Variant report

Variant	nsv1067626
Chromosome Location	chr9:204193-381489
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:2023)
CpG islands
(count:489)
Chromatin interactive
region (count:138)
LncRNA
region (count:2)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:2023 , 50 per page) page: 1 2 3 4 5 6 7 ... 41

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr9:371491-371553	K562	blood:	n/a	n/a
2	ARID3A	chr9:214214-215154	K562	blood:	n/a	n/a
3	ARID3A	chr9:229136-229466	K562	blood:	n/a	n/a
4	ARID3A	chr9:260270-260544	K562	blood:	n/a	n/a
5	ARID3A	chr9:238911-239096	K562	blood:	n/a	n/a
6	ARID3A	chr9:336046-336405	HepG2	liver:	n/a	n/a
7	ARID3A	chr9:210220-210873	K562	blood:	n/a	n/a
8	ARID3A	chr9:237608-238477	K562	blood:	n/a	n/a
9	ARID3A	chr9:250210-251866	K562	blood:	n/a	n/a
10	ARID3A	chr9:272758-273406	K562	blood:	n/a	chr9:273064-273079
11	ARID3A	chr9:272095-272522	K562	blood:	n/a	n/a
12	ARID3A	chr9:267916-268404	K562	blood:	n/a	n/a
13	ARID3A	chr9:215966-216247	K562	blood:	n/a	n/a
14	ATF1	chr9:312958-313372	K562	blood:	n/a	n/a
15	ATF1	chr9:272150-272512	K562	blood:	n/a	n/a
16	ATF1	chr9:222266-222777	K562	blood:	n/a	n/a
17	ATF1	chr9:249153-249485	K562	blood:	n/a	n/a
18	ATF1	chr9:270753-271026	K562	blood:	n/a	n/a
19	ATF1	chr9:272781-273161	K562	blood:	n/a	n/a
20	ATF1	chr9:211078-211816	K562	blood:	n/a	n/a
21	ATF2	chr9:272677-273240	GM12878	blood:	n/a	n/a
22	ATF2	chr9:297286-297859	GM12878	blood:	n/a	n/a
23	ATF2	chr9:272650-273286	GM12878	blood:	n/a	n/a
24	ATF3	chr9:210212-210461	K562	blood:	n/a	n/a
25	ATF3	chr9:272081-272576	K562	blood:	n/a	n/a
26	ATF3	chr9:326568-327022	H1-hESC	embryonic stem cell:	n/a	n/a
27	BACH1	chr9:214677-214706	H1-hESC	embryonic stem cell:	n/a	n/a
28	BACH1	chr9:214910-215270	H1-hESC	embryonic stem cell:	n/a	n/a
29	BACH1	chr9:207498-207603	K562	blood:	n/a	n/a
30	BATF	chr9:297422-297902	GM12878	blood:	n/a	chr9:297684-297695 chr9:297685-297695
31	BATF	chr9:297420-297885	GM12878	blood:	n/a	chr9:297684-297695 chr9:297685-297695
32	BATF	chr9:278668-278987	GM12878	blood:	n/a	n/a
33	BCL11A	chr9:331212-331567	H1-hESC	embryonic stem cell:	n/a	n/a
34	BCLAF1	chr9:214465-215559	GM12878	blood:	n/a	n/a
35	BCLAF1	chr9:297343-297922	GM12878	blood:	n/a	chr9:297687-297696 chr9:297688-297697
36	BCLAF1	chr9:272677-273191	GM12878	blood:	n/a	chr9:272862-272871
37	BCLAF1	chr9:272658-273387	GM12878	blood:	n/a	chr9:272862-272871
38	BCLAF1	chr9:307023-307293	GM12878	blood:	n/a	n/a
39	BCLAF1	chr9:297419-297950	GM12878	blood:	n/a	chr9:297687-297696 chr9:297688-297697
40	BHLHE40	chr9:218973-219054	K562	blood:	n/a	n/a
41	BHLHE40	chr9:215354-215372	GM12878	blood:	n/a	n/a
42	BHLHE40	chr9:237901-238275	K562	blood:	n/a	chr9:238023-238044
43	BHLHE40	chr9:297517-297717	K562	blood:	n/a	n/a
44	BHLHE40	chr9:259627-260475	K562	blood:	n/a	n/a
45	BHLHE40	chr9:214650-215428	K562	blood:	n/a	n/a
46	BHLHE40	chr9:270725-270976	GM12878	blood:	n/a	n/a
47	BHLHE40	chr9:214569-215152	GM12878	blood:	n/a	n/a
48	BHLHE40	chr9:214106-214306	K562	blood:	n/a	n/a
49	BHLHE40	chr9:209140-209345	K562	blood:	n/a	n/a
50	BHLHE40	chr9:214709-215301	HepG2	liver:	n/a	n/a

