Variant report

Variant	nsv1067235
Chromosome Location	chr16:81204423-81303759
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1829)
CpG islands
(count:1101)
Chromatin interactive
region (count:111)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1829 , 50 per page) page: 1 2 3 4 5 6 7 ... 37

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr16:81248492-81248727	HepG2	liver:	n/a	n/a
2	ARID3A	chr16:81238745-81239052	HepG2	liver:	n/a	n/a
3	ARID3A	chr16:81208937-81209198	HepG2	liver:	n/a	n/a
4	ARID3A	chr16:81232328-81232582	HepG2	liver:	n/a	n/a
5	ARID3A	chr16:81294717-81295023	K562	blood:	n/a	n/a
6	ARID3A	chr16:81214625-81215127	HepG2	liver:	n/a	n/a
7	ARID3A	chr16:81214892-81214996	K562	blood:	n/a	n/a
8	ARID3A	chr16:81238678-81239059	K562	blood:	n/a	n/a
9	ARID3A	chr16:81224425-81224545	HepG2	liver:	n/a	n/a
10	ARID3A	chr16:81272071-81272314	HepG2	liver:	n/a	n/a
11	ATF1	chr16:81214812-81215125	K562	blood:	n/a	n/a
12	ATF1	chr16:81223002-81223299	K562	blood:	n/a	n/a
13	ATF3	chr16:81294716-81294975	K562	blood:	n/a	n/a
14	ATF3	chr16:81214923-81215132	K562	blood:	n/a	n/a
15	ATF3	chr16:81214868-81215234	H1-hESC	embryonic stem cell:	n/a	n/a
16	ATF3	chr16:81214756-81215189	H1-hESC	embryonic stem cell:	n/a	n/a
17	ATF3	chr16:81214880-81215235	K562	blood:	n/a	n/a
18	ATF3	chr16:81222914-81223172	K562	blood:	n/a	n/a
19	ATF3	chr16:81208842-81209330	A549	lung:	n/a	n/a
20	BACH1	chr16:81273333-81273632	H1-hESC	embryonic stem cell:	n/a	n/a
21	BACH1	chr16:81282039-81282283	H1-hESC	embryonic stem cell:	n/a	n/a
22	BACH1	chr16:81252910-81253010	H1-hESC	embryonic stem cell:	n/a	n/a
23	BACH1	chr16:81294906-81295016	K562	blood:	n/a	n/a
24	BCL3	chr16:81206697-81207272	GM12878	blood:	n/a	chr16:81207055-81207064 chr16:81207056-81207065
25	BCL3	chr16:81206605-81207349	GM12878	blood:	n/a	chr16:81207055-81207064 chr16:81207056-81207065
26	BHLHE40	chr16:81204595-81204730	K562	blood:	n/a	n/a
27	BHLHE40	chr16:81256204-81256523	K562	blood:	n/a	n/a
28	BHLHE40	chr16:81222771-81223296	K562	blood:	n/a	n/a
29	BHLHE40	chr16:81214654-81214874	K562	blood:	n/a	n/a
30	BHLHE40	chr16:81269179-81269377	K562	blood:	n/a	n/a
31	BHLHE40	chr16:81294700-81294909	K562	blood:	n/a	n/a
32	BHLHE40	chr16:81286824-81287095	K562	blood:	n/a	n/a
33	BHLHE40	chr16:81224490-81224559	K562	blood:	n/a	n/a
34	BHLHE40	chr16:81204462-81204796	HepG2	liver:	n/a	n/a
35	BHLHE40	chr16:81204484-81204816	HepG2	liver:	n/a	n/a
36	BHLHE40	chr16:81238713-81238961	K562	blood:	n/a	n/a
37	BHLHE40	chr16:81248487-81248577	K562	blood:	n/a	n/a
38	BHLHE40	chr16:81277384-81277610	K562	blood:	n/a	n/a
39	BRCA1	chr16:81232353-81232533	HepG2	liver:	n/a	n/a
40	CBX3	chr16:81248387-81248717	K562	blood:	n/a	n/a
41	CBX3	chr16:81266474-81266740	K562	blood:	n/a	n/a
42	CBX3	chr16:81222933-81223263	K562	blood:	n/a	n/a
43	CBX3	chr16:81214767-81215170	K562	blood:	n/a	n/a
44	CCNT2	chr16:81254050-81254484	K562	blood:	n/a	n/a
45	CEBPB	chr16:81276566-81276982	K562	blood:	n/a	chr16:81276770-81276781
46	CEBPB	chr16:81276534-81276962	MCF-7	breast:	n/a	chr16:81276770-81276781
47	CEBPB	chr16:81224331-81224753	MCF-7	breast:	n/a	n/a
48	CEBPB	chr16:81214850-81215177	A549	lung:	n/a	chr16:81214955-81214966
49	CEBPB	chr16:81276587-81276957	Hela-S3	cervix:	n/a	chr16:81276770-81276781
50	CEBPB	chr16:81275729-81275979	A549	lung:	n/a	n/a

