Variant report
Variant | nsv1065323 |
---|---|
Chromosome Location | chr22:23221846-23275341 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:1326)
- CpG islands (count:0)
- Chromatin interactive region (count:102)
- LncRNA region (count:10)
- Mature miRNA region (count: 2)
- miRNA target sites (count:0)
No. | Transcrition factor | Chromosome Location | Cell Line | Cell type | Cell Stage | Matched TF binding sites |
---|---|---|---|---|---|---|
1 | ARID3A | chr22:23258750-23259076 | HepG2 | liver: | n/a | n/a |
2 | ARID3A | chr22:23226039-23226556 | K562 | blood: | n/a | n/a |
3 | ARID3A | chr22:23232773-23233217 | K562 | blood: | n/a | n/a |
4 | ATF1 | chr22:23232791-23232914 | K562 | blood: | n/a | n/a |
5 | ATF1 | chr22:23234038-23234184 | K562 | blood: | n/a | n/a |
6 | ATF1 | chr22:23249632-23250275 | K562 | blood: | n/a | n/a |
7 | ATF1 | chr22:23246000-23246189 | K562 | blood: | n/a | n/a |
8 | ATF1 | chr22:23254917-23254918 | K562 | blood: | n/a | n/a |
9 | ATF1 | chr22:23239585-23239595 | K562 | blood: | n/a | n/a |
10 | ATF1 | chr22:23262737-23263489 | K562 | blood: | n/a | n/a |
11 | ATF1 | chr22:23233172-23233190 | K562 | blood: | n/a | n/a |
12 | ATF1 | chr22:23253446-23253456 | K562 | blood: | n/a | n/a |
13 | ATF1 | chr22:23270547-23272244 | K562 | blood: | n/a | n/a |
14 | ATF1 | chr22:23223851-23224186 | K562 | blood: | n/a | n/a |
15 | ATF1 | chr22:23266964-23266992 | K562 | blood: | n/a | n/a |
16 | ATF1 | chr22:23252055-23252437 | K562 | blood: | n/a | n/a |
17 | ATF1 | chr22:23251232-23251667 | K562 | blood: | n/a | n/a |
18 | ATF2 | chr22:23241920-23242220 | GM12878 | blood: | n/a | n/a |
19 | ATF2 | chr22:23270734-23271601 | GM12878 | blood: | n/a | n/a |
20 | ATF2 | chr22:23273248-23273796 | GM12878 | blood: | n/a | n/a |
21 | ATF2 | chr22:23248930-23250295 | GM12878 | blood: | n/a | n/a |
22 | ATF2 | chr22:23245204-23245644 | GM12878 | blood: | n/a | n/a |
23 | ATF2 | chr22:23270597-23271768 | GM12878 | blood: | n/a | n/a |
24 | ATF2 | chr22:23248892-23250514 | GM12878 | blood: | n/a | n/a |
25 | ATF2 | chr22:23243571-23245290 | GM12878 | blood: | n/a | n/a |
26 | ATF2 | chr22:23273903-23274587 | GM12878 | blood: | n/a | n/a |
27 | ATF2 | chr22:23243556-23245167 | GM12878 | blood: | n/a | n/a |
28 | ATF2 | chr22:23273983-23274459 | GM12878 | blood: | n/a | n/a |
29 | ATF3 | chr22:23270541-23271262 | K562 | blood: | n/a | n/a |
30 | ATF3 | chr22:23268441-23268917 | K562 | blood: | n/a | chr22:23268625-23268635 |
31 | BACH1 | chr22:23261304-23261342 | K562 | blood: | n/a | n/a |
32 | BACH1 | chr22:23265361-23265362 | K562 | blood: | n/a | n/a |
33 | BACH1 | chr22:23235604-23235617 | K562 | blood: | n/a | n/a |
34 | BACH1 | chr22:23259715-23259720 | K562 | blood: | n/a | n/a |
35 | BATF | chr22:23242547-23242788 | GM12878 | blood: | n/a | n/a |
36 | BATF | chr22:23242924-23243123 | GM12878 | blood: | n/a | n/a |
37 | BATF | chr22:23274036-23274442 | GM12878 | blood: | n/a | n/a |
38 | BATF | chr22:23241823-23242071 | GM12878 | blood: | n/a | n/a |
39 | BATF | chr22:23243646-23244483 | GM12878 | blood: | n/a | n/a |
40 | BATF | chr22:23270934-23271250 | GM12878 | blood: | n/a | chr22:23271120-23271130 chr22:23271115-23271126 chr22:23271116-23271126 |
41 | BATF | chr22:23270779-23271374 | GM12878 | blood: | n/a | chr22:23271120-23271130 chr22:23271115-23271126 chr22:23271116-23271126 |
42 | BATF | chr22:23243142-23243591 | GM12878 | blood: | n/a | n/a |
43 | BATF | chr22:23247193-23247431 | GM12878 | blood: | n/a | n/a |
44 | BATF | chr22:23248534-23248947 | GM12878 | blood: | n/a | n/a |
45 | BCL11A | chr22:23270885-23271275 | GM12878 | blood: | n/a | chr22:23271010-23271019 |
46 | BCL11A | chr22:23274059-23274393 | GM12878 | blood: | n/a | chr22:23274243-23274252 |
47 | BCL11A | chr22:23247624-23250417 | GM12878 | blood: | n/a | chr22:23248333-23248341 |
48 | BCL11A | chr22:23247178-23247521 | GM12878 | blood: | n/a | n/a |
