Variant report
Variant | nsv1065259 |
---|---|
Chromosome Location | chr16:33380754-33811489 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:3265)
- CpG islands (count:1773)
- Chromatin interactive region (count:22)
- LncRNA region (count:17)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No. | Transcrition factor | Chromosome Location | Cell Line | Cell type | Cell Stage | Matched TF binding sites |
---|---|---|---|---|---|---|
1 | ARID3A | chr16:33502987-33503033 | HepG2 | liver: | n/a | n/a |
2 | ARID3A | chr16:33577202-33577382 | HepG2 | liver: | n/a | n/a |
3 | ATF1 | chr16:33446622-33446661 | K562 | blood: | n/a | n/a |
4 | ATF1 | chr16:33544959-33544976 | K562 | blood: | n/a | n/a |
5 | ATF1 | chr16:33535249-33535260 | K562 | blood: | n/a | n/a |
6 | ATF3 | chr16:33569376-33569681 | K562 | blood: | n/a | n/a |
7 | ATF3 | chr16:33764110-33764276 | K562 | blood: | n/a | n/a |
8 | ATF3 | chr16:33619018-33619453 | K562 | blood: | n/a | n/a |
9 | ATF3 | chr16:33569464-33569595 | GM12878 | blood: | n/a | n/a |
10 | BATF | chr16:33716043-33716353 | GM12878 | blood: | n/a | n/a |
11 | BATF | chr16:33524553-33524907 | GM12878 | blood: | n/a | chr16:33524743-33524752 |
12 | BATF | chr16:33564248-33564454 | GM12878 | blood: | n/a | n/a |
13 | BATF | chr16:33521180-33521433 | GM12878 | blood: | n/a | n/a |
14 | BATF | chr16:33521242-33521484 | GM12878 | blood: | n/a | n/a |
15 | BATF | chr16:33517619-33517865 | GM12878 | blood: | n/a | n/a |
16 | BATF | chr16:33448828-33449178 | GM12878 | blood: | n/a | chr16:33449053-33449063 |
17 | BATF | chr16:33448799-33449188 | GM12878 | blood: | n/a | chr16:33449053-33449063 |
18 | BATF | chr16:33647061-33647311 | GM12878 | blood: | n/a | n/a |
19 | BATF | chr16:33517629-33517889 | GM12878 | blood: | n/a | n/a |
20 | BATF | chr16:33524710-33524926 | GM12878 | blood: | n/a | chr16:33524743-33524752 |
21 | BATF | chr16:33431461-33431755 | GM12878 | blood: | n/a | chr16:33431606-33431617 |
22 | BATF | chr16:33585762-33586003 | GM12878 | blood: | n/a | n/a |
23 | BATF | chr16:33589201-33589438 | GM12878 | blood: | n/a | n/a |
24 | BATF | chr16:33458798-33459290 | GM12878 | blood: | n/a | n/a |
25 | BATF | chr16:33445892-33446115 | GM12878 | blood: | n/a | chr16:33445964-33445975 chr16:33445982-33445990 |
26 | BATF | chr16:33563865-33564062 | GM12878 | blood: | n/a | n/a |
27 | BATF | chr16:33763898-33764246 | GM12878 | blood: | n/a | n/a |
28 | BATF | chr16:33673521-33673717 | GM12878 | blood: | n/a | n/a |
29 | BATF | chr16:33445748-33446186 | GM12878 | blood: | n/a | chr16:33445964-33445975 chr16:33445982-33445990 |
30 | BATF | chr16:33722423-33722618 | GM12878 | blood: | n/a | n/a |
31 | BATF | chr16:33431441-33431744 | GM12878 | blood: | n/a | chr16:33431606-33431617 |
32 | BATF | chr16:33446462-33446750 | GM12878 | blood: | n/a | n/a |
33 | BCL11A | chr16:33722355-33722924 | GM12878 | blood: | n/a | n/a |
34 | BCL11A | chr16:33521254-33521467 | GM12878 | blood: | n/a | n/a |
35 | BCL11A | chr16:33446218-33446393 | GM12878 | blood: | n/a | n/a |
36 | BCL11A | chr16:33589217-33589463 | GM12878 | blood: | n/a | n/a |
37 | BCL11A | chr16:33458814-33459180 | GM12878 | blood: | n/a | n/a |
38 | BCL11A | chr16:33518137-33518397 | GM12878 | blood: | n/a | n/a |
39 | BCL11A | chr16:33763969-33764256 | GM12878 | blood: | n/a | n/a |
40 | BCL11A | chr16:33585333-33585647 | GM12878 | blood: | n/a | n/a |
