19:52281258..52281779,2	K562	blood:
16	chr19:51965493..51967976-chr19:52153295..52156025,2	K562	blood:
17	chr19:52143293..52145764-chr19:52146395..52148250,2	K562	blood:
18	chr19:51975672..51976584-chr19:52164011..52164572,3	MCF-7	breast:
19	chr19:51924885..51925819-chr19:52159862..52160853,7	K562	blood:
20	chr19:52014761..52015333-chr19:52159948..52160615,2	MCF-7	breast:
21	chr19:52140352..52141294-chr19:52160036..52160673,2	K562	blood:
22	chr19:52165001..52167520-chr19:52168782..52171133,2	K562	blood:
23	chr19:51874861..51877749-chr19:52158879..52160406,2	K562	blood:
24	chr19:51873847..51875580-chr19:52152831..52155624,2	K562	blood:
25	chr19:52017645..52019212-chr19:52145235..52147486,2	MCF-7	breast:
26	chr19:51925281..51925822-chr19:52159922..52160574,2	MCF-7	breast:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-SIGLEC14-1	chr19:52148730-52148798	ENSG00000258669.1
2	lnc-ZNF175-5	chr19:52152115-52152863	NONHSAT067458

Variant related genes	Relation type
SIGLEC14	TF binding region
ENSG00000268500	TF binding region
RPL7P51	TF binding region
SIGLEC5	TF binding region
SIGLEC14	CpG island
ENSG00000268500	CpG island
RPL7P51	CpG island
SIGLEC5	CpG island
ENSG00000105374	chromatin interactions

Extended variants
information (count: 1020 )
Associated
traits (count: 65 )

Variant overlapped rSNPs/rCNVs (count:1020 , 50 per page) page: 1 2 3 4 5 6 7 ... 21

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs535698145	chr19:52142351-52142352	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs182788324	chr19:52142413-52142414	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs34941845	chr19:52142529-52142530	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs6509562	chr19:52142631-52142632	Strong transcription Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
5	rs372392405	chr19:52142666-52142667	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs6509563	chr19:52142690-52142691	Strong transcription Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
7	rs575990872	chr19:52142771-52142772	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs150105779	chr19:52142802-52142803	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs555550846	chr19:52142829-52142830	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs12973490	chr19:52142854-52142855	Strong transcription Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
11	rs554348989	chr19:52142863-52142864	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs534634605	chr19:52143049-52143050	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs562943995	chr19:52143061-52143062	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs138396649	chr19:52143099-52143100	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs111855620	chr19:52143186-52143187	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs533227065	chr19:52143235-52143236	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs544991351	chr19:52143270-52143271	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs374509841	chr19:52143306-52143307	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs541667761	chr19:52143332-52143333	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs541626907	chr19:52143352-52143353	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs564489648	chr19:52143362-52143363	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs560032642	chr19:52143363-52143364	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs79668479	chr19:52143378-52143379	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs114702172	chr19:52143406-52143407	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs187111684	chr19:52143408-52143409	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs202010613	chr19:52143435-52143436	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs547537259	chr19:52143520-52143521	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs143608387	chr19:52143523-52143524	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs76083662	chr19:52143529-52143530	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs138197262	chr19:52143548-52143549	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs143678003	chr19:52143638-52143639	Genic enhancers Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs75898095	chr19:52143643-52143644	Genic enhancers Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs191495821	chr19:52143687-52143688	Genic enhancers Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs573732070	chr19:52143694-52143695	Genic enhancers Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs114135043	chr19:52143704-52143705	Genic enhancers Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs549384860	chr19:52143732-52143733	Genic enhancers Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs184117235	chr19:52143763-52143764	Genic enhancers Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs78196455	chr19:52143825-52143826	Genic enhancers Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs189084353	chr19:52143873-52143874	Genic enhancers Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs577795212	chr19:52143878-52143879	Genic enhancers Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs193138629	chr19:52143903-52143904	Genic enhancers Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs185663113	chr19:52143970-52143971	Genic enhancers Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs563480824	chr19:52143997-52143998	Genic enhancers Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs576375761	chr19:52143998-52143999	Genic enhancers Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs2122894	chr19:52144026-52144027	Genic enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
46	rs533807702	chr19:52144052-52144053	Genic enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs114661837	chr19:52144088-52144089	Genic enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs11883114	chr19:52144089-52144090	Genic enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
49	rs11883097	chr19:52144159-52144160	Genic enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
50	rs538894330	chr19:52144160-52144161	Genic enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:65)

