Variant report

Variant	nsv1066231
Chromosome Location	chr19:43918840-43954915
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr19:43936967-43937303	K562	blood:	n/a	n/a
2	ARID3A	chr19:43948815-43949085	K562	blood:	n/a	n/a
3	ARID3A	chr19:43951186-43951527	K562	blood:	n/a	n/a
4	BACH1	chr19:43937068-43937435	K562	blood:	n/a	n/a
5	BACH1	chr19:43951148-43951411	K562	blood:	n/a	n/a
6	BCL3	chr19:43942854-43943565	A549	lung:	n/a	n/a
7	BCL3	chr19:43943124-43943602	A549	lung:	n/a	n/a
8	BHLHE40	chr19:43947828-43948038	K562	blood:	n/a	n/a
9	BHLHE40	chr19:43951076-43951587	K562	blood:	n/a	n/a
10	BHLHE40	chr19:43948832-43949262	K562	blood:	n/a	n/a
11	BHLHE40	chr19:43941474-43941725	K562	blood:	n/a	n/a
12	BHLHE40	chr19:43937017-43937430	K562	blood:	n/a	n/a
13	BHLHE40	chr19:43936863-43937386	GM12878	blood:	n/a	n/a
14	CCNT2	chr19:43948831-43949088	K562	blood:	n/a	n/a
15	CEBPB	chr19:43926853-43927151	HepG2	liver:	n/a	chr19:43926999-43927010
16	CEBPB	chr19:43926815-43927157	K562	blood:	n/a	chr19:43926999-43927010
17	CEBPB	chr19:43926918-43927173	A549	lung:	n/a	chr19:43926999-43927010
18	CEBPB	chr19:43928885-43929232	HepG2	liver:	n/a	chr19:43929097-43929108
19	CEBPB	chr19:43951315-43951649	IMR90	lung:	n/a	n/a
20	CEBPB	chr19:43928882-43929119	IMR90	lung:	n/a	chr19:43929097-43929108
21	CEBPB	chr19:43942346-43943574	Hela-S3	cervix:	n/a	chr19:43943165-43943178 chr19:43943273-43943286
22	CEBPB	chr19:43951272-43951703	H1-hESC	embryonic stem cell:	n/a	n/a
23	CEBPB	chr19:43926854-43927175	IMR90	lung:	n/a	chr19:43926999-43927010
24	CEBPB	chr19:43948301-43949068	K562	blood:	n/a	n/a
25	CEBPB	chr19:43951333-43951649	K562	blood:	n/a	n/a
26	CEBPB	chr19:43933642-43933750	A549	lung:	n/a	n/a
27	CEBPB	chr19:43933433-43933848	K562	blood:	n/a	n/a
28	CEBPB	chr19:43928890-43929216	A549	lung:	n/a	chr19:43929097-43929108
29	CEBPB	chr19:43926858-43927126	Hela-S3	cervix:	n/a	chr19:43926999-43927010
30	CEBPB	chr19:43943332-43943525	A549	lung:	n/a	n/a
31	CEBPB	chr19:43920752-43920932	K562	blood:	n/a	n/a
32	CEBPB	chr19:43928942-43929136	K562	blood:	n/a	chr19:43929097-43929108
33	CEBPB	chr19:43928874-43929095	Hela-S3	cervix:	n/a	n/a
34	CEBPB	chr19:43931758-43932062	HepG2	liver:	n/a	chr19:43931836-43931847 chr19:43931836-43931847
35	CEBPD	chr19:43948671-43949170	K562	blood:	n/a	n/a
36	CHD1	chr19:43951004-43952036	IMR90	lung:	n/a	n/a
37	CHD2	chr19:43951158-43951472	K562	blood:	n/a	n/a
38	CHD2	chr19:43951103-43951495	H1-hESC	embryonic stem cell:	n/a	n/a
39	CTCF	chr19:43937120-43937270	NHLF	lung:	n/a	chr19:43937197-43937215 chr19:43937200-43937213 chr19:43937199-43937220
40	CTCF	chr19:43951220-43951370	GM12864	blood:	n/a	chr19:43951353-43951366 chr19:43951350-43951368 chr19:43951351-43951367 chr19:43951353-43951366
41	CTCF	chr19:43929873-43930123	Gliobla	brain:	n/a	n/a
42	CTCF	chr19:43936961-43937411	K562	blood:	n/a	chr19:43937197-43937215 chr19:43937200-43937213 chr19:43937199-43937220
43	CTCF	chr19:43934360-43934510	AG04450	lung:	n/a	chr19:43934361-43934370
44	CTCF	chr19:43937140-43937290	GM12872	blood:	n/a	chr19:43937197-43937215 chr19:43937200-43937213 chr19:43937199-43937220
45	CTCF	chr19:43934320-43934470	HCPEpiC	choroid plexus:	n/a	chr19:43934357-43934370 chr19:43934361-43934370 chr19:43934355-43934373
46	CTCF	chr19:43937120-43937270	HPAF	blood vessel:	n/a	chr19:43937197-43937215 chr19:43937200-43937213 chr19:43937199-43937220
47	CTCF	chr19:43937120-43937270	HRPEpiC	eye:	n/a	chr19:43937197-43937215 chr19:43937200-43937213 chr19:43937199-43937220
48	CTCF	chr19:43934284-43934422	GM12892	blood:	n/a	chr19:43934357-43934370 chr19:43934361-43934370 chr19:43934355-43934373
49	CTCF	chr19:43951320-43951470	K562	blood:	n/a	chr19:43951353-43951366 chr19:43951350-43951368 chr19:43951351-43951367 chr19:43951353-43951366
50	CTCF	chr19:43951280-43951430	HPAF	blood vessel:	n/a	chr19:43951353-43951366 chr19:43951350-43951368 chr19:43951351-43951367 chr19:43951353-43951366

