The 2.0 version of rSNPBase

Variant report

Variant nsv170989
Chromosome Location chr20:23124582-23124587
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:71 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:23118400-23131000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr20:23119800-23128600 Weak transcription Gastric stomach
3 chr20:23120200-23137600 Enhancers HUVEC blood vessel
4 chr20:23121000-23128000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
5 chr20:23121000-23144200 Enhancers Primary monocytes fromperipheralblood blood
6 chr20:23121200-23128800 Enhancers Muscle Satellite Cultured Cells --
7 chr20:23121200-23128800 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
8 chr20:23121200-23130800 Enhancers HSMM muscle
9 chr20:23121600-23127000 Enhancers Fetal Adrenal Gland Adrenal Gland
10 chr20:23121600-23130800 Enhancers NH-A brain
11 chr20:23121600-23138200 Enhancers Adipose Nuclei Adipose
12 chr20:23121800-23125800 Enhancers Skeletal Muscle Female skeletal muscle
13 chr20:23121800-23137600 Enhancers Primary hematopoietic stem cells short term culture blood
14 chr20:23121800-23143000 Enhancers NHDF-Ad bronchial
15 chr20:23122000-23125800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr20:23122000-23126400 Enhancers Primary Natural Killer cells fromperipheralblood blood
17 chr20:23122400-23124600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
18 chr20:23122400-23124800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
19 chr20:23122400-23126400 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
20 chr20:23122600-23125000 Enhancers HMEC breast
21 chr20:23122600-23126400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
22 chr20:23122600-23138000 Enhancers NHLF lung
23 chr20:23122800-23124600 Enhancers Monocytes-CD14+_RO01746 blood
24 chr20:23122800-23125000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
25 chr20:23122800-23128800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
26 chr20:23122800-23130800 Enhancers Osteobl bone
27 chr20:23123000-23124600 Enhancers Hela-S3 cervix
28 chr20:23123000-23130200 Enhancers Placenta Amnion Placenta Amnion
29 chr20:23123200-23127200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
30 chr20:23123400-23124600 Weak transcription Lung lung
31 chr20:23123400-23124800 Weak transcription Placenta Placenta
32 chr20:23123400-23124800 Enhancers HepG2 liver
33 chr20:23123400-23125000 Weak transcription Aorta Aorta
34 chr20:23123400-23129000 Weak transcription Right Ventricle heart
35 chr20:23123600-23124600 Weak transcription Esophagus oesophagus
36 chr20:23123600-23124600 Enhancers Fetal Heart heart
37 chr20:23123600-23124600 Weak transcription Fetal Muscle Trunk muscle
38 chr20:23123600-23124800 Weak transcription Psoas Muscle Psoas
39 chr20:23123600-23125200 Weak transcription Brain Hippocampus Middle brain
40 chr20:23123600-23125200 Weak transcription Fetal Muscle Leg muscle
41 chr20:23123600-23125600 Weak transcription Brain Substantia Nigra brain
42 chr20:23123600-23125800 Weak transcription Fetal Stomach stomach
43 chr20:23123600-23127000 Weak transcription Left Ventricle heart
44 chr20:23123600-23128200 Weak transcription Duodenum Mucosa Duodenum
45 chr20:23123600-23128200 Weak transcription Stomach Smooth Muscle stomach
46 chr20:23123600-23128600 Weak transcription Right Atrium heart
47 chr20:23123600-23132400 Weak transcription Ovary ovary
48 chr20:23123800-23124600 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
49 chr20:23123800-23125000 Enhancers Skeletal Muscle Male skeletal muscle
50 chr20:23123800-23125200 Enhancers NHEK skin

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Last update: Aug 31, 2015