Disease	PMID	Source
Myelodysplastic syndrome	17634407	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Cancer	21637783	CNVD
Retinoblastoma	21504564	CNVD
Medulloblastoma	21979893	CNVD
Ovarian cancer	21720365	CNVD
Cancer	20164919	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Prostate cancer	18632612	CNVD
Ductal carcinoma	22052326	CNVD
Congenital nephrotic syndrome	18421352	CNVD
Astrocytoma	17934521	CNVD
Leukemia	17361228	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Breast cancer	17603634	CNVD
Glioma	21971842	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Endometrial cancer	22040021	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Oligodendroglial tumors	17285580	CNVD
renal disease	20603712	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Salivary gland adenoid cystic carcinoma	17545515	CNVD
Breast cancer	16608533	CNVD
Neuroblastoma	18923191	CNVD
Chordoma	18071362	CNVD
Urothelial carcinoma	21177765	CNVD
Metanephric adenoma	20802469	CNVD
Acute myeloid leukemia	16864856	CNVD
Bladder cancer	21909424	CNVD
Medulloblastoma	16783165	CNVD
Acute myeloid leukemia	20729466	CNVD
Ovarian cancer	22174824	CNVD
Multiple myeloma	16616336	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Wilms tumour	21544195	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Congenital anomalies of the kidney and urinary tract	18852474	CNVD
Glioblastoma multiforme	17002787	CNVD
Cervical cancer	21062161	CNVD
Primary central nervous system lymphoma	21088137	CNVD
Prostate cancer	16573809	CNVD
small cell lung cancer	20016488	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Myelofibrosis	22110671	CNVD
Gastric adenocarcinoma	19115996	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Adrenocortical carcinoma	18281524	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Lung cancer	18438408	CNVD
Basal cell lymphoma	19029149	CNVD
Diffuse large b-cell lymphoma	19029149	CNVD
Colorectal cancer	16272173	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Ovarian cancer	21781307	CNVD
Neuroblastoma	20406844	CNVD
Cancer	20164920	CNVD
Melanoma	17363583	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:268 , 50 per page) page: 1 2 3 4 5 6

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:52134200-52144400	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
2	chr19:52141200-52142400	Weak transcription	Primary B cells from peripheral blood	blood
3	chr19:52141200-52142600	Weak transcription	Monocytes-CD14+_RO01746	blood
4	chr19:52142200-52143600	Strong transcription	Primary monocytes fromperipheralblood	blood
5	chr19:52142400-52143600	Strong transcription	Primary B cells from peripheral blood	blood
6	chr19:52142600-52144000	Strong transcription	Monocytes-CD14+_RO01746	blood
7	chr19:52143600-52147800	Genic enhancers	Primary monocytes fromperipheralblood	blood
8	chr19:52143600-52147800	Genic enhancers	Primary B cells from peripheral blood	blood
9	chr19:52144000-52144200	Weak transcription	Monocytes-CD14+_RO01746	blood
10	chr19:52144200-52145400	Enhancers	Monocytes-CD14+_RO01746	blood
11	chr19:52144400-52144600	Enhancers	Primary mononuclear cells fromperipheralblood	Blood
12	chr19:52144600-52146400	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
13	chr19:52144600-52146800	Weak transcription	Spleen	Spleen
14	chr19:52145400-52145600	Genic enhancers	Monocytes-CD14+_RO01746	blood
15	chr19:52145400-52148000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
16	chr19:52145600-52147800	Enhancers	Primary B cells from cord blood	blood
17	chr19:52145600-52147800	Transcr. at gene 5' and 3'	Monocytes-CD14+_RO01746	blood
18	chr19:52146400-52147200	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
19	chr19:52146400-52147800	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
20	chr19:52146400-52148400	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
21	chr19:52146800-52147200	Weak transcription	Lung	lung
22	chr19:52146800-52147800	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
23	chr19:52146800-52148000	Genic enhancers	Spleen	Spleen
24	chr19:52146800-52150200	Active TSS	Primary neutrophils fromperipheralblood	blood
25	chr19:52147200-52147400	Enhancers	Lung	lung
26	chr19:52147200-52148200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
27	chr19:52147200-52153400	Weak transcription	Right Atrium	heart
28	chr19:52147400-52147600	Bivalent Enhancer	Skeletal Muscle Female	skeletal muscle
29	chr19:52147400-52149200	Enhancers	GM12878-XiMat	blood
30	chr19:52147600-52147800	Bivalent Enhancer	Rectal Mucosa Donor 29	rectum
31	chr19:52147600-52147800	Enhancers	Rectal Mucosa Donor 31	rectum
32	chr19:52147600-52148000	Enhancers	Primary hematopoietic stem cells short term culture	blood
33	chr19:52147800-52148000	Genic enhancers	Primary mononuclear cells fromperipheralblood	Blood
34	chr19:52147800-52148000	Flanking Bivalent TSS/Enh	Rectal Mucosa Donor 29	rectum
35	chr19:52147800-52148200	Transcr. at gene 5' and 3'	Primary monocytes fromperipheralblood	blood
36	chr19:52147800-52148200	Bivalent/Poised TSS	Brain Anterior Caudate	brain
37	chr19:52147800-52148400	Enhancers	H9 Cell Line	embryonic stem cell
38	chr19:52147800-52148400	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
39	chr19:52147800-52148400	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
40	chr19:52147800-52149000	Flanking Active TSS	Primary B cells from cord blood	blood
41	chr19:52147800-52149000	Transcr. at gene 5' and 3'	Primary B cells from peripheral blood	blood
42	chr19:52147800-52149000	Enhancers	Primary hematopoietic stem cells	blood
43	chr19:52147800-52149200	Active TSS	Brain Substantia Nigra	brain
44	chr19:52147800-52149600	Active TSS	Thymus	Thymus
45	chr19:52148000-52148200	Bivalent Enhancer	ES-WA7 Cell Line	embryonic stem cell
46	chr19:52148000-52148200	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
47	chr19:52148000-52148200	Flanking Active TSS	Primary mononuclear cells fromperipheralblood	Blood
48	chr19:52148000-52148200	Flanking Active TSS	Rectal Mucosa Donor 29	rectum
49	chr19:52148000-52148200	Bivalent Enhancer	HepG2	liver
50	chr19:52148000-52148400	Weak transcription	Primary hematopoietic stem cells short term culture	blood

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