The 2.0 version of rSNPBase

Variant report

Variant nsv159993
Chromosome Location chr1:241787545-241787608
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:75 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:241753400-241791200 Weak transcription Thymus Thymus
2 chr1:241756000-241791000 Weak transcription Fetal Thymus thymus
3 chr1:241758000-241790800 Weak transcription HUES64 Cell Line embryonic stem cell
4 chr1:241758000-241797200 Weak transcription Left Ventricle heart
5 chr1:241758000-241800200 Weak transcription Ovary ovary
6 chr1:241758800-241802400 Weak transcription Right Ventricle heart
7 chr1:241759000-241790600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr1:241766200-241798600 Weak transcription Fetal Muscle Leg muscle
9 chr1:241767800-241788600 Weak transcription Primary hematopoietic stem cells short term culture blood
10 chr1:241767800-241790600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
11 chr1:241768000-241787600 Weak transcription Primary T cells from cord blood blood
12 chr1:241768000-241791000 Weak transcription Primary hematopoietic stem cells blood
13 chr1:241775200-241791400 Weak transcription Breast Myoepithelial Primary Cells Breast
14 chr1:241776400-241788400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
15 chr1:241776400-241790800 Weak transcription K562 blood
16 chr1:241776400-241791200 Weak transcription HSMMtube muscle
17 chr1:241776400-241795000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
18 chr1:241776400-241795200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
19 chr1:241776400-241795800 Weak transcription Hela-S3 cervix
20 chr1:241776400-241797400 Weak transcription NHLF lung
21 chr1:241776800-241788000 Weak transcription NHEK skin
22 chr1:241776800-241790800 Weak transcription HUVEC blood vessel
23 chr1:241779200-241790600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
24 chr1:241779400-241790600 Weak transcription NH-A brain
25 chr1:241779400-241791400 Weak transcription HSMM muscle
26 chr1:241779400-241798600 Weak transcription Fetal Intestine Large intestine
27 chr1:241779400-241800400 Weak transcription Osteobl bone
28 chr1:241779400-241800600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
29 chr1:241779400-241801000 Weak transcription Fetal Intestine Small intestine
30 chr1:241779600-241789000 Weak transcription Pancreas Pancrea
31 chr1:241779600-241790800 Weak transcription HMEC breast
32 chr1:241779600-241796600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
33 chr1:241779800-241795200 Weak transcription Placenta Placenta
34 chr1:241781200-241789400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
35 chr1:241781200-241799800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
36 chr1:241783200-241787800 Weak transcription Rectal Mucosa Donor 29 rectum
37 chr1:241783400-241798000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
38 chr1:241783800-241788000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
39 chr1:241783800-241791200 Weak transcription Duodenum Smooth Muscle Duodenum
40 chr1:241784000-241791200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
41 chr1:241784200-241791000 Weak transcription iPS-20b Cell Line embryonic stem cell
42 chr1:241784400-241800600 Weak transcription Fetal Brain Male brain
43 chr1:241784800-241789000 Enhancers Fetal Heart heart
44 chr1:241785000-241788000 Strong transcription A549 lung
45 chr1:241785200-241788000 Weak transcription Primary monocytes fromperipheralblood blood
46 chr1:241785200-241798800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
47 chr1:241785400-241788000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
48 chr1:241785400-241797200 Weak transcription Fetal Adrenal Gland Adrenal Gland
49 chr1:241785600-241787800 Weak transcription Primary B cells from peripheral blood blood
50 chr1:241785600-241788000 Weak transcription Primary B cells from cord blood blood

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Last update: Aug 31, 2015