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr19:43919028-43919078	PFSK-1	brain:	n/a
2	chr19:43919028-43919078	PFSK-1	brain:	n/a
3	chr19:43918882-43918932	ProgFib	skin:	n/a
4	chr19:43919039-43919089	LNCaP	prostate:	n/a
5	chr19:43918882-43918932	AG04450	lung:	fetal
6	chr19:43918882-43918932	HPAEpiC	pulmonary alveolar:	n/a
7	chr19:43918974-43919024	HRCEpiC	kidney:	n/a
8	chr19:43919536-43919586	NH-A	brain:	n/a
9	chr19:43919536-43919586	HEK293	kidney:	embryo
10	chr19:43922332-43922382	HUVEC	blood vessel:	n/a
11	chr19:43918868-43918918	HCF	heart:	n/a
12	chr19:43922723-43922773	HIPEpiC	eye:	n/a
13	chr19:43918868-43918918	Hepatocyte	liver:	n/a
14	chr19:43918882-43918932	HUVEC	blood vessel:	n/a
15	chr19:43918882-43918932	NH-A	brain:	n/a
16	chr19:43919028-43919078	GM12878	blood:	n/a
17	chr19:43919536-43919586	GM19239	blood:	n/a
18	chr19:43918974-43919024	GM19239	blood:	n/a
19	chr19:43918974-43919024	HCPEpiC	choroid plexus:	n/a
20	chr19:43919536-43919586	HMEC	breast:	n/a
21	chr19:43919536-43919586	NT2-D1	testis:	n/a
22	chr19:43919028-43919078	AoSMC	blood vessel:	n/a
23	chr19:43919536-43919586	HNPCEpiC	eye:	n/a
24	chr19:43919536-43919586	HCT-116	colon:	n/a
25	chr19:43919003-43919053	Jurkat	blood:	n/a
26	chr19:43919039-43919089	PFSK-1	brain:	n/a
27	chr19:43922332-43922382	ovcar-3	ovarian:	n/a
28	chr19:43918943-43918993	A549	lung:	n/a
29	chr19:43918943-43918993	HepG2	liver:	n/a
30	chr19:43919028-43919078	SK-N-SH	brain:	n/a
31	chr19:43918943-43918993	NH-A	brain:	n/a
32	chr19:43922723-43922773	ECC-1	luminal epithelium:	n/a
33	chr19:43918974-43919024	Hepatocyte	liver:	n/a
34	chr19:43922723-43922773	MCF-7	breast:	n/a
35	chr19:43918943-43918993	ECC-1	luminal epithelium:	n/a
36	chr19:43919028-43919078	NT2-D1	testis:	n/a
37	chr19:43922723-43922773	NHDF-neo	bronchial:	n/a
38	chr19:43919003-43919053	HNPCEpiC	eye:	n/a
39	chr19:43922332-43922382	HCPEpiC	choroid plexus:	n/a
40	chr19:43922332-43922382	PFSK-1	brain:	n/a
41	chr19:43919028-43919078	T-47D	breast:	n/a
42	chr19:43919039-43919089	PrEC	prostate:	n/a
43	chr19:43918882-43918932	GM12891	blood:	n/a
44	chr19:43919003-43919053	NHDF-neo	bronchial:	n/a
45	chr19:43922332-43922382	A549	lung:	n/a
46	chr19:43919039-43919089	HL-60	blood:	n/a
47	chr19:43919003-43919053	PrEC	prostate:	n/a
48	chr19:43919039-43919089	AG09309	skin:	n/a
49	chr19:43918943-43918993	MCF-7	breast:	n/a
50	chr19:43918974-43919024	MCF-7	breast:	n/a

