Variant report

Variant	nsv1066132
Chromosome Location	chr16:82769526-82847359
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	BATF	chr16:82835024-82835307	GM12878	blood:	n/a	n/a
2	BATF	chr16:82834943-82835371	GM12878	blood:	n/a	n/a
3	BATF	chr16:82769541-82769852	GM12878	blood:	n/a	n/a
4	BCL3	chr16:82819586-82819857	GM12878	blood:	n/a	n/a
5	BCL3	chr16:82769485-82769826	GM12878	blood:	n/a	n/a
6	BHLHE40	chr16:82769364-82769831	GM12878	blood:	n/a	n/a
7	CEBPB	chr16:82810463-82810760	A549	lung:	n/a	chr16:82810606-82810617
8	CEBPB	chr16:82794786-82795354	IMR90	lung:	n/a	chr16:82795159-82795172
9	CEBPB	chr16:82773333-82773604	HepG2	liver:	n/a	chr16:82773444-82773453 chr16:82773443-82773454 chr16:82773442-82773455 chr16:82773442-82773453
10	CEBPB	chr16:82794905-82795256	A549	lung:	n/a	chr16:82795159-82795172
11	CEBPB	chr16:82794930-82795257	Hela-S3	cervix:	n/a	chr16:82795159-82795172
12	CEBPB	chr16:82810502-82810653	K562	blood:	n/a	chr16:82810606-82810617
13	CEBPB	chr16:82793367-82793845	IMR90	lung:	n/a	chr16:82793383-82793394 chr16:82793699-82793710
14	CEBPB	chr16:82773312-82773624	IMR90	lung:	n/a	chr16:82773444-82773453 chr16:82773443-82773454 chr16:82773442-82773455 chr16:82773442-82773453
15	CEBPB	chr16:82816457-82816749	H1-hESC	embryonic stem cell:	n/a	chr16:82816601-82816612
16	CEBPB	chr16:82793574-82793858	HepG2	liver:	n/a	chr16:82793699-82793710
17	CEBPB	chr16:82795055-82795275	H1-hESC	embryonic stem cell:	n/a	chr16:82795159-82795172
18	CEBPB	chr16:82793698-82793750	K562	blood:	n/a	chr16:82793699-82793710
19	CEBPB	chr16:82827669-82827721	H1-hESC	embryonic stem cell:	n/a	n/a
20	CEBPB	chr16:82806146-82806407	IMR90	lung:	n/a	chr16:82806277-82806288
21	CEBPB	chr16:82810451-82810782	IMR90	lung:	n/a	chr16:82810606-82810617
22	CEBPB	chr16:82810428-82810778	HepG2	liver:	n/a	chr16:82810606-82810617
23	CEBPB	chr16:82781701-82782011	IMR90	lung:	n/a	n/a
24	CEBPB	chr16:82806159-82806390	HepG2	liver:	n/a	chr16:82806277-82806288
25	CTCF	chr16:82781780-82781930	SAEC	small airway:	n/a	chr16:82781890-82781911
26	CTCF	chr16:82789140-82789290	NHDF-neo	bronchial:	n/a	n/a
27	CTCF	chr16:82829760-82829910	AG04449	skin:	n/a	n/a
28	CTCF	chr16:82772380-82772530	HUVEC	blood vessel:	n/a	chr16:82772478-82772499 chr16:82772483-82772501 chr16:82772489-82772498
29	CTCF	chr16:82781600-82781750	HRE	kidney:	n/a	n/a
30	CTCF	chr16:82789280-82789430	HA-sp	spinal cord:	n/a	chr16:82789374-82789381
31	CTCF	chr16:82831920-82832070	HRPEpiC	eye:	n/a	n/a
32	CTCF	chr16:82772420-82772570	HUVEC	blood vessel:	n/a	chr16:82772478-82772499 chr16:82772483-82772501 chr16:82772489-82772498
33	CTCF	chr16:82789340-82789490	HA-sp	spinal cord:	n/a	chr16:82789374-82789381
34	CTCF	chr16:82835100-82835250	AG09309	skin:	n/a	n/a
35	CTCF	chr16:82781840-82781990	AG09319	gingival:	n/a	chr16:82781890-82781911
36	CTCF	chr16:82772438-82772562	GM10248	blood:	n/a	chr16:82772478-82772499 chr16:82772483-82772501 chr16:82772489-82772498
37	CTCF	chr16:82789300-82789450	HVMF	connective:	n/a	chr16:82789374-82789381
38	CTCF	chr16:82789260-82789410	HRE	kidney:	n/a	chr16:82789374-82789381
39	CTCF	chr16:82829825-82829872	IMR90	lung:	n/a	n/a
40	CTCF	chr16:82772469-82772548	GM12892	blood:	n/a	chr16:82772478-82772499 chr16:82772483-82772501 chr16:82772489-82772498
41	CTCF	chr16:82829780-82829930	NHEK	skin:	n/a	n/a
42	CTCF	chr16:82772420-82772570	HPF	lung:	n/a	chr16:82772478-82772499 chr16:82772483-82772501 chr16:82772489-82772498
43	CTCF	chr16:82781800-82781950	HCPEpiC	choroid plexus:	n/a	chr16:82781890-82781911
44	CTCF	chr16:82789360-82789510	NHEK	skin:	n/a	chr16:82789374-82789381
45	CTCF	chr16:82789240-82789390	HCT-116	colon:	n/a	chr16:82789374-82789381
46	CTCF	chr16:82781760-82781910	HEEpiC	esophagus:	n/a	n/a
47	CTCF	chr16:82772180-82772330	HRPEpiC	eye:	n/a	n/a
48	CTCF	chr16:82772320-82772470	SK-N-SH_RA	brain:	n/a	n/a
49	CTCF	chr16:82829728-82830031	H1-hESC	embryonic stem cell:	n/a	n/a
50	CTCF	chr16:82772420-82772570	GM12870	blood:	n/a	chr16:82772478-82772499 chr16:82772483-82772501 chr16:82772489-82772498