41 | BCL11A | chr16:33517674-33517848 | GM12878 | blood: | n/a | n/a |
42 | BCL11A | chr16:33722347-33722700 | GM12878 | blood: | n/a | n/a |
43 | BCL11A | chr16:33460213-33460485 | GM12878 | blood: | n/a | chr16:33460375-33460384 |
44 | BCL11A | chr16:33431460-33431699 | GM12878 | blood: | n/a | n/a |
45 | BCL11A | chr16:33492453-33492646 | GM12878 | blood: | n/a | n/a |
46 | BCL11A | chr16:33521194-33521489 | GM12878 | blood: | n/a | n/a |
47 | BCL11A | chr16:33431491-33431778 | GM12878 | blood: | n/a | n/a |
48 | BCL11A | chr16:33524561-33524846 | GM12878 | blood: | n/a | n/a |
49 | BCL11A | chr16:33647047-33647229 | GM12878 | blood: | n/a | n/a |
50 | BCL11A | chr16:33448833-33449216 | GM12878 | blood: | n/a | chr16:33449056-33449065 chr16:33449055-33449064 |
No. | Chromosome Location | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr16:33730539-33730589 | SAEC | small airway: | n/a |
2 | chr16:33483462-33483512 | NHDF-neo | bronchial: | n/a |
3 | chr16:33570115-33570165 | SK-N-SH | brain: | n/a |
4 | chr16:33779917-33779967 | NHBE | bronchial: | n/a |
5 | chr16:33730539-33730589 | SAEC | small airway: | n/a |
6 | chr16:33483462-33483512 | NHDF-neo | bronchial: | n/a |
7 | chr16:33570115-33570165 | SK-N-SH | brain: | n/a |
8 | chr16:33779917-33779967 | NHBE | bronchial: | n/a |
9 | chr16:33574151-33574201 | BE2_C | brain: | n/a |
10 | chr16:33730539-33730589 | NT2-D1 | testis: | n/a |
11 | chr16:33627536-33627586 | HMEC | breast: | n/a |
12 | chr16:33627215-33627265 | RPTEC | kidney: | n/a |
13 | chr16:33783802-33783852 | Jurkat | blood: | n/a |
14 | chr16:33570021-33570071 | ProgFib | skin: | n/a |
15 | chr16:33779917-33779967 | GM12878 | blood: | n/a |
16 | chr16:33730539-33730589 | Hela-S3 | cervix: | n/a |
17 | chr16:33573272-33573322 | ovcar-3 | ovarian: | n/a |
18 | chr16:33783802-33783852 | HEEpiC | esophagus: | n/a |
19 | chr16:33483299-33483349 | HPAEpiC | pulmonary alveolar: | n/a |
20 | chr16:33483297-33483347 | HCT-116 | colon: | n/a |
21 | chr16:33627215-33627265 | IMR90 | lung: | fetal |
22 | chr16:33509433-33509483 | HRE | kidney: | n/a |
23 | chr16:33604228-33604278 | NHBE | bronchial: | n/a |
24 | chr16:33509523-33509573 | SAEC | small airway: | n/a |
25 | chr16:33483462-33483512 | HRCEpiC | kidney: | n/a |
26 | chr16:33481620-33481670 | HIPEpiC | eye: | n/a |
27 | chr16:33605185-33605235 | ECC-1 | luminal epithelium: | n/a |
28 | chr16:33730558-33730608 | HEEpiC | esophagus: | n/a |
29 | chr16:33783802-33783852 | HAEpiC | amniotic membrane: | n/a |
30 | chr16:33604228-33604278 | HCF | heart: | n/a |
31 | chr16:33487438-33487488 | HCPEpiC | choroid plexus: | n/a |
32 | chr16:33730558-33730608 | HNPCEpiC | eye: | n/a |
33 | chr16:33570021-33570071 | HRCEpiC | kidney: | n/a |
34 | chr16:33483591-33483641 | NB4 | blood: | n/a |
35 | chr16:33574151-33574201 | AG09309 | skin: | n/a |
36 | chr16:33734837-33734887 | H1-hESC | embryonic stem cell: | embryo |
37 | chr16:33509433-33509483 | NHDF-neo | bronchial: | n/a |
38 | chr16:33574151-33574201 | AG04450 | lung: | fetal |
39 | chr16:33574151-33574201 | NB4 | blood: | n/a |
40 | chr16:33574151-33574201 | HRE | kidney: | n/a |
41 | chr16:33627536-33627586 | GM06990 | blood: | n/a |
42 | chr16:33509433-33509483 | ProgFib | skin: | n/a |
43 | chr16:33730539-33730589 | NHDF-neo | bronchial: | n/a |
44 | chr16:33605185-33605235 | BE2_C | brain: | n/a |