(count:489 , 50 per page) page: 1 2 3 4 5 6 7 ... 10

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr9:214612-214662	HCPEpiC	choroid plexus:	n/a
2	chr9:214612-214662	HCPEpiC	choroid plexus:	n/a
3	chr9:214268-214318	HRE	kidney:	n/a
4	chr9:214612-214662	HCT-116	colon:	n/a
5	chr9:214612-214662	HEK293	kidney:	embryo
6	chr9:214612-214662	AG04450	lung:	fetal
7	chr9:211689-211739	HPAEpiC	pulmonary alveolar:	n/a
8	chr9:214268-214318	K562	blood:	n/a
9	chr9:215561-215611	AG10803	skin:	n/a
10	chr9:215368-215418	Caco-2	colon:	n/a
11	chr9:214612-214662	A549	lung:	n/a
12	chr9:273072-273122	GM12891	blood:	n/a
13	chr9:214268-214318	AG04450	lung:	fetal
14	chr9:215561-215611	AG04449	skin:	fetal
15	chr9:214612-214662	K562	blood:	n/a
16	chr9:211689-211739	AoSMC	blood vessel:	n/a
17	chr9:214612-214662	U87	brain:	n/a
18	chr9:215561-215611	AG04450	lung:	fetal
19	chr9:214612-214662	Hepatocyte	liver:	n/a
20	chr9:214612-214662	SKMC	muscle:	n/a
21	chr9:215368-215418	GM12892	blood:	n/a
22	chr9:213650-213700	NT2-D1	testis:	n/a
23	chr9:211689-211739	GM12892	blood:	n/a
24	chr9:214268-214318	HAEpiC	amniotic membrane:	n/a
25	chr9:213650-213700	SK-N-MC	brain:	n/a
26	chr9:213650-213700	K562	blood:	n/a
27	chr9:215561-215611	GM12892	blood:	n/a
28	chr9:273072-273122	AoSMC	blood vessel:	n/a
29	chr9:214268-214318	HRPEpiC	eye:	n/a
30	chr9:215561-215611	Hepatocyte	liver:	n/a
31	chr9:214690-214740	PrEC	prostate:	n/a
32	chr9:213650-213700	HCT-116	colon:	n/a
33	chr9:211689-211739	GM06990	blood:	n/a
34	chr9:214268-214318	T-47D	breast:	n/a
35	chr9:215561-215611	NHDF-neo	bronchial:	n/a
36	chr9:215368-215418	HRCEpiC	kidney:	n/a
37	chr9:213650-213700	LNCaP	prostate:	n/a
38	chr9:214612-214662	AG09319	gingival:	n/a
39	chr9:214268-214318	HCT-116	colon:	n/a
40	chr9:215368-215418	HRPEpiC	eye:	n/a
41	chr9:214268-214318	AG10803	skin:	n/a
42	chr9:215561-215611	GM06990	blood:	n/a
43	chr9:213650-213700	HRCEpiC	kidney:	n/a
44	chr9:215561-215611	SK-N-MC	brain:	n/a
45	chr9:213650-213700	IMR90	lung:	fetal
46	chr9:273072-273122	GM12878	blood:	n/a
47	chr9:214690-214740	Hepatocyte	liver:	n/a
48	chr9:273072-273122	HPAEpiC	pulmonary alveolar:	n/a
49	chr9:214612-214662	T-47D	breast:	n/a
50	chr9:215368-215418	A549	lung:	n/a