(count:1101 , 50 per page) page: 1 2 3 4 5 6 7 ... 23

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr16:81254719-81254769	MCF-7	breast:	n/a
2	chr16:81272281-81272331	HepG2	liver:	n/a
3	chr16:81214503-81214553	NB4	blood:	n/a
4	chr16:81254719-81254769	MCF-7	breast:	n/a
5	chr16:81272281-81272331	HepG2	liver:	n/a
6	chr16:81214503-81214553	NB4	blood:	n/a
7	chr16:81278776-81278826	ProgFib	skin:	n/a
8	chr16:81254169-81254219	NT2-D1	testis:	n/a
9	chr16:81254719-81254769	Hepatocyte	liver:	n/a
10	chr16:81278776-81278826	NHBE	bronchial:	n/a
11	chr16:81254169-81254219	HIPEpiC	eye:	n/a
12	chr16:81272080-81272130	MCF-7	breast:	n/a
13	chr16:81208471-81208521	RPTEC	kidney:	n/a
14	chr16:81255310-81255360	SKMC	muscle:	n/a
15	chr16:81254209-81254259	AoSMC	blood vessel:	n/a
16	chr16:81208471-81208521	LNCaP	prostate:	n/a
17	chr16:81223254-81223304	MCF-7	breast:	n/a
18	chr16:81223254-81223304	LNCaP	prostate:	n/a
19	chr16:81254169-81254219	MCF-7	breast:	n/a
20	chr16:81272500-81272550	NT2-D1	testis:	n/a
21	chr16:81255310-81255360	LNCaP	prostate:	n/a
22	chr16:81272429-81272479	K562	blood:	n/a
23	chr16:81272429-81272479	GM12891	blood:	n/a
24	chr16:81254010-81254060	BJ	skin:	n/a
25	chr16:81253692-81253742	NHDF-neo	bronchial:	n/a
26	chr16:81255310-81255360	K562	blood:	n/a
27	chr16:81272281-81272331	SKMC	muscle:	n/a
28	chr16:81278776-81278826	HMEC	breast:	n/a
29	chr16:81254209-81254259	MCF10A-Er-Src	breast:	n/a
30	chr16:81214503-81214553	T-47D	breast:	n/a
31	chr16:81223254-81223304	GM19239	blood:	n/a
32	chr16:81278776-81278826	HCM	heart:	n/a
33	chr16:81295095-81295145	HCM	heart:	n/a
34	chr16:81254209-81254259	RPTEC	kidney:	n/a
35	chr16:81248670-81248720	MCF-7	breast:	n/a
36	chr16:81295095-81295145	GM19239	blood:	n/a
37	chr16:81254169-81254219	HL-60	blood:	n/a
38	chr16:81278776-81278826	LNCaP	prostate:	n/a
39	chr16:81208471-81208521	T-47D	breast:	n/a
40	chr16:81254209-81254259	HEEpiC	esophagus:	n/a
41	chr16:81271937-81271987	GM12892	blood:	n/a
42	chr16:81254719-81254769	GM12878	blood:	n/a
43	chr16:81272080-81272130	HEEpiC	esophagus:	n/a
44	chr16:81254010-81254060	HCM	heart:	n/a
45	chr16:81272080-81272130	SK-N-SH_RA	brain:	n/a
46	chr16:81278776-81278826	NH-A	brain:	n/a
47	chr16:81223254-81223304	NH-A	brain:	n/a
48	chr16:81253692-81253742	AG04450	lung:	fetal
49	chr16:81254209-81254259	HepG2	liver:	n/a
50	chr16:81253692-81253742	Hepatocyte	liver:	n/a