No.	Distal block	Cell Line	Cell type
1	chr19:43937158..43937719-chr19:44059063..44059904,2	K562	blood:
2	chr19:43928435..43931381-chr19:43932773..43935782,3	K562	blood:
3	chr19:43937232..43939100-chr19:44037778..44039902,2	MCF-7	breast:
4	chr19:43947823..43950572-chr19:43967998..43969717,2	MCF-7	breast:
5	chr19:43950829..43952315-chr19:44023277..44024591,13	MCF-7	breast:
6	chr19:43950949..43953195-chr19:44029676..44031859,2	MCF-7	breast:
7	chr19:43928435..43931381-chr19:43932773..43935782,3	K562	blood:
8	chr19:43942702..43944453-chr19:44007455..44009598,2	MCF-7	breast:
9	chr19:43942729..43944786-chr19:43970636..43972210,2	MCF-7	breast:
10	chr19:43936721..43937673-chr19:43951109..43951816,2	MCF-7	breast:
11	chr19:43950972..43953195-chr19:43955258..43957293,2	MCF-7	breast:
12	chr19:43950879..43951915-chr19:44023292..44024529,15	K562	blood:
13	chr19:43949660..43952729-chr19:43966089..43969502,3	K562	blood:
14	chr19:43936817..43937670-chr19:44023393..44024322,3	K562	blood:
15	chr19:43820685..43821690-chr19:43929045..43930443,5	MCF-7	breast:
16	chr19:43949852..43952277-chr19:44156357..44158096,2	K562	blood:
17	chr19:43937028..43937653-chr19:43950851..43951764,3	MCF-7	breast:
18	chr19:43809862..43810443-chr19:43929397..43930009,2	MCF-7	breast:
19	chr19:43937678..43940228-chr19:44019604..44022571,2	MCF-7	breast:
20	chr19:43951229..43953633-chr19:43981664..43984219,2	MCF-7	breast:
21	chr19:43936775..43937531-chr19:44023386..44024282,4	MCF-7	breast:
22	chr19:43937119..43937651-chr19:44098505..44099433,2	MCF-7	breast:
23	chr19:43928535..43930747-chr19:43966422..43969412,2	MCF-7	breast:
24	chr19:43936721..43937673-chr19:43951109..43951816,2	MCF-7	breast:
25	chr19:43942400..43947044-chr19:43967250..43970389,5	MCF-7	breast:
26	chr19:43937028..43937653-chr19:43950851..43951764,3	MCF-7	breast:
27	chr19:43821071..43821590-chr19:43929652..43930334,2	MCF-7	breast:
28	chr19:43950463..43951811-chr19:44023286..44024411,8	MCF-7	breast:

Variant related genes	Relation type
TEX101	TF binding region
TEX101	CpG island
ENSG00000105755	chromatin interactions
ENSG00000176531	chromatin interactions
ENSG00000124466	chromatin interactions

Extended variants
information (count: 1489 )
Associated
traits (count: 65 )

Variant overlapped rSNPs/rCNVs (count:1489 , 50 per page) page: 1 2 3 4 5 6 7 ... 30