(count:138 , 50 per page) page: 1 2 3

No.	Distal block	Cell Line	Cell type
1	chr9:223210..226112-chr9:277917..282090,3	K562	blood:
2	chr9:253544..257279-chr9:268731..273892,6	K562	blood:
3	chr9:246962..249799-chr9:250077..252857,2	K562	blood:
4	chr9:324085..328451-chr9:329787..332698,3	K562	blood:
5	chr9:288365..290115-chr9:299185..301598,2	MCF-7	breast:
6	chr9:347478..348338-chr9:806313..807172,2	MCF-7	breast:
7	chr9:347287..349476-chr9:362112..363970,2	MCF-7	breast:
8	chr9:264854..268401-chr9:271602..276392,5	K562	blood:
9	chr9:237820..240828-chr9:247584..251042,3	K562	blood:
10	chr9:284961..287002-chr9:306876..309185,2	K562	blood:
11	chr20:61557637..61559255-chr9:214332..216174,2	MCF-7	breast:
12	chr9:214856..218562-chr9:240584..242539,3	K562	blood:
13	chr9:276287..280123-chr9:282139..284880,4	K562	blood:
14	chr9:216842..219174-chr9:220888..224256,4	K562	blood:
15	chr9:235818..237375-chr9:247234..248835,2	K562	blood:
16	chr9:210056..211721-chr9:271493..274380,2	K562	blood:
17	chr9:326951..329483-chr9:330404..332162,2	K562	blood:
18	chr9:283346..286966-chr9:287946..290894,7	K562	blood:
19	chr9:318530..320927-chr9:322721..325349,2	K562	blood:
20	chr9:223853..225771-chr9:261619..263535,2	K562	blood:
21	chr9:275975..278627-chr9:279451..282123,3	K562	blood:
22	chr9:326951..329483-chr9:330404..332162,2	K562	blood:
23	chr9:217275..219531-chr9:301975..303827,2	MCF-7	breast:
24	chr9:285389..289218-chr9:290727..294143,4	K562	blood:
25	chr9:286841..289218-chr9:291668..294143,2	K562	blood:
26	chr9:213868..216890-chr9:248711..251891,4	K562	blood:
27	chr9:288365..290115-chr9:299185..301598,2	MCF-7	breast:
28	chr9:211063..213249-chr9:216572..219831,3	K562	blood:
29	chr9:214778..216543-chr9:219574..221163,2	MCF-7	breast:
30	chr9:247322..249745-chr9:277912..279940,2	K562	blood:
31	chr9:211063..213249-chr9:216572..219831,3	K562	blood:
32	chr9:316274..318543-chr9:331270..334145,2	MCF-7	breast:
33	chr9:237104..239333-chr9:240417..242425,2	K562	blood:
34	chr9:255761..258409-chr9:263285..266102,2	K562	blood:
35	chr9:250806..252981-chr9:269858..272236,2	MCF-7	breast:
36	chr9:255761..258409-chr9:263285..266102,2	K562	blood:
37	chr9:268983..271562-chr9:284279..286719,2	MCF-7	breast:
38	chr9:224171..226015-chr9:253370..255238,2	MCF-7	breast:
39	chr9:211395..217021-chr9:276782..283147,8	K562	blood:
40	chr9:246731..252463-chr9:270869..275661,7	K562	blood:
41	chr9:217275..219531-chr9:301975..303827,2	MCF-7	breast:
42	chr9:209849..211411-chr9:213516..215617,2	MCF-7	breast:
43	chr9:213656..215329-chr9:262330..263868,2	K562	blood:
44	chr9:276314..278461-chr9:285139..287718,2	K562	blood:
45	chr9:347797..348410-chr9:459774..460369,2	MCF-7	breast:
46	chr9:270180..272736-chr9:272837..274435,2	K562	blood:
47	chr9:252242..255061-chr9:271559..273805,3	K562	blood:
48	chr9:224695..226653-chr9:227779..229816,2	K562	blood:
49	chr9:207956..209819-chr9:211466..213662,2	MCF-7	breast:
50	chr9:277861..283096-chr9:291676..296273,5	K562	blood:

(count:2 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-C9orf66-1	chr9:267966-268273	ENSG00000235880.1
2	lnc-C9orf66-1	chr9:272905-273002	ENSG00000235880.1

No data

Variant related genes	Relation type
DOCK8	TF binding region
ENSG00000235880	TF binding region
C9orf66	TF binding region
DOCK8	CpG island
ENSG00000235880	CpG island
C9orf66	CpG island
ENSG00000235880	chromatin interactions
ENSG00000107099	chromatin interactions
ENSG00000101191	chromatin interactions
ENSG00000183784	chromatin interactions
ENSG00000227155	chromatin interactions

Extended variants
information (count: 9597 )
Associated
traits (count: 121 )

Variant overlapped rSNPs/rCNVs (count:9597 , 50 per page) page: 1 2 3 4 5 6 7 ... 192