49 | BCL11A | chr22:23274000-23274473 | GM12878 | blood: | n/a | chr22:23274243-23274252 |
50 | BCL11A | chr22:23241808-23242192 | GM12878 | blood: | n/a | n/a |
No data |
No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr22:23225838..23226619-chr22:23284830..23285631,2 | MCF-7 | breast: | |
2 | chr22:23245468..23247565-chr22:23249258..23251335,3 | K562 | blood: | |
3 | chr22:23237287..23240210-chr22:23254703..23257164,2 | K562 | blood: | |
4 | chr22:23190657..23191158-chr22:23221234..23221856,2 | MCF-7 | breast: | |
5 | chr22:23248970..23251030-chr22:23266059..23268328,2 | K562 | blood: | |
6 | chr22:23236796..23239209-chr22:23258890..23261514,2 | K562 | blood: | |
7 | chr22:23211923..23213773-chr22:23255638..23258101,2 | K562 | blood: | |
8 | chr22:23270409..23272197-chr22:23283086..23285103,2 | K562 | blood: | |
9 | chr22:23197561..23198498-chr22:23225909..23226760,4 | MCF-7 | breast: | |
10 | chr22:23238067..23240289-chr22:23256904..23258643,2 | K562 | blood: | |
11 | chr22:23221282..23222436-chr22:23297430..23298768,6 | K562 | blood: | |
12 | chr22:23209213..23217761-chr22:23218680..23225752,11 | K562 | blood: | |
13 | chr22:23254052..23256994-chr22:23268482..23271052,2 | K562 | blood: | |
14 | chr22:23221725..23222375-chr22:23284654..23285494,2 | K562 | blood: | |
15 | chr22:23237456..23241868-chr22:23242613..23249057,9 | K562 | blood: | |
16 | chr22:23192808..23196826-chr22:23225644..23227911,5 | K562 | blood: | |
17 | chr22:23237287..23240210-chr22:23254703..23257164,2 | K562 | blood: | |
18 | chr22:23062316..23063283-chr22:23225816..23226768,5 | K562 | blood: | |
19 | chr22:22785953..22786488-chr22:23225806..23226411,2 | K562 | blood: | |
20 | chr22:23249849..23250456-chr22:23284637..23285518,2 | K562 | blood: | |
21 | chr22:23219235..23219863-chr22:23270722..23271390,2 | K562 | blood: | |
22 | chr22:23221267..23223203-chr22:23236416..23239424,3 | K562 | blood: | |
23 | chr22:23225847..23226777-chr22:23297600..23298339,3 | K562 | blood: | |
24 | chr22:23246871..23249530-chr22:23253643..23256082,2 | K562 | blood: | |
25 | chr22:23231973..23234722-chr22:23268972..23271345,2 | MCF-7 | breast: | |
26 | chr22:23219728..23223013-chr22:23223632..23226175,4 | K562 | blood: | |
27 | chr22:23248970..23251030-chr22:23266059..23268328,2 | K562 | blood: | |
28 | chr22:23261117..23263641-chr22:23264707..23267231,3 | K562 | blood: | |
29 | chr22:23029760..23030722-chr22:23225908..23226768,3 | K562 | blood: | |
30 | chr22:23269604..23273139-chr22:23273414..23276481,4 | K562 | blood: | |
31 | chr22:23230851..23232657-chr22:23258084..23260097,2 | K562 | blood: | |
32 | chr22:23212457..23213190-chr22:23224646..23225546,2 | K562 | blood: | |
33 | chr22:23190687..23191337-chr22:23223552..23224057,2 | K562 | blood: | |
34 | chr22:23054239..23055029-chr22:23225832..23226341,2 | K562 | blood: | |
35 | chr22:23225783..23226678-chr22:23297796..23299190,3 | MCF-7 | breast: | |
36 | chr22:23226023..23226801-chr22:23284702..23285609,3 | MCF-7 | breast: | |
37 | chr22:23151728..23153719-chr22:23225682..23227093,23 | K562 | blood: | |
38 | chr22:23176262..23178458-chr22:23233013..23234828,2 | K562 | blood: | |
39 | chr22:23271545..23273567-chr22:23289644..23291552,2 | K562 | blood: | |
40 | chr22:23203006..23203931-chr22:23230116..23230981,2 | K562 | blood: | |
41 | chr22:23190306..23191721-chr22:23225246..23226597,7 | MCF-7 | breast: | |
42 | chr22:23196132..23197336-chr22:23225306..23226816,4 | K562 | blood: | |
43 | chr22:22815066..22815979-chr22:23225208..23226122,2 | K562 | blood: | |
44 | chr22:23157854..23159575-chr22:23265576..23269716,3 | K562 | blood: | |
45 | chr22:23144541..23145485-chr22:23225200..23227241,8 | K562 | blood: | |
46 | chr22:23249788..23251920-chr22:23270655..23273406,3 | K562 | blood: | |
47 | chr22:23221668..23222214-chr22:23295526..23296047,2 | MCF-7 | breast: | |
48 | chr22:23197409..23198941-chr22:23225846..23227235,10 | K562 | blood: | |