45 | chr16:33483244-33483294 | Hela-S3 | cervix: | n/a |
46 | chr16:33570021-33570071 | AG10803 | skin: | n/a |
47 | chr16:33627536-33627586 | Hepatocyte | liver: | n/a |
48 | chr16:33571945-33571995 | HRE | kidney: | n/a |
49 | chr16:33776910-33776960 | AG04450 | lung: | fetal |
50 | chr16:33783802-33783852 | A549 | lung: | n/a |
(count:22 , 50 per page) page:
1
No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr16:33618975..33619481-chr6:120699536..120700074,2 | MCF-7 | breast: | |
2 | chr16:33618632..33619607-chr16:33646788..33647301,2 | MCF-7 | breast: | |
3 | chr16:33535568..33538409-chr16:33539107..33541473,2 | K562 | blood: | |
4 | chr16:33618887..33619679-chr16:33739842..33740784,2 | MCF-7 | breast: | |
5 | chr16:33618632..33619607-chr16:33646788..33647301,2 | MCF-7 | breast: | |
6 | chr16:33374454..33377112-chr16:33390580..33392185,2 | MCF-7 | breast: | |
7 | chr16:33599590..33601128-chr16:33607194..33610110,2 | K562 | blood: | |
8 | chr16:33618869..33619686-chr16:33955996..33956882,3 | MCF-7 | breast: | |
9 | chr16:33535568..33538409-chr16:33539107..33541473,2 | K562 | blood: | |
10 | chr16:33599590..33601128-chr16:33607194..33610110,2 | K562 | blood: | |
11 | chr13:30046484..30047067-chr16:33618956..33619795,2 | MCF-7 | breast: | |
12 | chr16:33618687..33619546-chr21:22589708..22590404,2 | MCF-7 | breast: | |
13 | chr1:121484857..121485377-chr16:33618718..33619247,2 | MCF-7 | breast: | |
14 | chr16:33618887..33619679-chr16:33739842..33740784,2 | MCF-7 | breast: | |
15 | chr16:33501621..33504383-chr16:33506713..33508666,2 | K562 | blood: | |
16 | chr16:32951293..32951850-chr16:33618657..33619267,2 | MCF-7 | breast: | |
17 | chr16:33618559..33619759-chr16:33646461..33647717,8 | MCF-7 | breast: | |
18 | chr14:107287133..107287781-chr16:33618600..33619120,3 | MCF-7 | breast: | |
19 | chr16:32993835..32994354-chr16:33619041..33619624,2 | MCF-7 | breast: | |
20 | chr16:32876653..32877208-chr16:33618895..33619446,2 | MCF-7 | breast: | |
21 | chr12:123886567..123888097-chr16:33420189..33423186,2 | K562 | blood: | |
22 | chr16:33501621..33504383-chr16:33506713..33508666,2 | K562 | blood: |
(count:17 , 50 per page) page:
1
No. | lncRNA name | Chromosome Location | lncRNA alias |
---|---|---|---|
1 | lnc-AC140658.1-5 | chr16:33768513-33768558 | NONHSAT142119 |
2 | lnc-AC140658.1-6 | chr16:33778750-33778813 | ENSG00000205452.4 |
3 | lnc-AC140658.1-6 | chr16:33776448-33776670 | ENSG00000205452.4 |
4 | lnc-AC140658.1-6 | chr16:33776476-33776670 | ENSG00000205452.4 |
5 | lnc-AC140658.1-6 | chr16:33775514-33776189 | ENSG00000205452.4 |
6 | lnc-AC140658.1-6 | chr16:33777320-33777532 | ENSG00000205452.4 |
7 | lnc-AC136428.1.1-10 | chr16:33677891-33677935 | NONHSAT142113 |
8 | lnc-AC136428.1.1-1 | chr16:33661001-33661077 | ENSG00000260312.1 |
9 | lnc-AC140658.1-6 | chr16:33776833-33776957 | ENSG00000205452.4 |
10 | lnc-AC140658.1-3 | chr16:33750745-33751015 | NONHSAT142117 |
11 | lnc-AC140658.1-6 | chr16:33777416-33777550 | ENSG00000205452.4 |
12 | lnc-AC140658.1-6 | chr16:33775379-33776670 | ENSG00000205452.4 |
13 | lnc-AC136428.1.1-1 | chr16:33660402-33660589 | ENSG00000260312.1 |
14 | lnc-AC136428.1.1-1 | chr16:33661251-33661331 | ENSG00000260312.1 |
15 | lnc-AC136428.1.1-10 | chr16:33677506-33677808 | NONHSAT142113 |
16 | lnc-AC140658.1-5 | chr16:33768122-33768427 | NONHSAT142119 |
17 | lnc-AC140658.1-6 | chr16:33777235-33777744 | ENSG00000205452.4 |