(count:111 , 50 per page) page: 1 2 3

No.	Distal block	Cell Line	Cell type
1	chr16:81248661..81251389-chr16:81251410..81253409,3	K562	blood:
2	chr16:81206765..81209231-chr16:81209316..81211675,3	K562	blood:
3	chr16:81298425..81302121-chr16:81361527..81366002,4	MCF-7	breast:
4	chr16:81247005..81248627-chr16:81352449..81354700,2	MCF-7	breast:
5	chr16:81110679..81112204-chr16:81228037..81229586,2	MCF-7	breast:
6	chr16:81069222..81069838-chr16:81238638..81239329,2	MCF-7	breast:
7	chr16:81296996..81300713-chr16:81369954..81373640,4	MCF-7	breast:
8	chr16:81279093..81281040-chr16:81292310..81294888,2	MCF-7	breast:
9	chr16:81218978..81220795-chr16:81224166..81226450,2	MCF-7	breast:
10	chr16:81292493..81305608-chr16:81343220..81354506,32	MCF-7	breast:
11	chr16:81109182..81113855-chr16:81207453..81212433,5	MCF-7	breast:
12	chr16:81206765..81209231-chr16:81209316..81211675,3	K562	blood:
13	chr16:81238218..81239252-chr16:81247860..81248811,3	MCF-7	breast:
14	chr16:81237375..81239298-chr16:81246693..81248653,2	K562	blood:
15	chr16:81299764..81301490-chr16:81383537..81384858,4	MCF-7	breast:
16	chr16:81212604..81215452-chr16:81226306..81228554,2	MCF-7	breast:
17	chr16:81241192..81243910-chr16:81245039..81247038,2	K562	blood:
18	chr16:81290044..81291817-chr16:81293813..81295710,2	MCF-7	breast:
19	chr16:81221033..81223620-chr16:81234908..81237258,2	K562	blood:
20	chr16:81224361..81226842-chr16:81228033..81229534,2	K562	blood:
21	chr16:81294478..81295467-chr16:81383292..81384064,2	MCF-7	breast:
22	chr16:81264245..81265836-chr16:81282203..81285157,2	K562	blood:
23	chr16:81294426..81295369-chr16:81399868..81400402,2	MCF-7	breast:
24	chr16:81295184..81306354-chr16:81346133..81353360,18	MCF-7	breast:
25	chr16:81167266..81170181-chr16:81212814..81215037,2	MCF-7	breast:
26	chr16:81110779..81112641-chr16:81230562..81234042,3	MCF-7	breast:
27	chr16:81109214..81111850-chr16:81221258..81223565,2	MCF-7	breast:
28	chr16:81237375..81239298-chr16:81246693..81248653,2	K562	blood:
29	chr16:81297782..81301485-chr16:81326515..81330018,4	MCF-7	breast:
30	chr16:81232049..81234951-chr16:81236497..81238711,3	MCF-7	breast:
31	chr16:81241227..81242898-chr16:81245721..81248177,2	K562	blood:
32	chr16:81202808..81207445-chr16:81207542..81212680,8	MCF-7	breast:
33	chr16:81298705..81303185-chr16:81306285..81312157,8	MCF-7	breast:
34	chr16:81241227..81242898-chr16:81245721..81248177,2	K562	blood:
35	chr16:80957573..80958407-chr16:81248225..81248964,2	MCF-7	breast:
36	chr16:81295681..81298455-chr16:81299026..81301212,3	MCF-7	breast:
37	chr16:81238393..81239236-chr16:81383637..81384525,3	MCF-7	breast:
38	chr16:81069305..81071127-chr16:81245572..81248364,2	MCF-7	breast:
39	chr16:81238472..81239333-chr16:81771352..81772219,3	MCF-7	breast:
40	chr16:81245699..81248674-chr16:81249555..81252970,3	MCF-7	breast:
41	chr16:81207788..81211808-chr16:81213340..81216350,7	MCF-7	breast:
42	chr1:152741230..152741815-chr16:81212739..81213485,2	MCF-7	breast:
43	chr16:81299252..81302248-chr16:81302425..81304066,2	MCF-7	breast:
44	chr16:81110861..81112388-chr16:81235998..81238926,2	MCF-7	breast:
45	chr16:81202808..81207445-chr16:81207542..81212680,8	MCF-7	breast:
46	chr16:81207814..81210316-chr16:81213416..81216125,2	MCF-7	breast:
47	chr16:81245699..81248674-chr16:81249555..81252970,3	MCF-7	breast:
48	chr16:81296161..81297807-chr16:81309739..81311383,2	MCF-7	breast:
49	chr16:81299915..81302121-chr16:81315991..81317511,2	MCF-7	breast:
50	chr16:81208882..81211862-chr16:81326884..81329141,2	K562	blood:

No data

Variant related genes	Relation type
PKD1L2	TF binding region
BCMO1	TF binding region
PKD1L2	CpG island
BCMO1	CpG island
ENSG00000261609	chromatin interactions
ENSG00000261218	chromatin interactions
ENSG00000260228	chromatin interactions
ENSG00000245059	chromatin interactions
ENSG00000166473	chromatin interactions
ENSG00000260495	chromatin interactions
ENSG00000260213	chromatin interactions
ENSG00000140905	chromatin interactions
ENSG00000166454	chromatin interactions
ENSG00000166455	chromatin interactions

Extended variants
information (count: 6464 )
Associated
traits (count: 72 )

Variant overlapped rSNPs/rCNVs (count:6464 , 50 per page) page: 1 2 3 4 5 6 7 ... 130

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs11640279	chr16:81204423-81204424	Weak transcription ZNF genes & repeats Enhancers Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs367722632	chr16:81204427-81204428	Weak transcription ZNF genes & repeats Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs377275975	chr16:81204446-81204447	Weak transcription ZNF genes & repeats Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs572037129	chr16:81204468-81204469	Weak transcription ZNF genes & repeats Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs372575408	chr16:81204476-81204477	Weak transcription ZNF genes & repeats Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs111544175	chr16:81204493-81204494	Weak transcription ZNF genes & repeats Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs180718603	chr16:81204495-81204496	Weak transcription ZNF genes & repeats Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs542998060	chr16:81204505-81204506	Weak transcription ZNF genes & repeats Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs139536459	chr16:81204526-81204527	Weak transcription ZNF genes & repeats Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs369615685	chr16:81204537-81204538	Weak transcription ZNF genes & repeats Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs376071612	chr16:81204549-81204550	Weak transcription ZNF genes & repeats Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs74595131	chr16:81204576-81204577	Weak transcription ZNF genes & repeats Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs201949211	chr16:81204577-81204578	Weak transcription ZNF genes & repeats Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs149244169	chr16:81204593-81204594	Weak transcription ZNF genes & repeats Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs560318017	chr16:81204599-81204600	Weak transcription ZNF genes & repeats Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs369003470	chr16:81204601-81204602	Weak transcription ZNF genes & repeats Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs372465530	chr16:81204602-81204603	Weak transcription ZNF genes & repeats Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs201515335	chr16:81204626-81204627	Weak transcription ZNF genes & repeats Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs200674380	chr16:81204636-81204637	Weak transcription ZNF genes & repeats Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs200013974	chr16:81204645-81204646	Weak transcription ZNF genes & repeats Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs201282019	chr16:81204655-81204656	Weak transcription ZNF genes & repeats Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs573793862	chr16:81204656-81204657	Weak transcription ZNF genes & repeats Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs549644382	chr16:81204660-81204661	Weak transcription ZNF genes & repeats Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs371077270	chr16:81204665-81204666	Weak transcription ZNF genes & repeats Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs375380135	chr16:81204671-81204672	Weak transcription ZNF genes & repeats Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs376750104	chr16:81204679-81204680	Weak transcription ZNF genes & repeats Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs375315198	chr16:81204684-81204685	Weak transcription ZNF genes & repeats Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs367908857	chr16:81204688-81204689	Weak transcription ZNF genes & repeats Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs371778382	chr16:81204699-81204700	Weak transcription ZNF genes & repeats Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs531341015	chr16:81204714-81204715	Weak transcription ZNF genes & repeats Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs35271642	chr16:81204720-81204721	Weak transcription ZNF genes & repeats Enhancers Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