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr16:82827677-82827727	H1-hESC	embryonic stem cell:	embryo
2	chr16:82827677-82827727	H1-hESC	embryonic stem cell:	embryo
3	chr16:82781365-82781415	AG10803	skin:	n/a
4	chr16:82827677-82827727	NH-A	brain:	n/a
5	chr16:82781365-82781415	GM06990	blood:	n/a
6	chr16:82781365-82781415	T-47D	breast:	n/a
7	chr16:82781365-82781415	SK-N-SH	brain:	n/a
8	chr16:82816457-82816507	PANC-1	pancreas:	n/a
9	chr16:82827677-82827727	HEK293	kidney:	embryo
10	chr16:82827677-82827727	HNPCEpiC	eye:	n/a
11	chr16:82781365-82781415	BE2_C	brain:	n/a
12	chr16:82781365-82781415	HepG2	liver:	n/a
13	chr16:82816457-82816507	PrEC	prostate:	n/a
14	chr16:82827677-82827727	HPAEpiC	pulmonary alveolar:	n/a
15	chr16:82781365-82781415	PrEC	prostate:	n/a
16	chr16:82816457-82816507	NHDF-neo	bronchial:	n/a
17	chr16:82816457-82816507	AG04450	lung:	fetal
18	chr16:82827677-82827727	CMK	blood:	n/a
19	chr16:82816457-82816507	GM19239	blood:	n/a
20	chr16:82781365-82781415	AoSMC	blood vessel:	n/a
21	chr16:82816457-82816507	HNPCEpiC	eye:	n/a
22	chr16:82827677-82827727	AG09309	skin:	n/a
23	chr16:82781365-82781415	HCT-116	colon:	n/a
24	chr16:82816457-82816507	PFSK-1	brain:	n/a
25	chr16:82781365-82781415	K562	blood:	n/a
26	chr16:82827677-82827727	NT2-D1	testis:	n/a
27	chr16:82816457-82816507	AG10803	skin:	n/a
28	chr16:82816457-82816507	HUVEC	blood vessel:	n/a
29	chr16:82827677-82827727	IMR90	lung:	fetal
30	chr16:82781365-82781415	ovcar-3	ovarian:	n/a
31	chr16:82816457-82816507	A549	lung:	n/a
32	chr16:82781365-82781415	NHDF-neo	bronchial:	n/a
33	chr16:82816457-82816507	SK-N-SH_RA	brain:	n/a
34	chr16:82816457-82816507	GM06990	blood:	n/a
35	chr16:82827677-82827727	AG09319	gingival:	n/a
36	chr16:82816457-82816507	NHBE	bronchial:	n/a
37	chr16:82781365-82781415	SK-N-SH_RA	brain:	n/a
38	chr16:82781365-82781415	GM12878	blood:	n/a
39	chr16:82781365-82781415	BJ	skin:	n/a
40	chr16:82781365-82781415	SAEC	small airway:	n/a
41	chr16:82827677-82827727	Jurkat	blood:	n/a
42	chr16:82781365-82781415	PFSK-1	brain:	n/a
43	chr16:82816457-82816507	AG09319	gingival:	n/a
44	chr16:82781365-82781415	MCF10A-Er-Src	breast:	n/a
45	chr16:82827677-82827727	HCT-116	colon:	n/a
46	chr16:82827677-82827727	HMEC	breast:	n/a
47	chr16:82827677-82827727	HRCEpiC	kidney:	n/a
48	chr16:82816457-82816507	GM12878	blood:	n/a
49	chr16:82827677-82827727	MCF10A-Er-Src	breast:	n/a
50	chr16:82816457-82816507	GM12892	blood:	n/a