No data |
No data |
Variant related genes | Relation type |
---|---|
ENSG00000205452 | TF binding region |
ENSG00000260525 | TF binding region |
IGHV3OR16-16 | TF binding region |
ENSG00000261153 | TF binding region |
ENSG00000259680 | TF binding region |
ENSG00000260312 | TF binding region |
IGHV3OR16-13 | TF binding region |
ENPP7P13 | TF binding region |
ENSG00000198555 | TF binding region |
ENSG00000261607 | TF binding region |
IGHV3OR16-12 | TF binding region |
ENSG00000259882 | TF binding region |
ENSG00000270401 | TF binding region |
ENSG00000260308 | TF binding region |
ENSG00000261217 | TF binding region |
IGHV3OR16-11 | TF binding region |
IGHV3OR16-7 | TF binding region |
ENSG00000271691 | TF binding region |
ENSG00000270924 | TF binding region |
ARHGAP23P1 | TF binding region |
BMS1P8 | TF binding region |
ENSG00000205452 | CpG island |
ENSG00000260525 | CpG island |
IGHV3OR16-16 | CpG island |
ENSG00000261153 | CpG island |
ENSG00000259680 | CpG island |
ENSG00000260312 | CpG island |
IGHV3OR16-13 | CpG island |
ENPP7P13 | CpG island |
ENSG00000198555 | CpG island |
ENSG00000261607 | CpG island |
IGHV3OR16-12 | CpG island |
ENSG00000259882 | CpG island |
ENSG00000270401 | CpG island |
ENSG00000260308 | CpG island |
ENSG00000261217 | CpG island |
IGHV3OR16-11 | CpG island |
IGHV3OR16-7 | CpG island |
ENSG00000271691 | CpG island |
ENSG00000270924 | CpG island |
ARHGAP23P1 | CpG island |
BMS1P8 | CpG island |
ENSG00000259680 | chromatin interactions |
No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs530256389 | chr16:33380763-33380764 | Weak transcription ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
2 | rs542477898 | chr16:33380764-33380765 | Weak transcription ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
3 | rs560633446 | chr16:33380772-33380773 | Weak transcription ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
4 | rs527240613 | chr16:33380776-33380777 | Weak transcription ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
5 | rs552246537 | chr16:33380810-33380811 | Weak transcription ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
6 | rs570550947 | chr16:33380831-33380832 | Weak transcription ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
7 | rs531465970 | chr16:33380855-33380856 | Weak transcription ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
8 | rs549686156 | chr16:33380897-33380898 | Weak transcription ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
9 | rs370679270 | chr16:33380937-33380938 | Weak transcription ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
10 | rs60062762 | chr16:33380948-33380949 | Weak transcription ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
11 | rs535305704 | chr16:33380949-33380950 | Weak transcription ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
12 | rs375500067 | chr16:33380956-33380957 | Weak transcription ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
13 | rs565639300 | chr16:33380959-33380960 | Weak transcription ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
14 | rs533924010 | chr16:33380960-33380961 | Weak transcription ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
15 | rs558564179 | chr16:33380968-33380969 | Weak transcription ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
16 | rs576905121 | chr16:33380988-33380989 | Weak transcription ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