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs374883875	chr19:43918850-43918851	ZNF genes & repeats Bivalent Enhancer	TF binding region	1 gene(s)	Overlapped CNVs	n/a
2	rs146377649	chr19:43918860-43918861	ZNF genes & repeats Bivalent Enhancer	TF binding region	1 gene(s)	Overlapped CNVs	n/a
3	rs563131394	chr19:43918877-43918878	ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island	1 gene(s)	Overlapped CNVs	n/a
4	rs139750277	chr19:43918883-43918884	ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island	1 gene(s)	Overlapped CNVs	n/a
5	rs552148783	chr19:43918898-43918899	ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island	1 gene(s)	Overlapped CNVs	n/a
6	rs548566250	chr19:43918942-43918943	ZNF genes & repeats Bivalent Enhancer	TF binding region	1 gene(s)	Overlapped CNVs	n/a
7	rs528248181	chr19:43918947-43918948	ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island	1 gene(s)	Overlapped CNVs	n/a
8	rs367583842	chr19:43918949-43918950	ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island	1 gene(s)	Overlapped CNVs	n/a
9	rs548387024	chr19:43918966-43918967	ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island	1 gene(s)	Overlapped CNVs	n/a
10	rs188828043	chr19:43919007-43919008	Weak transcription	TF binding region CpG island	1 gene(s)	Overlapped CNVs	n/a
11	rs537535582	chr19:43919019-43919020	Weak transcription	TF binding region CpG island	1 gene(s)	Overlapped CNVs	n/a
12	rs551043899	chr19:43919029-43919030	Weak transcription	TF binding region CpG island	1 gene(s)	Overlapped CNVs	n/a
13	rs200407182	chr19:43919030-43919031	Weak transcription	TF binding region CpG island	1 gene(s)	Overlapped CNVs	n/a
14	rs570711027	chr19:43919040-43919041	Weak transcription	TF binding region CpG island	1 gene(s)	Overlapped CNVs	n/a
15	rs540140506	chr19:43919055-43919056	Weak transcription	TF binding region CpG island	1 gene(s)	Overlapped CNVs	n/a
16	rs553361163	chr19:43919058-43919059	Weak transcription	TF binding region CpG island	1 gene(s)	Overlapped CNVs	n/a
17	rs557917413	chr19:43919059-43919060	Weak transcription	TF binding region CpG island	1 gene(s)	Overlapped CNVs	n/a
18	rs570142138	chr19:43919070-43919071	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs568486745	chr19:43919071-43919072	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs114675598	chr19:43919090-43919091	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs555531179	chr19:43919092-43919093	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs574238866	chr19:43919111-43919112	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs562871255	chr19:43919197-43919198	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs190911317	chr19:43919276-43919277	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs111533585	chr19:43919293-43919294	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs368978362	chr19:43919308-43919309	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs71169234	chr19:43919328-43919329	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs142620535	chr19:43919329-43919330	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs35518279	chr19:43919330-43919331	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs397738206	chr19:43919331-43919332	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs150069207	chr19:43919338-43919339	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs559417054	chr19:43919354-43919355	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs149856925	chr19:43919375-43919376	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs375556862	chr19:43919389-43919390	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs528378808	chr19:43919412-43919413	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs36031550	chr19:43919433-43919434	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs73563824	chr19:43919490-43919491	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
38	rs561863474	chr19:43919492-43919493	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs541765861	chr19:43919502-43919503	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs531032125	chr19:43919573-43919574	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs550761035	chr19:43919600-43919601	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs182579301	chr19:43919622-43919623	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs372708220	chr19:43919648-43919649	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs10401696	chr19:43919666-43919667	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
45	rs188092066	chr19:43919673-43919674	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs113500998	chr19:43919677-43919678	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs567092073	chr19:43919716-43919717	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs535742613	chr19:43919774-43919775	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs10407680	chr19:43919808-43919809	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
50	rs10407131	chr19:43919841-43919842	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a

Variant related diseases (count:65)

Disease	PMID	Source
Myelodysplastic syndrome	17634407	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Cancer	21637783	CNVD
Retinoblastoma	21504564	CNVD
Medulloblastoma	21979893	CNVD
Ovarian cancer	21720365	CNVD
Cancer	20164919	CNVD
Thoracic aortic aneurysm	21092924	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Prostate cancer	18632612	CNVD
Autism	22495311	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Ductal carcinoma	22052326	CNVD
Congenital nephrotic syndrome	18421352	CNVD
Astrocytoma	17934521	CNVD
Leukemia	17361228	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Breast cancer	21858162	CNVD
Breast cancer	17603634	CNVD
Glioma	21971842	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Endometrial cancer	22040021	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Oligodendroglial tumors	17285580	CNVD
renal disease	20603712	CNVD
Salivary gland adenoid cystic carcinoma	17545515	CNVD
Breast cancer	16608533	CNVD
Neuroblastoma	18923191	CNVD
Breast cancer	21364760	CNVD
Chordoma	18071362	CNVD
Urothelial carcinoma	21177765	CNVD
small cell lung cancer	20016488	CNVD
Wilms tumour	21544195	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Metanephric adenoma	20802469	CNVD
Acute myeloid leukemia	16864856	CNVD
Bladder cancer	21909424	CNVD
Medulloblastoma	16783165	CNVD
Acute myeloid leukemia	20729466	CNVD
Lung cancer	18438408	CNVD
Astrocytoma	22246337	CNVD
Ovarian cancer	22174824	CNVD
Breast cancer	21509527	CNVD
Cancer	20164920	CNVD
Multiple myeloma	16616336	CNVD
Ovarian cancer	20800559	CNVD
Ovarian clear cell carcinoma	19293255	CNVD
Myelofibrosis	22110671	CNVD
Breast cancer	16272173	CNVD
Spondylocostal dysostosis	21085971	CNVD
Nicotine metabolism	21956041	CNVD
Primary central nervous system lymphoma	21088137	CNVD
Glioblastoma multiforme	17002787	CNVD
Ovarian cancer	20844748	CNVD
Breast cancer	17133270	CNVD
Hepatocellular carcinoma	16750200	CNVD
Colorectal cancer	20459617	CNVD
Lung squamous cell carcinoma	22363434	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:475 , 50 per page) page: 1 2 3 4 5 6 7 ... 10