No.	Distal block	Cell Line	Cell type
1	chr16:82838532..82841265-chr16:82844045..82845845,2	MCF-7	breast:
2	chr16:82784687..82786214-chr16:82787764..82790062,2	K562	blood:
3	chr16:82762397..82764526-chr16:82767820..82769912,2	MCF-7	breast:
4	chr16:82810032..82812890-chr16:82813373..82816205,2	K562	blood:
5	chr16:82800736..82802731-chr16:82823544..82826539,2	K562	blood:
6	chr16:82810032..82812890-chr16:82813373..82816205,2	K562	blood:
7	chr16:82771591..82773606-chr16:82773856..82775987,2	MCF-7	breast:
8	chr16:82784687..82786214-chr16:82787764..82790062,2	K562	blood:
9	chr16:82800736..82802731-chr16:82823544..82826539,2	K562	blood:
10	chr16:82838532..82841265-chr16:82844045..82845845,2	MCF-7	breast:
11	chr16:82771591..82773606-chr16:82773856..82775987,2	MCF-7	breast:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-HSD17B2-2	chr16:82806924-82807094	ENSG00000260862.1

Variant related genes	Relation type
ENSG00000260862	TF binding region
ENSG00000260862	CpG island

Extended variants
information (count: 4718 )
Associated
traits (count: 74 )

Variant overlapped rSNPs/rCNVs (count:4718 , 50 per page) page: 1 2 3 4 5 6 7 ... 95