32	rs113934437	chr16:81204725-81204726	Weak transcription ZNF genes & repeats Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs79736308	chr16:81204751-81204752	Weak transcription ZNF genes & repeats Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs561509041	chr16:81204772-81204773	Weak transcription ZNF genes & repeats Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs538324504	chr16:81204782-81204783	Weak transcription ZNF genes & repeats Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs140869894	chr16:81204793-81204794	Weak transcription ZNF genes & repeats Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs58373026	chr16:81204797-81204798	Weak transcription ZNF genes & repeats Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs553597318	chr16:81204799-81204800	Weak transcription ZNF genes & repeats Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs569322111	chr16:81204802-81204803	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs140720787	chr16:81204803-81204804	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs71942827	chr16:81204804-81204805	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs202174954	chr16:81204805-81204806	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs111775442	chr16:81204806-81204807	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs368500354	chr16:81204818-81204819	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs565857601	chr16:81204822-81204823	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs536017675	chr16:81204823-81204824	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs10871404	chr16:81204829-81204830	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
48	rs576227876	chr16:81204833-81204834	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs545400819	chr16:81204853-81204854	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs564992586	chr16:81204888-81204889	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:72)

Disease	PMID	Source
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	21080181	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Autism	19415332	CNVD
Medulloblastoma	21979893	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Schizophrenia	22958593	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Autism	22495311	CNVD
Wilms tumour	21544195	CNVD
Prostate cancer	18632612	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Breast cancer	17850661	CNVD
Breast cancer	16702952	CNVD
Medulloblastoma	16968546	CNVD
Prostate cancer	19242612	CNVD
Cancer	22429812	CNVD
Ewing''s sarcoma	21437220	CNVD
Ewing''s sarcoma	22429812	CNVD
Melanoma	18172304	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	20837533	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Multiple myeloma	21628407	CNVD
Ovarian cancer	22174824	CNVD
Breast cancer	21858162	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Ewing''s sarcoma	17952124	CNVD
Breast cancer	17001317	CNVD
Breast cancer	17133270	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Breast cancer	17603634	CNVD
Prostate cancer	16573809	CNVD
Prostate cancer	17245344	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Medulloblastoma	16783165	CNVD
Breast cancer	21806811	CNVD
small cell lung cancer	20016488	CNVD
Prostate cancer	21965145	CNVD
Cancer	21183584	CNVD
Ovarian cancer	20844748	CNVD
Lung cancer	18438408	CNVD
Hepatocellular carcinoma	16750200	CNVD
Breast cancer	21509527	CNVD
Breast cancer	21364760	CNVD
Neurocytoma	17123091	CNVD
Central neurocytomas	17123091	CNVD
Ovarian clear cell carcinoma	21343371	CNVD
Autism	21865298	CNVD
Myelofibrosis	22110671	CNVD
Non-small cell lung cancer	21829676	CNVD
Neuroblastoma	18923524	CNVD
Lung squamous cell carcinoma	22363434	CNVD
Obesity	20622171	CNVD
Cancer	20164920	CNVD
Chronic lymphocytic leukemia	22228453	CNVD
Bipolar disorder	19114987	CNVD
Breast cancer	21990379	CNVD