49 | chr22:23266292..23268666-chr22:23279796..23283281,3 | K562 | blood: | |
50 | chr22:23087878..23088754-chr22:23225788..23226383,4 | K562 | blood: |
(count:10 , 50 per page) page:
1
No. | lncRNA name | Chromosome Location | lncRNA alias |
---|---|---|---|
1 | lnc-RTDR1-4 | chr22:23262147-23262154 | NONHSAT083834 |
2 | lnc-RTDR1-4 | chr22:23264978-23265153 | NONHSAT083834 |
3 | lnc-RTDR1-1 | chr22:23248506-23248831 | NONHSAT083775 |
4 | lnc-RTDR1-4 | chr22:23242926-23243073 | NONHSAT083834 |
5 | lnc-RTDR1-4 | chr22:23243491-23243570 | NONHSAT083834 |
6 | lnc-D87017.1-2 | chr22:23257805-23258097 | NONHSAT083836 |
7 | lnc-D87017.1-3 | chr22:23252998-23253245 | NONHSAT083835 |
8 | lnc-RTDR1-4 | chr22:23261700-23261973 | NONHSAT083834 |
9 | lnc-RTDR1-4 | chr22:23243305-23243327 | NONHSAT083834 |
10 | lnc-RTDR1-4 | chr22:23264861-23264965 | NONHSAT083834 |
miRNA name | Chromosome Location | mirBase accession |
---|---|---|
hsa-miR-5571-5p | chr22:23228471-23228491 | MIMAT0022257 |
hsa-miR-5571-3p | chr22:23228511-23228529 | MIMAT0022258 |
No data |
Variant related genes | Relation type |
---|---|
ENSG00000264824 | TF binding region |
IGLJ5 | TF binding region |
IGLC7 | TF binding region |
IGLJ7 | TF binding region |
IGLC1 | TF binding region |
IGLJ6 | TF binding region |
IGLJ2 | TF binding region |
IGLJ1 | TF binding region |
IGLJ4 | TF binding region |
IGLC4 | TF binding region |
IGLC5 | TF binding region |
IGLL5 | TF binding region |
IGLJ3 | TF binding region |
IGLC3 | TF binding region |
IGLC6 | TF binding region |
IGLV3-1 | TF binding region |
IGLC2 | TF binding region |
ENSG00000223999 | chromatin interactions |
ENSG00000211680 | chromatin interactions |
ENSG00000254030 | chromatin interactions |
ENSG00000211657 | chromatin interactions |
ENSG00000226420 | chromatin interactions |
ENSG00000211673 | chromatin interactions |
ENSG00000211679 | chromatin interactions |
ENSG00000211672 | chromatin interactions |
ENSG00000253234 | chromatin interactions |
ENSG00000211681 | chromatin interactions |
ENSG00000211676 | chromatin interactions |
ENSG00000211655 | chromatin interactions |
ENSG00000211682 | chromatin interactions |
ENSG00000211675 | chromatin interactions |
ENSG00000211685 | chromatin interactions |
ENSG00000237127 | chromatin interactions |
ENSG00000211678 | chromatin interactions |
ENSG00000211663 | chromatin interactions |
ENSG00000211674 | chromatin interactions |
ENSG00000207832 | chromatin interactions |
ENSG00000222037 | chromatin interactions |
ENSG00000211684 | chromatin interactions |
ENSG00000211677 | chromatin interactions |
ENSG00000253963 | chromatin interactions |
ENSG00000254029 | chromatin interactions |
No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs13055946 | chr22:23221869-23221870 | Enhancers Weak transcription | TF binding regionChromatin interactive region | 4 gene(s) | LD-proxies of rSNPOverlapped rCNV | n/a |
2 | rs550543142 | chr22:23221877-23221878 | Enhancers Weak transcription | TF binding regionChromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
3 | rs111347384 | chr22:23221900-23221901 | Enhancers Weak transcription | TF binding regionChromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
4 | rs146214910 | chr22:23221904-23221905 | Enhancers Weak transcription | TF binding regionChromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
5 | rs139659256 | chr22:23221981-23221982 | Enhancers Weak transcription | TF binding regionChromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
6 | rs543623358 | chr22:23222019-23222020 | Enhancers Weak transcription | TF binding regionChromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
7 | rs563436245 | chr22:23222050-23222051 | Enhancers Weak transcription | TF binding regionChromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