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs186652156	chr16:82769526-82769527	Weak transcription Enhancers Flanking Active TSS Active TSS	n/a	n/a	Overlapped CNVs	n/a
2	rs114436159	chr16:82769534-82769535	Weak transcription Enhancers Flanking Active TSS Active TSS	n/a	n/a	Overlapped CNVs	n/a
3	rs7189103	chr16:82769541-82769542	Weak transcription Enhancers Flanking Active TSS Active TSS	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
4	rs571361472	chr16:82769542-82769543	Weak transcription Enhancers Flanking Active TSS Active TSS	n/a	n/a	Overlapped CNVs	n/a
5	rs530211452	chr16:82769550-82769551	Weak transcription Enhancers Flanking Active TSS Active TSS	n/a	n/a	Overlapped CNVs	n/a
6	rs538666604	chr16:82769555-82769556	Weak transcription Enhancers Flanking Active TSS Active TSS	n/a	n/a	Overlapped CNVs	n/a
7	rs547763285	chr16:82769570-82769571	Weak transcription Enhancers Flanking Active TSS Active TSS	n/a	n/a	Overlapped CNVs	n/a
8	rs72803995	chr16:82769574-82769575	Weak transcription Enhancers Flanking Active TSS Active TSS	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
9	rs536528539	chr16:82769650-82769651	Weak transcription Enhancers Flanking Active TSS Active TSS	n/a	n/a	Overlapped CNVs	n/a
10	rs116776640	chr16:82769651-82769652	Weak transcription Enhancers Flanking Active TSS Active TSS	n/a	n/a	Overlapped CNVs	n/a
11	rs16958387	chr16:82769664-82769665	Weak transcription Enhancers Flanking Active TSS Active TSS	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
12	rs139180126	chr16:82769682-82769683	Weak transcription Enhancers Flanking Active TSS Active TSS	n/a	n/a	Overlapped CNVs	n/a
13	rs55731405	chr16:82769688-82769689	Weak transcription Enhancers Flanking Active TSS Active TSS	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
14	rs192723896	chr16:82769702-82769703	Weak transcription Enhancers Flanking Active TSS Active TSS	n/a	n/a	Overlapped CNVs	n/a
15	rs184555905	chr16:82769711-82769712	Weak transcription Enhancers Flanking Active TSS Active TSS	n/a	n/a	Overlapped CNVs	n/a
16	rs113896910	chr16:82769719-82769720	Weak transcription Enhancers Flanking Active TSS Active TSS	n/a	n/a	Overlapped CNVs	n/a
17	rs75215808	chr16:82769755-82769756	Weak transcription Enhancers Flanking Active TSS Active TSS	n/a	n/a	Overlapped CNVs	n/a
18	rs542929915	chr16:82769762-82769763	Weak transcription Enhancers Flanking Active TSS Active TSS	n/a	n/a	Overlapped CNVs	n/a
19	rs527896728	chr16:82769778-82769779	Weak transcription Enhancers Flanking Active TSS Active TSS	n/a	n/a	Overlapped CNVs	n/a
20	rs552427103	chr16:82769813-82769814	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
21	rs531792751	chr16:82769822-82769823	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
22	rs374313972	chr16:82769840-82769841	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
23	rs190014251	chr16:82769848-82769849	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
24	rs144974952	chr16:82769859-82769860	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
25	rs181683510	chr16:82769870-82769871	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
26	rs140410125	chr16:82769882-82769883	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
27	rs115044897	chr16:82769932-82769933	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
28	rs184444905	chr16:82769944-82769945	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
29	rs115706038	chr16:82769976-82769977	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
30	rs530011925	chr16:82769980-82769981	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
31	rs571125872	chr16:82769999-82770000	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
32	rs548504389	chr16:82770018-82770019	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
33	rs1462035	chr16:82770031-82770032	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
34	rs537282560	chr16:82770059-82770060	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
35	rs144346655	chr16:82770065-82770066	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
36	rs570481759	chr16:82770069-82770070	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
37	rs189035676	chr16:82770072-82770073	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
38	rs181781391	chr16:82770110-82770111	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
39	rs550540254	chr16:82770113-82770114	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
40	rs570535667	chr16:82770143-82770144	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
41	rs568806387	chr16:82770148-82770149	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
42	rs186306838	chr16:82770158-82770159	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
43	rs189541659	chr16:82770174-82770175	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
44	rs534884620	chr16:82770212-82770213	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
45	rs554737337	chr16:82770215-82770216	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
46	rs147796821	chr16:82770223-82770224	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
47	rs573037587	chr16:82770225-82770226	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
48	rs80262526	chr16:82770227-82770228	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
49	rs543634127	chr16:82770236-82770237	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
50	rs16958392	chr16:82770272-82770273	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a

Variant related diseases (count:74)

Disease	PMID	Source
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	21080181	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Autism	19415332	CNVD
Medulloblastoma	21979893	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Schizophrenia	22958593	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Autism	22495311	CNVD
Wilms tumour	21544195	CNVD
Prostate cancer	18632612	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Breast cancer	17850661	CNVD
Breast cancer	16702952	CNVD
Medulloblastoma	16968546	CNVD
Prostate cancer	19242612	CNVD
Cancer	22429812	CNVD
Ewing''s sarcoma	21437220	CNVD
Ewing''s sarcoma	22429812	CNVD
Melanoma	18172304	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	20837533	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Multiple myeloma	21628407	CNVD
Ovarian cancer	22174824	CNVD
Breast cancer	21858162	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Ewing''s sarcoma	17952124	CNVD
Breast cancer	17001317	CNVD
Breast cancer	17133270	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Breast cancer	17603634	CNVD
Prostate cancer	16573809	CNVD
Prostate cancer	17245344	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Medulloblastoma	16783165	CNVD
Breast cancer	21806811	CNVD
small cell lung cancer	20016488	CNVD
Lung cancer	18438408	CNVD
Hepatocellular carcinoma	16750200	CNVD
Breast cancer	21509527	CNVD
Breast cancer	21364760	CNVD
Ovarian clear cell carcinoma	21343371	CNVD
Autism	21865298	CNVD
Non-small cell lung cancer	21829676	CNVD
Chronic lymphocytic leukemia	22228453	CNVD
Colorectal cancer	16272173	CNVD
Prostate cancer	16461572	CNVD
Melanoma	20688739	CNVD
Myelofibrosis	22110671	CNVD
Alveolar capillary dysplasia	19500772	CNVD
VACTERL syndrome	21315191	CNVD
T-cell lymphomas	19863542	CNVD
Developmental delay	19490664	CNVD
Neuroblastoma	18923191	CNVD
Ovarian cancer	21781307	CNVD
Breast cancer	22522925	CNVD
Adrenocortical carcinoma	18281524	CNVD
Autism	20531469	CNVD
Pancreatic cancer	17952125	CNVD