17 | rs200939196 | chr16:33381018-33381019 | Weak transcription ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
18 | rs368604296 | chr16:33381101-33381102 | Weak transcription ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
19 | rs376025579 | chr16:33381142-33381143 | Weak transcription ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
20 | rs202090438 | chr16:33381147-33381148 | Weak transcription ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
21 | rs79091384 | chr16:33381161-33381162 | Weak transcription ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
22 | rs78214109 | chr16:33381162-33381163 | Weak transcription ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
23 | rs79183673 | chr16:33381164-33381165 | Weak transcription ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
24 | rs533748861 | chr16:33381165-33381166 | Weak transcription ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
25 | rs59489807 | chr16:33381166-33381167 | Weak transcription ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
26 | rs2450581 | chr16:33381173-33381174 | Weak transcription ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
27 | rs182470226 | chr16:33381196-33381197 | Weak transcription ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
28 | rs556401046 | chr16:33381220-33381221 | Weak transcription ZNF genes & repeats Enhancers | n/a | n/a | Overlapped CNVs | n/a |
29 | rs374302932 | chr16:33381222-33381223 | Weak transcription ZNF genes & repeats Enhancers | n/a | n/a | Overlapped CNVs | n/a |
30 | rs9925612 | chr16:33381234-33381235 | Weak transcription ZNF genes & repeats Enhancers | n/a | n/a | Overlapped CNVs | n/a |
31 | rs76960863 | chr16:33381254-33381255 | Weak transcription ZNF genes & repeats Enhancers | n/a | n/a | Overlapped CNVs | n/a |
32 | rs574938011 | chr16:33381300-33381301 | Weak transcription ZNF genes & repeats Enhancers | n/a | n/a | Overlapped CNVs | n/a |
33 | rs542062997 | chr16:33381304-33381305 | Weak transcription ZNF genes & repeats Enhancers | n/a | n/a | Overlapped CNVs | n/a |
34 | rs369392587 | chr16:33381330-33381331 | Weak transcription ZNF genes & repeats Enhancers | n/a | n/a | Overlapped CNVs | n/a |
35 | rs113471229 | chr16:33381332-33381333 | Weak transcription ZNF genes & repeats Enhancers | n/a | n/a | Overlapped CNVs | n/a |
36 | rs149565211 | chr16:33381336-33381337 | Weak transcription ZNF genes & repeats Enhancers | n/a | n/a | Overlapped CNVs | n/a |
37 | rs186883179 | chr16:33381348-33381349 | Weak transcription ZNF genes & repeats Enhancers | n/a | n/a | Overlapped CNVs | n/a |
38 | rs9925518 | chr16:33381367-33381368 | Weak transcription ZNF genes & repeats Enhancers | n/a | n/a | Overlapped CNVs | n/a |
39 | rs111235657 | chr16:33381384-33381385 | Weak transcription ZNF genes & repeats Enhancers | n/a | n/a | Overlapped CNVs | n/a |
40 | rs528030465 | chr16:33381387-33381388 | Weak transcription ZNF genes & repeats Enhancers | n/a | n/a | Overlapped CNVs | n/a |
41 | rs191824678 | chr16:33381398-33381399 | Weak transcription ZNF genes & repeats Enhancers | n/a | n/a | Overlapped CNVs | n/a |
42 | rs564096812 | chr16:33381459-33381460 | Weak transcription ZNF genes & repeats Enhancers | n/a | n/a | Overlapped CNVs | n/a |
43 | rs531354246 | chr16:33381519-33381520 | Weak transcription ZNF genes & repeats Enhancers | n/a | n/a | Overlapped CNVs | n/a |