8 | rs180897693 | chr22:23222112-23222113 | Enhancers Weak transcription | TF binding regionChromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
9 | rs573902899 | chr22:23222114-23222115 | Enhancers Weak transcription | TF binding regionChromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
10 | rs542860689 | chr22:23222157-23222158 | Enhancers Weak transcription | TF binding regionChromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
11 | rs559396580 | chr22:23222202-23222203 | Enhancers Weak transcription | TF binding regionChromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
12 | rs383391 | chr22:23222208-23222209 | Enhancers Weak transcription | TF binding regionChromatin interactive region | 4 gene(s) | LD-proxies of rSNPOverlapped rCNV | n/a |
13 | rs369928488 | chr22:23222244-23222245 | Enhancers Weak transcription | TF binding regionChromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
14 | rs551118761 | chr22:23222260-23222261 | Enhancers Weak transcription | TF binding regionChromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
15 | rs564624595 | chr22:23222269-23222270 | Enhancers Weak transcription | TF binding regionChromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
16 | rs530487699 | chr22:23222273-23222274 | Enhancers Weak transcription | TF binding regionChromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
17 | rs550284418 | chr22:23222286-23222287 | Enhancers Weak transcription | TF binding regionChromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
18 | rs186431415 | chr22:23222290-23222291 | Enhancers Weak transcription | TF binding regionChromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
19 | rs535683459 | chr22:23222293-23222294 | Enhancers Weak transcription | TF binding regionChromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
20 | rs114759555 | chr22:23222305-23222306 | Enhancers Weak transcription | TF binding regionChromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
21 | rs189370058 | chr22:23222315-23222316 | Enhancers Weak transcription | TF binding regionChromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
22 | rs566294073 | chr22:23222331-23222332 | Enhancers Weak transcription | TF binding regionChromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
23 | rs534993539 | chr22:23222389-23222390 | Enhancers Weak transcription | TF binding regionChromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
24 | rs558215453 | chr22:23222392-23222393 | Enhancers Weak transcription | TF binding regionChromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
25 | rs578080015 | chr22:23222407-23222408 | Enhancers Weak transcription | TF binding regionChromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
26 | rs537511748 | chr22:23222410-23222411 | Enhancers Weak transcription | TF binding regionChromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
27 | rs557493690 | chr22:23222416-23222417 | Enhancers Weak transcription | TF binding regionChromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
28 | rs573839342 | chr22:23222426-23222427 | Enhancers Weak transcription | TF binding regionChromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
29 | rs542496815 | chr22:23222427-23222428 | Enhancers Weak transcription | TF binding regionChromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
30 | rs559594831 | chr22:23222428-23222429 | Enhancers Weak transcription | TF binding regionChromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
31 | rs573090084 | chr22:23222429-23222430 | Enhancers Weak transcription | TF binding regionChromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
32 | rs181733583 | chr22:23222431-23222432 | Enhancers Weak transcription | TF binding regionChromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
33 | rs564511535 | chr22:23222444-23222445 | Enhancers Weak transcription | TF binding regionChromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
