Variant report

Variant nsv159946
Chromosome Location chr1:228755745-228757939
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:86 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:228756400-228756600 Enhancers Primary T helper naive cells fromperipheralblood blood
2 chr1:228756400-228756800 Bivalent Enhancer Primary monocytes fromperipheralblood blood
3 chr1:228756600-228756800 Flanking Bivalent TSS/Enh H1 Cell Line embryonic stem cell
4 chr1:228756600-228756800 Flanking Bivalent TSS/Enh H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr1:228756600-228756800 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr1:228756600-228756800 Bivalent/Poised TSS H9 Cell Line embryonic stem cell
7 chr1:228756600-228756800 Enhancers Primary T cells fromperipheralblood blood
8 chr1:228756600-228756800 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells short term culture blood
9 chr1:228756600-228756800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
10 chr1:228756600-228756800 Flanking Bivalent TSS/Enh Primary T helper cells fromperipheralblood blood
11 chr1:228756600-228756800 Flanking Bivalent TSS/Enh Primary T regulatory cells fromperipheralblood blood
12 chr1:228756600-228756800 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
13 chr1:228756600-228756800 Flanking Bivalent TSS/Enh Foreskin Keratinocyte Primary Cells skin03 Skin
14 chr1:228756600-228756800 Flanking Bivalent TSS/Enh Foreskin Melanocyte Primary Cells skin03 Skin
15 chr1:228756600-228756800 Bivalent/Poised TSS Brain Cingulate Gyrus brain
16 chr1:228756600-228756800 Flanking Bivalent TSS/Enh Brain Hippocampus Middle brain
17 chr1:228756600-228756800 Flanking Bivalent TSS/Enh Brain Dorsolateral Prefrontal Cortex brain
18 chr1:228756600-228756800 Enhancers Duodenum Smooth Muscle Duodenum
19 chr1:228756600-228756800 Flanking Bivalent TSS/Enh Fetal Adrenal Gland Adrenal Gland
20 chr1:228756600-228756800 Bivalent Enhancer Fetal Intestine Small intestine
21 chr1:228756600-228756800 Bivalent Enhancer Fetal Muscle Trunk muscle
22 chr1:228756600-228756800 Flanking Bivalent TSS/Enh Fetal Stomach stomach
23 chr1:228756600-228756800 Bivalent Enhancer Fetal Thymus thymus
24 chr1:228756600-228756800 Flanking Bivalent TSS/Enh Gastric stomach
25 chr1:228756600-228756800 Flanking Bivalent TSS/Enh Left Ventricle heart
26 chr1:228756600-228756800 Bivalent/Poised TSS Small Intestine intestine
27 chr1:228756600-228756800 Flanking Bivalent TSS/Enh Spleen Spleen
28 chr1:228756600-228757000 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
29 chr1:228756600-228757000 Flanking Bivalent TSS/Enh H9 Derived Neuron Cultured Cells ES cell derived
30 chr1:228756600-228757000 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
31 chr1:228756600-228757000 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
32 chr1:228756600-228757000 Enhancers Primary neutrophils fromperipheralblood blood
33 chr1:228756600-228757000 Enhancers Primary B cells from peripheral blood blood
34 chr1:228756600-228757000 Active TSS Primary T cells from cord blood blood
35 chr1:228756600-228757000 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
36 chr1:228756600-228757000 Enhancers Primary T helper cells PMA-I stimulated --
37 chr1:228756600-228757000 Enhancers Primary T helper 17 cells PMA-I stimulated --
38 chr1:228756600-228757000 Enhancers Primary Natural Killer cells fromperipheralblood blood
39 chr1:228756600-228757000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
40 chr1:228756600-228757000 Flanking Bivalent TSS/Enh Foreskin Fibroblast Primary Cells skin02 Skin
41 chr1:228756600-228757000 Flanking Bivalent TSS/Enh Foreskin Keratinocyte Primary Cells skin02 Skin
42 chr1:228756600-228757000 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin01 Skin
43 chr1:228756600-228757000 Flanking Bivalent TSS/Enh Adipose Nuclei Adipose
44 chr1:228756600-228757000 Active TSS Brain Angular Gyrus brain
45 chr1:228756600-228757000 Active TSS Brain Inferior Temporal Lobe brain
46 chr1:228756600-228757000 Flanking Bivalent TSS/Enh Colonic Mucosa Colon
47 chr1:228756600-228757000 ZNF genes & repeats Esophagus oesophagus
48 chr1:228756600-228757000 Bivalent Enhancer Fetal Brain Male brain
49 chr1:228756600-228757000 Flanking Bivalent TSS/Enh Lung lung
50 chr1:228756600-228757000 Flanking Bivalent TSS/Enh Ovary ovary

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