44 | rs549813871 | chr16:33381533-33381534 | Weak transcription ZNF genes & repeats Enhancers | n/a | n/a | Overlapped CNVs | n/a |
45 | rs9925968 | chr16:33381558-33381559 | Weak transcription ZNF genes & repeats Enhancers | n/a | n/a | Overlapped CNVs | n/a |
46 | rs377670063 | chr16:33381563-33381564 | Weak transcription ZNF genes & repeats Enhancers | n/a | n/a | Overlapped CNVs | n/a |
47 | rs113247761 | chr16:33381581-33381582 | Weak transcription ZNF genes & repeats Enhancers | n/a | n/a | Overlapped CNVs | n/a |
48 | rs529036802 | chr16:33381588-33381589 | Weak transcription ZNF genes & repeats Enhancers | n/a | n/a | Overlapped CNVs | n/a |
49 | rs370731674 | chr16:33381594-33381595 | Weak transcription ZNF genes & repeats Enhancers | n/a | n/a | Overlapped CNVs | n/a |
50 | rs547316903 | chr16:33381625-33381626 | Weak transcription ZNF genes & repeats Enhancers | n/a | n/a | Overlapped CNVs | n/a |
Disease | PMID | Source |
---|---|---|
Hodgkin''s lymphoma | 20651079 | CNVD |
Metanephric adenoma | 20802469 | CNVD |
Melanoma | 18172304 | CNVD |
Breast cancer | 16608533 | CNVD |
Basal cell lymphoma | 16317097 | CNVD |
Diffuse large b-cell lymphoma | 16317097 | CNVD |
Breast cancer | 17133270 | CNVD |
Endometrioid adenocarcinoma | 16974079 | CNVD |
Adenoid cystic carcinoma | 17372589 | CNVD |
Lung adenocarcinoma | 17086460 | CNVD |
Lung cancer | 17086460 | CNVD |
Autism | 22566537 | CNVD |
Intellectual disability | 22566537 | CNVD |
Non-syndromic sensorineural hearing loss | 18471307 | CNVD |
Acute lymphoblastic leukemia | 20067559 | CNVD |
Endometrial cancer | 22040021 | CNVD |
Ewing''s sarcoma | 21437220 | CNVD |
Astrocytoma | 17387387 | CNVD |
Breast cancer | 17603634 | CNVD |
Breast cancer | 21264507 | CNVD |
Cervical cancer | 21063398 | CNVD |
Esophageal squamous carcinoma | 21637470 | CNVD |
Glioblastoma multiforme | 21080181 | CNVD |
Acute lymphoblastic leukemia | 17690704 | CNVD |
Autism | 19415332 | CNVD |
Medulloblastoma | 21979893 | CNVD |
Non-syndromic sensorineural hearing loss | 22037309 | CNVD |
Schizophrenia | 22958593 | CNVD |
Ductal carcinoma | 22052326 | CNVD |
Thoracic aortic aneurysm | 21092924 | CNVD |
Autism | 22495311 | CNVD |
Breast cancer | 20668451 | CNVD |
Cancer | 20668451 | CNVD |
Lung cancer | 20668451 | CNVD |
Ovarian cancer | 20668451 | CNVD |
Pancreas cancer | 20668451 | CNVD |
Prostate cancer | 20668451 | CNVD |
Acute lymphoblastic leukemia | 22237106 | CNVD |
Hodgkin''s lymphoma | 17606441 | CNVD |
T-cell prolymphocytic leukemia | 19278963 | CNVD |
Breast cancer | 21858162 | CNVD |
Hepatocellular carcinoma | 16750200 | CNVD |
Mental retardation | 19951919 | CNVD |
Colorectal cancer | 16272173 | CNVD |
small cell lung cancer | 20016488 | CNVD |
Breast cancer | 21785460 | CNVD |
T-cell prolymphocytic leukemia | 17713554 | CNVD |
Breast cancer | 21990379 | CNVD |
Astrocytoma | 22246337 | CNVD |
Myelofibrosis | 22110671 | CNVD |
Epilepsy | 22499536 | CNVD |
Attention deficit hyperactivity disorder | 21324949 | CNVD |
Austim spectrum disorder | 21302340 | CNVD |
Autism | 22513405 | CNVD |
Autism | 22958593 | CNVD |
Autism | 18184952 | CNVD |
Autism | 19966786 | CNVD |
Autism | 21394203 | CNVD |
Autism | 21969575 | CNVD |
Autism | 22241247 | CNVD |
Autism | 20970697 | CNVD |
Autism | 20942916 | CNVD |
Epilepsy | 20970697 | CNVD |