34 | rs530427876 | chr22:23222445-23222446 | Enhancers Weak transcription | TF binding regionChromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
35 | rs144434495 | chr22:23222453-23222454 | Enhancers Weak transcription | TF binding regionChromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
36 | rs560693538 | chr22:23222469-23222470 | Enhancers Weak transcription | TF binding regionChromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
37 | rs529487677 | chr22:23222484-23222485 | Enhancers Weak transcription | TF binding regionChromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
38 | rs444812 | chr22:23222486-23222487 | Enhancers Weak transcription | TF binding regionChromatin interactive region | 4 gene(s) | LD-proxies of rSNPOverlapped rCNV | n/a |
39 | rs566344985 | chr22:23222561-23222562 | Enhancers Weak transcription | TF binding regionChromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
40 | rs146146054 | chr22:23222562-23222563 | Enhancers Weak transcription | TF binding regionChromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
41 | rs552121844 | chr22:23222587-23222588 | Enhancers Weak transcription | TF binding regionChromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
42 | rs185956490 | chr22:23222605-23222606 | Enhancers Weak transcription | TF binding regionChromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
43 | rs56891590 | chr22:23222611-23222612 | Enhancers Weak transcription | TF binding regionChromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
44 | rs537451847 | chr22:23222675-23222676 | Enhancers Weak transcription | TF binding regionChromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
45 | rs5759499 | chr22:23222677-23222678 | Enhancers Weak transcription | TF binding regionChromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
46 | rs528635577 | chr22:23222680-23222681 | Enhancers Weak transcription | TF binding regionChromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
47 | rs557479684 | chr22:23222681-23222682 | Enhancers Weak transcription | TF binding regionChromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
48 | rs148809731 | chr22:23222694-23222695 | Enhancers Weak transcription | TF binding regionChromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
49 | rs538218522 | chr22:23222715-23222716 | Enhancers Weak transcription | TF binding regionChromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
50 | rs536433202 | chr22:23222727-23222728 | Enhancers Weak transcription | TF binding regionChromatin interactive region | 4 gene(s) | Overlapped CNVs | n/a |
Disease | PMID | Source |
---|---|---|
Hodgkin''s lymphoma | 18641027 | CNVD |
Acute lymphoblastic leukemia | 22237106 | CNVD |
Esophageal squamous carcinoma | 21637470 | CNVD |
Glioblastoma multiforme | 21080181 | CNVD |
Velocardiofacial syndrome | 20111667 | CNVD |
Medulloblastoma | 21979893 | CNVD |
sporadic solitary meningiomas | 19589153 | CNVD |
Myofibroblastic sarcoma | 19369631 | CNVD |
Autism | 22495311 | CNVD |
Emanuel syndrome | 21549014 | CNVD |
Digeorge syndrome | 22283845 | CNVD |
Schizophrenia | 17504246 | CNVD |
Digeorge syndrome | 18033723 | CNVD |
22q11 deletion syndrome | 17034021 | CNVD |
22q11 deletion syndrome | 22511897 | CNVD |
22q11 deletion syndrome | 16829213 | CNVD |
Autism | 22067053 | CNVD |
Autism | 19218893 | CNVD |
Biliary cancer | 22067053 | CNVD |
Congenital heart defect | 21390462 | CNVD |
Digeorge syndrome | 16617304 | CNVD |
Emanuel syndrome | 18184694 | CNVD |
Non-syndromic sensorineural hearing loss | 18184694 | CNVD |
Obsessive-compulsive disorder | 22067053 | CNVD |
Psychosis | 22067053 | CNVD |
Schizophrenia | 19415332 | CNVD |
Schizophrenia | 20587603 | CNVD |
Shprintzen syndrome | 19443537 | CNVD |
absent pulmonary valve syndrome | 16795129 | CNVD |
language delay | 22067053 | CNVD |
periventricular nodular heterotopia | 20648244 | CNVD |