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs139792198	chr9:206009-206010	Enhancers	n/a	n/a	Overlapped CNVs	n/a
2	rs10811218	chr9:206025-206026	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
3	rs369539459	chr9:206030-206031	Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs547144189	chr9:206044-206045	Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs540326598	chr9:206048-206049	Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs566980600	chr9:206054-206055	Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs534291565	chr9:206062-206063	Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs555504925	chr9:206064-206065	Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs181684847	chr9:206095-206096	Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs10964238	chr9:206106-206107	Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs552332361	chr9:206124-206125	Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs10757083	chr9:206132-206133	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
13	rs577465731	chr9:206143-206144	Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs544828680	chr9:206152-206153	Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs185716335	chr9:206183-206184	Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs188559375	chr9:206202-206203	Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs571854846	chr9:206204-206205	Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs10757084	chr9:206255-206256	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
19	rs149923498	chr9:206288-206289	Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs576006758	chr9:206305-206306	Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs74642807	chr9:206323-206324	Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs73370559	chr9:206337-206338	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
23	rs73370561	chr9:206340-206341	Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs552045867	chr9:206350-206351	Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs112132059	chr9:206382-206383	Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs375268840	chr9:206435-206436	Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs73370563	chr9:206459-206460	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
28	rs544646539	chr9:206477-206478	Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs549470726	chr9:206508-206509	Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs7022984	chr9:206512-206513	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
31	rs11793283	chr9:206519-206520	Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs181178413	chr9:206544-206545	Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs111752759	chr9:206554-206555	Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs538541316	chr9:206560-206561	Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs553581001	chr9:206568-206569	Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs572192535	chr9:206579-206580	Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs536028262	chr9:206580-206581	Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs144066826	chr9:206593-206594	Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs576007480	chr9:206594-206595	Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs543451211	chr9:206597-206598	Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs564865153	chr9:206660-206661	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs566806968	chr9:206666-206667	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs186151768	chr9:206671-206672	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs148686134	chr9:206694-206695	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs373504145	chr9:206722-206723	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs560166455	chr9:206744-206745	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs527907754	chr9:206747-206748	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs76879097	chr9:206793-206794	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs581731	chr9:206838-206839	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
50	rs377293842	chr9:206887-206888	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:121)

Disease	PMID	Source
Chronic lymphocytic leukemia	21546498	CNVD
Cancer	20164920	CNVD
Ovarian cancer	21720365	CNVD
Myelofibrosis	22110671	CNVD
Lynch syndrome	18415027	CNVD
Retinoblastoma	21504564	CNVD
Melanoma	18172304	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Glioblastoma multiforme	22286061	CNVD
Williams-beuren syndrome	18553513	CNVD
Disorders of sex development	21048976	CNVD
Pilocytic astrocytoma	18622384	CNVD
Pilomyxoid astrocytoma	18622384	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
prenatal diagnosis	20453657	CNVD
Gastric cancer	16715143	CNVD
Esophageal squamous carcinoma	18405350	CNVD
Intracranial aneurysm	16715129	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Disorders of sex development	22290220	CNVD
Glioblastoma multiforme	21080181	CNVD
Sudden cardiac death	19188705	CNVD
Non-small cell lung cancer	21829676	CNVD
Acute myeloid leukemia	16864856	CNVD
Cancer	21183584	CNVD
Non-small cell lung cancer	21952639	CNVD
Neuroblastoma	18923191	CNVD
Intellectual disability	22102821	CNVD
abnormal development	18461090	CNVD
Honadal dysgenesis	21048976	CNVD
Medulloblastoma	21979893	CNVD
Lung cancer	16740712	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Breast cancer	16608533	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Breast cancer	16272173	CNVD
Hepatocellular carcinoma	16750200	CNVD
Breast cancer	17133270	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Cervical cancer	21063398	CNVD
Retinoblastoma	22278416	CNVD
Splenic marginal zone lymphoma	18492102	CNVD
Biliary cancer	19435499	CNVD
Gastric cancer	21586687	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Myopathy	18421352	CNVD
Neuroblastoma	18664255	CNVD
Acute lymphoblastic leukemia	18957548	CNVD
Myeloproliferative neoplasm	17564968	CNVD
Malignant meningioma	17937814	CNVD
Glioma	21971842	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	17603634	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Hepatocellular carcinoma	22174799	CNVD
Oligodendroglial tumors	17285580	CNVD
Cutaneous squamous cell carcinomas	19131950	CNVD
Small bowel adenocarcinoma	21586687	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Renal cell carcinoma	18592004	CNVD
Developmental delay	19490664	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
microdeletion syndrome	16199537	CNVD
Non-syndromic sensorineural hearing loss	21987784	CNVD
Cancer	20164919	CNVD
Chronic myeloid leukemia	21384125	CNVD
Autism	22495311	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
small cell lung cancer	20016488	CNVD
Developmental delay	21147756	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Schizophrenia	20967226	CNVD
Lung cancer	18438408	CNVD
Autism	20531469	CNVD
XY gonadal dysgenesis	20685758	CNVD
Urothelial carcinoma	21177765	CNVD
Oral cancer	21386901	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD
early-passage human iPS cells	21368824	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Breast cancer	22522925	CNVD
Developmental delay	20808231	CNVD
Obesity	20808231	CNVD
Myelodysplastic syndrome	21251322	CNVD
Primary immunodeficiency	22942019	CNVD
Melanoma	20877625	CNVD
Autism	20858261	CNVD
Epilepsy	20858261	CNVD
Mental retardation	20858261	CNVD
Breast cancer	21785460	CNVD
Prostate cancer	18632612	CNVD
Esophageal adenocarcinoma	19417022	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Cancer	21215367	CNVD
Renal cell carcinoma	21215367	CNVD
Williams Syndrome	20824207	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Pancreatic cancer	17952125	CNVD
T-cell lymphomas	22341440	CNVD
Breast cancer	21364760	CNVD
Bipolar disorder	19114987	CNVD
Breast cancer	21858162	CNVD
Renal cell carcinoma	21668985	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD

Chromatin state (count:2514 , 50 per page) page: 1 2 3 4 5 6 7 ... 51

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:206000-207000	Enhancers	Monocytes-CD14+_RO01746	blood
2	chr9:206000-207200	Enhancers	Primary monocytes fromperipheralblood	blood
3	chr9:206200-206600	Enhancers	Primary neutrophils fromperipheralblood	blood
4	chr9:206600-208800	Weak transcription	Primary neutrophils fromperipheralblood	blood
5	chr9:207000-208400	Weak transcription	Monocytes-CD14+_RO01746	blood
6	chr9:207200-207800	Weak transcription	Primary monocytes fromperipheralblood	blood
7	chr9:207800-213600	Enhancers	Primary monocytes fromperipheralblood	blood
8	chr9:208000-208800	Enhancers	K562	blood
9	chr9:208400-208600	Enhancers	Monocytes-CD14+_RO01746	blood
10	chr9:208600-209800	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
11	chr9:208800-209800	Enhancers	Primary hematopoietic stem cells short term culture	blood
12	chr9:208800-209800	Flanking Active TSS	K562	blood
13	chr9:208800-213200	Enhancers	Primary neutrophils fromperipheralblood	blood
14	chr9:209200-209800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
15	chr9:209200-209800	Enhancers	Spleen	Spleen
16	chr9:209800-210400	Enhancers	Monocytes-CD14+_RO01746	blood
17	chr9:209800-211000	Weak transcription	Spleen	Spleen
18	chr9:209800-213400	Enhancers	K562	blood
19	chr9:209800-213600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
20	chr9:209800-214000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
21	chr9:210400-210600	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
22	chr9:210600-211000	Enhancers	Monocytes-CD14+_RO01746	blood
23	chr9:210600-211400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
24	chr9:210800-212600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
25	chr9:211000-211400	Enhancers	Pancreas	Pancrea
26	chr9:211000-211400	Enhancers	Spleen	Spleen
27	chr9:211000-214600	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
28	chr9:211200-211400	Enhancers	Placenta	Placenta
29	chr9:211200-212200	Enhancers	Adipose Nuclei	Adipose
30	chr9:211400-211600	Flanking Active TSS	Fetal Adrenal Gland	Adrenal Gland
31	chr9:211400-212000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
32	chr9:211400-212200	Enhancers	Breast Myoepithelial Primary Cells	Breast
33	chr9:211400-213600	Weak transcription	Pancreas	Pancrea
34	chr9:211400-214000	Enhancers	Primary B cells from cord blood	blood
35	chr9:211400-214000	Weak transcription	Spleen	Spleen
36	chr9:211600-211800	Enhancers	Fetal Adrenal Gland	Adrenal Gland
37	chr9:211800-212600	Flanking Active TSS	Fetal Adrenal Gland	Adrenal Gland
38	chr9:212000-214400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
39	chr9:212200-214000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
40	chr9:212200-214000	Weak transcription	Adipose Nuclei	Adipose
41	chr9:212400-213000	Enhancers	Primary hematopoietic stem cells	blood
42	chr9:212600-212800	Bivalent/Poised TSS	Fetal Kidney	kidney
43	chr9:212600-212800	Enhancers	Skeletal Muscle Female	skeletal muscle
44	chr9:212600-213000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
45	chr9:212600-213600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
46	chr9:213000-214000	Weak transcription	Primary hematopoietic stem cells	blood
47	chr9:213000-215200	Active TSS	Brain Substantia Nigra	brain
48	chr9:213200-213400	Bivalent/Poised TSS	Fetal Kidney	kidney
49	chr9:213200-214400	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood
50	chr9:213400-213800	Flanking Active TSS	K562	blood

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links