Chromatin state (count:862 , 50 per page) page: 1 2 3 4 5 6 7 ... 18

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr16:82750200-82780600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
2	chr16:82762000-82773800	Weak transcription	NHEK	skin
3	chr16:82766600-82770600	Enhancers	Aorta	Aorta
4	chr16:82766600-82770600	Enhancers	Left Ventricle	heart
5	chr16:82766800-82788600	Weak transcription	HMEC	breast
6	chr16:82767400-82770800	Enhancers	Fetal Brain Male	brain
7	chr16:82767600-82771000	Enhancers	Fetal Muscle Leg	muscle
8	chr16:82767800-82769600	Enhancers	Right Ventricle	heart
9	chr16:82767800-82771000	Enhancers	Fetal Stomach	stomach
10	chr16:82768000-82771200	Enhancers	Brain Germinal Matrix	brain
11	chr16:82768200-82770200	Enhancers	Fetal Brain Female	brain
12	chr16:82768200-82771000	Enhancers	HSMMtube	muscle
13	chr16:82768400-82769800	Enhancers	Brain Inferior Temporal Lobe	brain
14	chr16:82768400-82771000	Enhancers	Colon Smooth Muscle	Colon
15	chr16:82768600-82769800	Enhancers	Fetal Adrenal Gland	Adrenal Gland
16	chr16:82768600-82769800	Enhancers	HSMM	muscle
17	chr16:82768600-82770000	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
18	chr16:82768600-82770000	Flanking Active TSS	Skeletal Muscle Female	skeletal muscle
19	chr16:82768600-82770200	Enhancers	NHDF-Ad	bronchial
20	chr16:82768600-82770400	Weak transcription	Psoas Muscle	Psoas
21	chr16:82768600-82770800	Enhancers	Rectal Smooth Muscle	rectum
22	chr16:82768600-82773400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
23	chr16:82768600-82775800	Weak transcription	Fetal Muscle Trunk	muscle
24	chr16:82768600-82784800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
25	chr16:82768800-82769600	Enhancers	Brain Angular Gyrus	brain
26	chr16:82768800-82769600	Enhancers	Brain Substantia Nigra	brain
27	chr16:82768800-82770600	Enhancers	Duodenum Smooth Muscle	Duodenum
28	chr16:82768800-82770600	Flanking Active TSS	Stomach Smooth Muscle	stomach
29	chr16:82769000-82769800	Flanking Active TSS	Fetal Heart	heart
30	chr16:82769000-82770000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
31	chr16:82769000-82770600	Enhancers	Primary B cells from peripheral blood	blood
32	chr16:82769200-82769800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
33	chr16:82769200-82769800	Enhancers	NHLF	lung
34	chr16:82769200-82769800	Flanking Active TSS	Osteobl	bone
35	chr16:82769200-82770000	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
36	chr16:82769200-82770200	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
37	chr16:82769200-82770200	Flanking Active TSS	Skeletal Muscle Male	skeletal muscle
38	chr16:82769200-82785200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
39	chr16:82769400-82769800	Active TSS	Brain Hippocampus Middle	brain
40	chr16:82769400-82770000	Flanking Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
41	chr16:82769400-82770200	Enhancers	GM12878-XiMat	blood
42	chr16:82769800-82770000	Enhancers	Brain Hippocampus Middle	brain
43	chr16:82769800-82770000	Enhancers	NH-A	brain
44	chr16:82769800-82770000	Enhancers	Osteobl	bone
45	chr16:82769800-82772000	Enhancers	Fetal Heart	heart
46	chr16:82769800-82774000	Weak transcription	HSMM	muscle
47	chr16:82770000-82770200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
48	chr16:82770000-82770600	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
49	chr16:82770000-82770600	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
50	chr16:82770000-82772000	Enhancers	Skeletal Muscle Female	skeletal muscle

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links