renal disease | 17924346 | CNVD |
Schizophrenia | 20433910 | CNVD |
22q11 deletion syndrome | 17028864 | CNVD |
Schizophrenia | 16969581 | CNVD |
Non-syndromic sensorineural hearing loss | 17135275 | CNVD |
velo-cardio-facial syndrome | 17135275 | CNVD |
Digeorge syndrome | 18787571 | CNVD |
Autism | 18925931 | CNVD |
Non-small cell lung cancer | 21829676 | CNVD |
22q11.2 microdeletion syndrome | 21547621 | CNVD |
Congenital heart defect | 21308838 | CNVD |
Digeorge syndrome | 16512914 | CNVD |
Digeorge syndrome | 20954168 | CNVD |
Nuchal translucency | 21837766 | CNVD |
Right aortic arch in the fetus | 17066500 | CNVD |
Shprintzen syndrome | 17117043 | CNVD |
Tetralogy of fallot | 17405110 | CNVD |
Velocardiofacial syndrome | 20140301 | CNVD |
Velocardiofacial syndrome | 16512914 | CNVD |
bone mass and metabolism | 20516202 | CNVD |
choanal atresia | 18209138 | CNVD |
extracardiac malformations | 17086578 | CNVD |
fetal heart defects | 21308838 | CNVD |
parathyroid gland dysfunction | 16793949 | CNVD |
prenatal diagnosis | 20453657 | CNVD |
velopharyngeal insufficiency | 19620585 | CNVD |
Prader-willi syndrome | 20942916 | CNVD |
22q11 deletion syndrome | 17653112 | CNVD |
Chronic myelomonocytic leukemia | 16760666 | CNVD |
Non-syndromic sensorineural hearing loss | 16829213 | CNVD |
Non-syndromic sensorineural hearing loss | 16760666 | CNVD |
Chordoma | 21602918 | CNVD |
Cancer | 21637783 | CNVD |
Non-syndromic sensorineural hearing loss | 18471307 | CNVD |
Splenic marginal zone lymphoma | 21957467 | CNVD |
Congenital heart defect | 22511896 | CNVD |
Breast cancer | 17603634 | CNVD |
Endometrial cancer | 22040021 | CNVD |
Burkitt''s lymphoma | 18698080 | CNVD |
Acute myeloid leukemia | 16864856 | CNVD |
Astrocytoma | 17387387 | CNVD |
Breast cancer | 21264507 | CNVD |
Glioblastoma multiforme | 17387387 | CNVD |
Seminomas | 18059402 | CNVD |
Cancer | 16751803 | CNVD |
Metanephric adenoma | 20802469 | CNVD |
T-cell prolymphocytic leukemia | 19278963 | CNVD |
Chronic lymphocytic leukemia | 21546498 | CNVD |
Colorectal cancer | 19359472 | CNVD |
Metachromatic leukodystrophy | 18421352 | CNVD |
Basal cell lymphoma | 17170743 | CNVD |
Gastrointestinal stromal cancer | 19259404 | CNVD |
Gastrointestinal stromal cancer | 20470368 | CNVD |
Gastrointestinal stromal cancer | 17535989 | CNVD |
Paraganglioma | 17535989 | CNVD |
Pulmonary chondroma | 17535989 | CNVD |
Breast cancer | 21858162 | CNVD |
Myelodysplastic syndrome | 21251322 | CNVD |
Acute myeloid leukemia | 20729466 | CNVD |
Breast cancer | 21509527 | CNVD |
Hodgkin''s lymphoma | 17606441 | CNVD |
Cat eye syndrome | 21549014 | CNVD |
Digeorge syndrome | 21549014 | CNVD |
22q11.2 microdeletion syndrome | 22051516 | CNVD |
22q11.2 microdeletion syndrome | 18483005 | CNVD |
22q11.2 microdeletion syndrome | 19565140 | CNVD |
22q11.2 microdeletion syndrome | 20396437 | CNVD |
22q11.2 microdeletion syndrome | 21390462 | CNVD |
22q11.2 microdeletion syndrome | 21573985 | CNVD |
Austim spectrum disorder | 21302340 | CNVD |
Autism | 20970697 | CNVD |
Bipolar disorder | 19114987 | CNVD |
Congenital heart defect | 21257016 | CNVD |
Developmental delay | 18414209 | CNVD |
DiGeorge-Velo cardiofacial | 19284877 | CNVD |
Epilepsy | 20970697 | CNVD |
Heart disease | 20551144 | CNVD |
Hughes'' syndrome | 16595601 | CNVD |
Mental retardation | 18414209 | CNVD |
Okamoto syndrome | 19046188 | CNVD |
Primary immunodeficiency | 22566803 | CNVD |
Schizophrenia | 20877625 | CNVD |
Schizophrenia | 20553308 | CNVD |
Schizophrenia | 21956041 | CNVD |
Schizophrenia | 20970697 | CNVD |
Tetralogy of Fallot | 22912587 | CNVD |
Velocardiofacial syndrome | 17556857 | CNVD |
Velocardiofacial syndrome | 20206275 | CNVD |
Velocardiofacial syndrome | 20970697 | CNVD |
delayed speech development | 21274400 | CNVD |
velo-cardio-facial syndrome | 16511839 | CNVD |
velo-cardio-facial syndrome | 21763005 | CNVD |
