No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs374541456 |
chr9:104188817-104188818 |
Genic enhancers Strong transcription Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
2 |
rs3739721 |
chr9:104188842-104188843 |
Genic enhancers Strong transcription Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
3 |
rs376375686 |
chr9:104188847-104188848 |
Genic enhancers Strong transcription Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
4 |
rs370793608 |
chr9:104188849-104188850 |
Genic enhancers Strong transcription Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
5 |
rs374240733 |
chr9:104188851-104188852 |
Genic enhancers Strong transcription Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
6 |
rs368140282 |
chr9:104188871-104188872 |
Genic enhancers Strong transcription Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
7 |
rs141988626 |
chr9:104188879-104188880 |
Genic enhancers Strong transcription Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
8 |
rs188851404 |
chr9:104188901-104188902 |
Genic enhancers Strong transcription Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
9 |
rs387906226 |
chr9:104188909-104188910 |
Genic enhancers Strong transcription Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
10 |
rs35885472 |
chr9:104188918-104188919 |
Genic enhancers Strong transcription Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
11 |
rs533131687 |
chr9:104188925-104188926 |
Genic enhancers Strong transcription Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
12 |
rs201582514 |
chr9:104188947-104188948 |
Genic enhancers Strong transcription Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
13 |
rs559584742 |
chr9:104188978-104188979 |
Genic enhancers Strong transcription Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
14 |
rs2854705 |
chr9:104188991-104188992 |
Genic enhancers Strong transcription Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
15 |
rs376534311 |
chr9:104189001-104189002 |
Genic enhancers Strong transcription Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
16 |
rs2777350 |
chr9:104189015-104189016 |
Genic enhancers Strong transcription Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
17 |
rs2777351 |
chr9:104189016-104189017 |
Genic enhancers Strong transcription Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
18 |
rs528305537 |
chr9:104189063-104189064 |
Genic enhancers Strong transcription Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
19 |
rs561974572 |
chr9:104189089-104189090 |
Genic enhancers Strong transcription Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
20 |
rs529263838 |
chr9:104189097-104189098 |
Genic enhancers Strong transcription Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
21 |
rs35443504 |
chr9:104189099-104189100 |
Genic enhancers Strong transcription Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
22 |
rs144557386 |
chr9:104189165-104189166 |
Genic enhancers Strong transcription Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
23 |
rs75093537 |
chr9:104189167-104189168 |
Genic enhancers Strong transcription Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
24 |
rs192431066 |
chr9:104189181-104189182 |
Genic enhancers Strong transcription Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
25 |
rs76734656 |
chr9:104189193-104189194 |
Genic enhancers Strong transcription Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
26 |
rs112202090 |
chr9:104189203-104189204 |
Genic enhancers Strong transcription Weak transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
27 |
rs17773040 |
chr9:104189209-104189210 |
Genic enhancers Strong transcription Weak transcription Enhancers
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
28 |
rs148613786 |
chr9:104189223-104189224 |
Genic enhancers Strong transcription Weak transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
29 |
rs533211510 |
chr9:104189313-104189314 |
Genic enhancers Strong transcription Weak transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
30 |
rs142088967 |
chr9:104189316-104189317 |
Genic enhancers Strong transcription Weak transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
31 |
rs555551533 |
chr9:104189362-104189363 |
Genic enhancers Strong transcription Weak transcription Enhancers
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
32 |
rs183895835 |
chr9:104189451-104189452 |
Genic enhancers Strong transcription Enhancers ZNF genes & repeats Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
33 |
rs188230065 |
chr9:104189453-104189454 |
Genic enhancers Strong transcription Enhancers ZNF genes & repeats Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
34 |
rs570624417 |
chr9:104189455-104189456 |
Genic enhancers Strong transcription Enhancers ZNF genes & repeats Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
35 |
rs191920560 |
chr9:104189485-104189486 |
Genic enhancers Strong transcription Enhancers ZNF genes & repeats Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
36 |
rs151175394 |
chr9:104189491-104189492 |
Genic enhancers Strong transcription Enhancers ZNF genes & repeats Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
37 |
rs537781360 |
chr9:104189534-104189535 |
Genic enhancers Strong transcription Enhancers ZNF genes & repeats Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
38 |
rs184153664 |
chr9:104189543-104189544 |
Genic enhancers Strong transcription Enhancers ZNF genes & repeats Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
39 |
rs189663333 |
chr9:104189544-104189545 |
Genic enhancers Strong transcription Enhancers ZNF genes & repeats Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
40 |
rs140263869 |
chr9:104189562-104189563 |
Genic enhancers Strong transcription Enhancers ZNF genes & repeats Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
41 |
rs541709699 |
chr9:104189569-104189570 |
Genic enhancers Strong transcription Enhancers ZNF genes & repeats Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
42 |
rs568330877 |
chr9:104189573-104189574 |
Genic enhancers Strong transcription Enhancers ZNF genes & repeats Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
43 |
rs561883744 |
chr9:104189589-104189590 |
Genic enhancers Strong transcription Enhancers ZNF genes & repeats Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
44 |
rs115703955 |
chr9:104189613-104189614 |
Enhancers Genic enhancers Strong transcription ZNF genes & repeats Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
45 |
rs187730845 |
chr9:104189650-104189651 |
Enhancers Genic enhancers Strong transcription ZNF genes & repeats Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
46 |
rs569499451 |
chr9:104189662-104189663 |
Enhancers Genic enhancers Strong transcription ZNF genes & repeats Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
47 |
rs550729556 |
chr9:104189669-104189670 |
Enhancers Genic enhancers Strong transcription ZNF genes & repeats Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
48 |
rs1929480 |
chr9:104189680-104189681 |
Enhancers Genic enhancers Strong transcription ZNF genes & repeats Weak transcription
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
49 |
rs200351394 |
chr9:104189719-104189720 |
Enhancers Genic enhancers Strong transcription ZNF genes & repeats Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
50 |
rs546868362 |
chr9:104189727-104189728 |
Enhancers Genic enhancers Strong transcription ZNF genes & repeats Weak transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|