Intellectual disability | 22045946 | CNVD |
Mental retardation | 19966786 | CNVD |
Developmental delay | 20808231 | CNVD |
Obesity | 20808231 | CNVD |
Autism | 18923514 | CNVD |
Obesity | 21881559 | CNVD |
Obesity | 21956041 | CNVD |
Autism | 20659124 | CNVD |
Mental retardation | 21062444 | CNVD |
Schizophrenia | 20587603 | CNVD |
Schizophrenia | 21285140 | CNVD |
Schizophrenia | 22885689 | CNVD |
Schizophrenia | 20553308 | CNVD |
Schizophrenia | 20970697 | CNVD |
Schizophrenia | 20433910 | CNVD |
Schizophrenia | 22241247 | CNVD |
Autism | 19242545 | CNVD |
Primary central nervous system lymphoma | 21088137 | CNVD |
Intracranial ependymoma | 16609018 | CNVD |
Schizophrenia | 21399695 | CNVD |
Autism | 21956041 | CNVD |
Disorders of sex development | 21048976 | CNVD |
Autism | 22067053 | CNVD |
Autism | 18156158 | CNVD |
Mental retardation | 20152051 | CNVD |
Autism | 19218893 | CNVD |
Autism | 21289514 | CNVD |
Schizophrenia | 19855392 | CNVD |
neurodevelopmental Syndrome | 20503337 | CNVD |
Benign familial neonatal-infantile seizures | 21060786 | CNVD |
Low-grade fibromyxoid sarcoma | 0 | CNVD |
Cancer | 21183584 | CNVD |
Low-grade fibromyxoid sarcoma | 21536545 | CNVD |
Breast cancer | 21045282 | CNVD |
Neuroblastoma | 20406844 | CNVD |
Autism | 19050728 | CNVD |
Epilepsy | 20923578 | CNVD |
Psychiatric disorder | 19050728 | CNVD |
Schizophrenia | 19348701 | CNVD |
Attention deficit hyperactivity disorder | 19097825 | CNVD |
Autism | 20964600 | CNVD |
Schizophrenia | 19955444 | CNVD |
Schizophrenia | 18990708 | CNVD |
Schizophrenia | 19571808 | CNVD |
Breast cancer | 20409316 | CNVD |
Severe combined immunodeficiency | 19097825 | CNVD |
Esophageal squamous carcinoma | 18350619 | CNVD |
Autism | 18522746 | CNVD |
Sezary syndrome | 18413736 | CNVD |
Wilms tumour | 21544195 | CNVD |
Non-syndromic sensorineural hearing loss | 17122850 | CNVD |
Cancer | 20164920 | CNVD |
Autism | 19287141 | CNVD |
Schizophrenia | 20967226 | CNVD |
Breast cancer | 17142309 | CNVD |
Cancer | 20164919 | CNVD |
Non-syndromic sensorineural hearing loss | 15273396 | CNVD |
Non-syndromic sensorineural hearing loss | 22297974 | CNVD |
Lung cancer | 18438408 | CNVD |
Breast cancer | 21509527 | CNVD |
early-passage human iPS cells | 21368824 | CNVD |
Breast cancer | 21364760 | CNVD |
Non-syndromic sensorineural hearing loss | 21293372 | CNVD |
Breast cancer | 22522925 | CNVD |
Stenocardia | 21860640 | CNVD |
Vasospasm | 21860640 | CNVD |
Non-syndromic sensorineural hearing loss | 18451855 | CNVD |
Glioma | 20126413 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr16:33377600-33382200 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
2 | chr16:33378200-33382600 | ZNF genes & repeats | HUES48 Cell Line | embryonic stem cell |
3 | chr16:33381200-33383400 | Enhancers | Placenta | Placenta |
4 | chr16:33382200-33382400 | Enhancers | ES-I3 Cell Line | embryonic stem cell |
5 | chr16:33383200-33383600 | Enhancers | Breast Myoepithelial Primary Cells | Breast |
6 | chr16:33383400-33388600 | Weak transcription | Placenta | Placenta |
7 | chr16:33384600-33389000 | ZNF genes & repeats | HUES48 Cell Line | embryonic stem cell |
8 | chr16:33385800-33387400 | Enhancers | GM12878-XiMat | blood |
9 | chr16:33388600-33388800 | Enhancers | Placenta | Placenta |
10 | chr16:33388800-33390000 | Weak transcription | Placenta | Placenta |
11 | chr16:33390000-33392800 | Enhancers | Placenta | Placenta |