22q11.2 microdeletion syndrome | 18799940 | CNVD |
Digeorge syndrome | 20877625 | CNVD |
22q11.2 microdeletion syndrome | 18923514 | CNVD |
Congenital heart defect | 22185286 | CNVD |
DiGeorge-Velo cardiofacial | 16773131 | CNVD |
Digeorge syndrome | 20186050 | CNVD |
velo-cardio-facial conotruncal-face syndrome | 20186050 | CNVD |
22q11.2 microdeletion syndrome | 22116936 | CNVD |
Disorders of sex development | 22290220 | CNVD |
22q11.2 duplication syndrome | 18923514 | CNVD |
Autism | 22095694 | CNVD |
Mental retardation | 19951919 | CNVD |
Honadal dysgenesis | 21048976 | CNVD |
Mental retardation | 16773131 | CNVD |
22q11.2 microdeletion syndrome | 22395003 | CNVD |
22q11.2 microdeletion syndrome | 18691436 | CNVD |
22q11.2 microdeletion syndrome | 18053182 | CNVD |
22q11.2 microdeletion syndrome | 18324686 | CNVD |
22q11.2 microdeletion syndrome | 20074913 | CNVD |
Congenital heart defect | 20802965 | CNVD |
Congenital heart defect | 21134246 | CNVD |
DiGeorge syndrome | 19040613 | CNVD |
DiGeorge-Velo cardiofacial | 18179902 | CNVD |
Digeorge syndrome | 18172682 | CNVD |
Digeorge syndrome | 22470819 | CNVD |
Digeorge syndrome | 21364285 | CNVD |
Neuroendocrine carcinoma | 22470819 | CNVD |
Non-syndromic sensorineural hearing loss | 20069674 | CNVD |
Smith-Magenis syndrome | 18301319 | CNVD |
Tetralogy of fallot | 19144126 | CNVD |
Velo-cardio-facial syndrome | 21364285 | CNVD |
Velocardiofacial syndrome | 18788013 | CNVD |
cardiac malformation | 20573211 | CNVD |
cardiac malformation | 18172682 | CNVD |
velo-cardio-facial syndrome | 18636631 | CNVD |
Schizophrenia | 21822266 | CNVD |
synaptic plasticity | 21368174 | CNVD |
Schizophrenia | 18043741 | CNVD |
sporadic birth defects | 19047251 | CNVD |
Autism | 19046189 | CNVD |
DiGeorge-Velo cardiofacial | 19047251 | CNVD |
Hypernasal speech | 21968682 | CNVD |
Mental retardation | 17339581 | CNVD |
diverse phenotype | 16760730 | CNVD |
Mental retardation | 20152051 | CNVD |
Breast cancer | 16608533 | CNVD |
Melanoma | 18172304 | CNVD |
Ovarian cancer | 22174824 | CNVD |
T-cell prolymphocytic leukemia | 17713554 | CNVD |
Wilms tumour | 21544195 | CNVD |
Acute myeloid leukemia | 21251322 | CNVD |
DiGeorge-Velo cardiofacial | 17597781 | CNVD |
Digeorge syndrome | 17576883 | CNVD |
Schizophrenia | 18806272 | CNVD |
Schizophrenia | 18990708 | CNVD |
Velocardiofacial syndrome | 17576883 | CNVD |
Schizophrenia | 20075378 | CNVD |
Neurodevelopmental disorder | 17015230 | CNVD |
Neuropsychiatric disorder | 20069037 | CNVD |
Williams-beuren syndrome | 18553513 | CNVD |
Emphysema | 19352772 | CNVD |
Cancer | 17440070 | CNVD |
Endometrioid adenocarcinoma | 16974079 | CNVD |
Disease | 21346257 | CNVD |
Breast cancer | 20668451 | CNVD |
Cancer | 20668451 | CNVD |
Lung cancer | 20668451 | CNVD |
Ovarian cancer | 20668451 | CNVD |
Pancreas cancer | 20668451 | CNVD |
Prostate cancer | 20668451 | CNVD |
low-grade B-cell lymphoma tumor | 18367492 | CNVD |
Developmental delay | 21147756 | CNVD |
Cutaneous T-cell lymphoma | 21881587 | CNVD |
Myelofibrosis | 22110671 | CNVD |
Asthma | 21956041 | CNVD |
Glioblastoma multiforme | 22286061 | CNVD |
Colorectal cancer | 21128281 | CNVD |
Systemic lupus erythematosus | 21956041 | CNVD |
Primary central nervous system lymphoma | 21088137 | CNVD |
22q11.23 microdeletion syndrome | 19193630 | CNVD |
Acute lymphoblastic leukemia | 21248843 | CNVD |
Chronic myeloid leukemia | 21384125 | CNVD |
Autism | 20841430 | CNVD |
Multiple myeloma | 17550852 | CNVD |
Breast cancer | 21785460 | CNVD |
Medullary thyroid carcinoma | 18765511 | CNVD |
Lung cancer | 18438408 | CNVD |
small cell lung cancer | 20016488 | CNVD |
Ependymoma | 20639864 | CNVD |
Pancreatic cancer | 17952125 | CNVD |
Cancer | 20164919 | CNVD |
Breast cancer | 22522925 | CNVD |
Schizophrenia | 17989066 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr22:23219600-23227000 | Enhancers | Primary B cells from peripheral blood | blood |