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:43918200-43919000	ZNF genes & repeats	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr19:43918800-43919000	Bivalent Enhancer	Foreskin Fibroblast Primary Cells skin02	Skin
3	chr19:43919000-43937400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
4	chr19:43920200-43930000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
5	chr19:43920400-43921800	Enhancers	Primary neutrophils fromperipheralblood	blood
6	chr19:43920800-43921600	Enhancers	Monocytes-CD14+_RO01746	blood
7	chr19:43920800-43921800	Enhancers	Primary monocytes fromperipheralblood	blood
8	chr19:43920800-43922000	Enhancers	Rectal Mucosa Donor 31	rectum
9	chr19:43921200-43921800	Bivalent Enhancer	HepG2	liver
10	chr19:43921400-43921600	Enhancers	Primary B cells from cord blood	blood
11	chr19:43921800-43929200	Weak transcription	Primary neutrophils fromperipheralblood	blood
12	chr19:43923800-43924200	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
13	chr19:43923800-43925200	Enhancers	HUES48 Cell Line	embryonic stem cell
14	chr19:43924000-43925400	Enhancers	iPS-15b Cell Line	embryonic stem cell
15	chr19:43924600-43925000	Enhancers	iPS-18 Cell Line	embryonic stem cell
16	chr19:43924800-43925000	Enhancers	iPS-20b Cell Line	embryonic stem cell
17	chr19:43925000-43925800	Weak transcription	iPS-20b Cell Line	embryonic stem cell
18	chr19:43925000-43930000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
19	chr19:43925200-43925800	Weak transcription	HUES48 Cell Line	embryonic stem cell
20	chr19:43925400-43925800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
21	chr19:43925800-43926000	Enhancers	HUES48 Cell Line	embryonic stem cell
22	chr19:43925800-43926000	Enhancers	iPS-15b Cell Line	embryonic stem cell
23	chr19:43925800-43926600	Enhancers	iPS-20b Cell Line	embryonic stem cell
24	chr19:43926000-43930000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
25	chr19:43926400-43926800	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
26	chr19:43926400-43926800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
27	chr19:43926800-43929400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
28	chr19:43926800-43929800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
29	chr19:43929200-43930000	Enhancers	Hela-S3	cervix
30	chr19:43929200-43931000	Enhancers	Cortex derived primary cultured neurospheres	brain
31	chr19:43929200-43932000	Enhancers	Rectal Mucosa Donor 31	rectum
32	chr19:43929200-43932600	Enhancers	Primary neutrophils fromperipheralblood	blood
33	chr19:43929400-43929800	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
34	chr19:43929400-43929800	Enhancers	Rectal Mucosa Donor 29	rectum
35	chr19:43929400-43930000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
36	chr19:43929400-43930200	Enhancers	Primary hematopoietic stem cells short term culture	blood
37	chr19:43929400-43931200	Enhancers	Duodenum Mucosa	Duodenum
38	chr19:43929400-43931400	Enhancers	Stomach Mucosa	stomach
39	chr19:43929600-43929800	Enhancers	Primary T killer memory cells from peripheral blood	blood
40	chr19:43929600-43930000	Enhancers	Primary T helper cells PMA-I stimulated	--
41	chr19:43929600-43930200	Enhancers	Primary T helper naive cells fromperipheralblood	blood
42	chr19:43929600-43930200	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
43	chr19:43929600-43930400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
44	chr19:43929600-43930400	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
45	chr19:43929800-43930200	Enhancers	HUES64 Cell Line	embryonic stem cell
46	chr19:43929800-43930200	Active TSS	Rectal Mucosa Donor 29	rectum
47	chr19:43929800-43930200	Enhancers	Stomach Smooth Muscle	stomach
48	chr19:43929800-43930400	Enhancers	Primary B cells from peripheral blood	blood
49	chr19:43929800-43930400	Flanking Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
50	chr19:43929800-43930600	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links