12 | chr16:33390600-33391600 | Enhancers | Left Ventricle | heart |
13 | chr16:33390600-33392200 | Enhancers | Breast Myoepithelial Primary Cells | Breast |
14 | chr16:33391600-33392400 | ZNF genes & repeats | Fetal Brain Male | brain |
15 | chr16:33395800-33396200 | Active TSS | H1 Derived Mesenchymal Stem Cells | ES cell derived |
16 | chr16:33396000-33396400 | Bivalent Enhancer | Placenta | Placenta |
17 | chr16:33397600-33398400 | ZNF genes & repeats | ES-UCSF4 Cell Line | embryonic stem cell |
18 | chr16:33401200-33407200 | ZNF genes & repeats | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
19 | chr16:33401400-33402400 | Enhancers | Breast Myoepithelial Primary Cells | Breast |
20 | chr16:33402200-33406200 | Enhancers | Primary B cells from peripheral blood | blood |
21 | chr16:33403000-33403600 | Enhancers | Primary B cells from cord blood | blood |
22 | chr16:33403400-33403800 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
23 | chr16:33403400-33405000 | Enhancers | GM12878-XiMat | blood |
24 | chr16:33403400-33407000 | ZNF genes & repeats | ES-UCSF4 Cell Line | embryonic stem cell |
25 | chr16:33406600-33406800 | ZNF genes & repeats | Duodenum Mucosa | Duodenum |
26 | chr16:33406600-33406800 | Bivalent Enhancer | Placenta | Placenta |
27 | chr16:33406600-33406800 | ZNF genes & repeats | Gastric | stomach |
28 | chr16:33406600-33407000 | ZNF genes & repeats | H1 Derived Mesenchymal Stem Cells | ES cell derived |
29 | chr16:33406600-33407000 | ZNF genes & repeats | Spleen | Spleen |
30 | chr16:33406800-33408400 | Weak transcription | Gastric | stomach |
31 | chr16:33407000-33408200 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
32 | chr16:33407000-33408400 | Weak transcription | Spleen | Spleen |
33 | chr16:33408200-33408600 | ZNF genes & repeats | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
34 | chr16:33408200-33408800 | ZNF genes & repeats | H1 Derived Mesenchymal Stem Cells | ES cell derived |
35 | chr16:33408200-33409000 | ZNF genes & repeats | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
36 | chr16:33408400-33408600 | ZNF genes & repeats | Gastric | stomach |
37 | chr16:33408400-33408600 | ZNF genes & repeats | Spleen | Spleen |
38 | chr16:33408400-33408800 | ZNF genes & repeats | H1 Cell Line | embryonic stem cell |
39 | chr16:33408400-33408800 | ZNF genes & repeats | iPS DF 19.11 Cell Line | embryonic stem cell |
40 | chr16:33409600-33413400 | ZNF genes & repeats | HUES48 Cell Line | embryonic stem cell |
41 | chr16:33412000-33412200 | Weak transcription | Right Atrium | heart |
42 | chr16:33412000-33413200 | Enhancers | Primary B cells from peripheral blood | blood |
43 | chr16:33412600-33413000 | Enhancers | GM12878-XiMat | blood |
44 | chr16:33412800-33413000 | ZNF genes & repeats | Right Atrium | heart |
45 | chr16:33412800-33413200 | Enhancers | Monocytes-CD14+_RO01746 | blood |
46 | chr16:33412800-33417000 | ZNF genes & repeats | ES-UCSF4 Cell Line | embryonic stem cell |
47 | chr16:33413000-33425600 | Weak transcription | Right Atrium | heart |
48 | chr16:33415800-33416200 | ZNF genes & repeats | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
49 | chr16:33415800-33416200 | ZNF genes & repeats | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
50 | chr16:33421600-33422000 | Active TSS | Breast Myoepithelial Primary Cells | Breast |