2 | chr22:23219800-23224800 | Enhancers | Thymus | Thymus |
3 | chr22:23219800-23228200 | Enhancers | Fetal Thymus | thymus |
4 | chr22:23220000-23223200 | Weak transcription | Right Atrium | heart |
5 | chr22:23221200-23226800 | Enhancers | Dnd41 | blood |
6 | chr22:23221800-23227400 | Enhancers | Primary B cells from cord blood | blood |
7 | chr22:23221800-23227800 | Enhancers | Primary Natural Killer cells fromperipheralblood | blood |
8 | chr22:23223000-23223600 | Bivalent Enhancer | Fetal Muscle Trunk | muscle |
9 | chr22:23223000-23225000 | Enhancers | Spleen | Spleen |
10 | chr22:23223000-23225200 | Enhancers | Monocytes-CD14+_RO01746 | blood |
11 | chr22:23223200-23223600 | Enhancers | Primary mononuclear cells fromperipheralblood | Blood |
12 | chr22:23223200-23223800 | Strong transcription | Right Atrium | heart |
13 | chr22:23223400-23223600 | Bivalent Enhancer | Stomach Smooth Muscle | stomach |
14 | chr22:23223400-23226800 | Enhancers | Primary monocytes fromperipheralblood | blood |
15 | chr22:23223600-23224600 | Weak transcription | Primary mononuclear cells fromperipheralblood | Blood |
16 | chr22:23223800-23224800 | Bivalent Enhancer | Fetal Stomach | stomach |
17 | chr22:23223800-23226200 | Weak transcription | Right Atrium | heart |
18 | chr22:23224400-23224600 | Bivalent Enhancer | Foreskin Fibroblast Primary Cells skin02 | Skin |
19 | chr22:23224400-23224600 | Bivalent Enhancer | Fetal Muscle Trunk | muscle |
20 | chr22:23224600-23224800 | Enhancers | Primary mononuclear cells fromperipheralblood | Blood |
21 | chr22:23224800-23225600 | Weak transcription | Thymus | Thymus |
22 | chr22:23225000-23231000 | Weak transcription | Spleen | Spleen |
23 | chr22:23225200-23225600 | Weak transcription | Monocytes-CD14+_RO01746 | blood |
24 | chr22:23225600-23226800 | Enhancers | Monocytes-CD14+_RO01746 | blood |
25 | chr22:23225600-23227200 | Enhancers | Thymus | Thymus |
26 | chr22:23226200-23227400 | Bivalent Enhancer | Primary T cells fromperipheralblood | blood |
27 | chr22:23226200-23227600 | Enhancers | Fetal Muscle Leg | muscle |
28 | chr22:23226200-23227800 | Strong transcription | Right Atrium | heart |
29 | chr22:23226400-23227200 | Enhancers | Duodenum Mucosa | Duodenum |
30 | chr22:23226600-23226800 | Bivalent Enhancer | Stomach Smooth Muscle | stomach |
31 | chr22:23226600-23227000 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
32 | chr22:23226600-23227200 | Enhancers | Primary T helper cells fromperipheralblood | blood |
33 | chr22:23226600-23227200 | Enhancers | GM12878-XiMat | blood |
34 | chr22:23226600-23227600 | Bivalent Enhancer | Fetal Muscle Trunk | muscle |
35 | chr22:23226600-23227800 | Enhancers | HSMMtube | muscle |
36 | chr22:23226800-23227000 | Enhancers | Rectal Mucosa Donor 29 | rectum |
37 | chr22:23226800-23227200 | Flanking Active TSS | Dnd41 | blood |
38 | chr22:23226800-23227200 | Enhancers | HSMM | muscle |
39 | chr22:23226800-23228000 | Enhancers | Primary hematopoietic stem cells | blood |
40 | chr22:23227000-23227600 | Enhancers | Primary T cells from cord blood | blood |
41 | chr22:23227000-23227800 | Flanking Active TSS | Primary B cells from peripheral blood | blood |
42 | chr22:23227200-23227400 | Bivalent Enhancer | Primary T helper 17 cells PMA-I stimulated | -- |
43 | chr22:23227200-23227400 | Flanking Active TSS | Thymus | Thymus |
44 | chr22:23227200-23227600 | Enhancers | Dnd41 | blood |
45 | chr22:23227200-23230000 | Weak transcription | Duodenum Mucosa | Duodenum |
46 | chr22:23227400-23228000 | Enhancers | Thymus | Thymus |
47 | chr22:23227400-23228400 | Flanking Active TSS | Primary B cells from cord blood | blood |
48 | chr22:23227600-23228200 | Flanking Active TSS | Dnd41 | blood |
49 | chr22:23227800-23228600 | Weak transcription | Right Atrium | heart |
50 | chr22:23227800-23229200 | Enhancers | Primary B cells from peripheral blood | blood |