Chromatin state (count:1009 , 50 per page) page: 1 2 3 4 5 6 7 ... 21

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr16:81171200-81206400	Weak transcription	Ovary	ovary
2	chr16:81188000-81209000	Weak transcription	Right Atrium	heart
3	chr16:81191200-81207000	Weak transcription	A549	lung
4	chr16:81192400-81206800	Weak transcription	H9 Cell Line	embryonic stem cell
5	chr16:81193000-81206400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
6	chr16:81193400-81222600	Weak transcription	Brain Angular Gyrus	brain
7	chr16:81195000-81206800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
8	chr16:81195600-81214400	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
9	chr16:81195800-81214000	Weak transcription	Skeletal Muscle Male	skeletal muscle
10	chr16:81197000-81219000	Weak transcription	Brain Inferior Temporal Lobe	brain
11	chr16:81198800-81214200	Weak transcription	iPS-15b Cell Line	embryonic stem cell
12	chr16:81199000-81214400	Weak transcription	Right Ventricle	heart
13	chr16:81199800-81214000	Weak transcription	Skeletal Muscle Female	skeletal muscle
14	chr16:81200600-81214200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
15	chr16:81200800-81214600	Weak transcription	Fetal Heart	heart
16	chr16:81201400-81206600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
17	chr16:81201800-81211400	Strong transcription	Adipose Nuclei	Adipose
18	chr16:81201800-81222800	Weak transcription	Spleen	Spleen
19	chr16:81202000-81206000	Weak transcription	Left Ventricle	heart
20	chr16:81204400-81204800	ZNF genes & repeats	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
21	chr16:81204400-81204800	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
22	chr16:81204800-81206400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
23	chr16:81204800-81208800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
24	chr16:81205200-81214200	Weak transcription	H1 Cell Line	embryonic stem cell
25	chr16:81205200-81214400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
26	chr16:81205400-81214000	Weak transcription	HUES6 Cell Line	embryonic stem cell
27	chr16:81205600-81208000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
28	chr16:81206000-81207000	Strong transcription	Left Ventricle	heart
29	chr16:81206200-81209200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
30	chr16:81206400-81207600	Strong transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
31	chr16:81206400-81208400	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
32	chr16:81206400-81208400	Strong transcription	Ovary	ovary
33	chr16:81206600-81208000	Strong transcription	ES-I3 Cell Line	embryonic stem cell
34	chr16:81206800-81207200	ZNF genes & repeats	H9 Cell Line	embryonic stem cell
35	chr16:81206800-81207600	ZNF genes & repeats	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
36	chr16:81207000-81207800	Strong transcription	A549	lung
37	chr16:81207000-81214200	Weak transcription	Left Ventricle	heart
38	chr16:81207200-81214200	Weak transcription	H9 Cell Line	embryonic stem cell
39	chr16:81207600-81207800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
40	chr16:81207600-81208000	Bivalent Enhancer	HepG2	liver
41	chr16:81207600-81208400	Genic enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
42	chr16:81207600-81208400	Weak transcription	NH-A	brain
43	chr16:81207600-81208800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
44	chr16:81207800-81208200	ZNF genes & repeats	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
45	chr16:81207800-81208200	Genic enhancers	A549	lung
46	chr16:81207800-81210800	Enhancers	Placenta	Placenta
47	chr16:81208000-81208400	Flanking Bivalent TSS/Enh	HepG2	liver
48	chr16:81208000-81210000	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
49	chr16:81208000-81210000	Enhancers	HMEC	breast
50	chr16:81208000-81210800	Weak transcription	ES-I3 Cell Line	embryonic stem cell

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links