Variant report
Variant | nsv2005 |
---|---|
Chromosome Location | chr17:20297445-20342222 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:73)
- CpG islands (count:183)
- Chromatin interactive region (count:0)
- LncRNA region (count:6)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No. | Transcrition factor | Chromosome Location | Cell Line | Cell type | Cell Stage | Matched TF binding sites |
---|---|---|---|---|---|---|
1 | BATF | chr17:20339552-20339955 | GM12878 | blood: | n/a | chr17:20339773-20339784 chr17:20339774-20339784 |
2 | BATF | chr17:20339605-20339854 | GM12878 | blood: | n/a | chr17:20339773-20339784 chr17:20339774-20339784 |
3 | BCL11A | chr17:20326172-20326448 | GM12878 | blood: | n/a | n/a |
4 | CTCF | chr17:20322082-20322532 | A549 | lung: | n/a | n/a |
5 | CTCF | chr17:20322162-20322414 | K562 | blood: | n/a | n/a |
6 | CTCF | chr17:20341011-20341087 | LNCaP | prostate: | n/a | n/a |
7 | CTCF | chr17:20322265-20322402 | HepG2 | liver: | n/a | n/a |
8 | CTCF | chr17:20322236-20322378 | LNCaP | prostate: | n/a | n/a |
9 | CTCF | chr17:20322239-20322399 | Pancreas_OC | pancreas: | n/a | n/a |
10 | CTCF | chr17:20322238-20322455 | K562 | blood: | n/a | n/a |
11 | CTCF | chr17:20338014-20338051 | Lung_OC | lung: | n/a | n/a |
12 | CTCF | chr17:20322290-20322422 | GM10266 | blood: | n/a | n/a |
13 | CTCF | chr17:20322312-20322400 | GM13977 | blood: | n/a | n/a |
14 | CTCF | chr17:20301107-20301172 | Pancreas_OC | pancreas: | n/a | n/a |
15 | CTCF | chr17:20322301-20322365 | Hela-S3 | cervix: | n/a | n/a |
16 | CTCF | chr17:20308844-20308936 | Lung_OC | lung: | n/a | n/a |
17 | CTCF | chr17:20322294-20322435 | MCF-7 | breast: | n/a | n/a |
18 | CTCF | chr17:20322293-20322429 | MCF-7 | breast: | n/a | n/a |
19 | CTCF | chr17:20322130-20322449 | A549 | lung: | n/a | n/a |
20 | CTCF | chr17:20322290-20322399 | K562 | blood: | n/a | n/a |
21 | CTCF | chr17:20322282-20322413 | Gliobla | brain: | n/a | n/a |
22 | CTCF | chr17:20322292-20322442 | MCF-7 | breast: | n/a | n/a |
23 | CTCF | chr17:20322284-20322434 | MCF-7 | breast: | n/a | n/a |
24 | CTCF | chr17:20298343-20298415 | GM13976 | blood: | n/a | n/a |
25 | CTCF | chr17:20322324-20322350 | H1-hESC | embryonic stem cell: | n/a | n/a |
26 | CTCF | chr17:20320785-20320815 | GM13976 | blood: | n/a | n/a |
27 | CTCF | chr17:20322254-20322429 | GM10248 | blood: | n/a | n/a |
28 | CTCF | chr17:20332253-20332281 | Lung_OC | lung: | n/a | n/a |
29 | CTCF | chr17:20322210-20322462 | K562 | blood: | n/a | n/a |
30 | CTCF | chr17:20298641-20298692 | GM13976 | blood: | n/a | n/a |
31 | CTCF | chr17:20322292-20322400 | A549 | lung: | n/a | n/a |
32 | CTCF | chr17:20322200-20322350 | HFF | foreskin: | n/a | n/a |
33 | CTCF | chr17:20322254-20322448 | MCF-7 | breast: | n/a | n/a |
34 | CTCF | chr17:20322220-20322370 | AG04449 | skin: | n/a | n/a |
35 | CTCF | chr17:20308873-20308981 | Kidney_OC | kidney: | n/a | n/a |
36 | CTCF | chr17:20322284-20322389 | NHEK | skin: | n/a | n/a |
37 | CTCF | chr17:20322243-20322435 | LNCaP | prostate: | n/a | n/a |
38 | CTCF | chr17:20322193-20322507 | A549 | lung: | n/a | n/a |
39 | CTCF | chr17:20322265-20322392 | Kidney_OC | kidney: | n/a | n/a |
40 | FOSL2 | chr17:20321308-20321496 | HepG2 | liver: | n/a | n/a |
41 | GATA2 | chr17:20325785-20326201 | K562 | blood: | n/a | chr17:20325991-20326012 chr17:20325985-20325998 |
42 | IRF4 | chr17:20339496-20339917 | GM12878 | blood: | n/a | n/a |
43 | IRF4 | chr17:20339541-20339982 | GM12878 | blood: | n/a | n/a |
44 | MYC | chr17:20341822-20341869 | HUVEC | blood vessel: | n/a | n/a |
45 | PAX5 | chr17:20339497-20339902 | GM12878 | blood: | n/a | n/a |
46 | PAX5 | chr17:20324208-20324526 | GM12878 | blood: | n/a | n/a |
47 | PAX5 | chr17:20326178-20326508 | GM12878 | blood: | n/a | chr17:20326453-20326463 |
48 | POLR2A | chr17:20327819-20327952 | Gliobla | brain: | n/a | n/a |
49 | POLR2A | chr17:20336406-20336703 | H1-hESC | embryonic stem cell: | n/a | n/a |
50 | POLR2A | chr17:20338649-20338825 | A549 | lung: | n/a | n/a |
No. | Chromosome Location | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr17:20339589-20339639 | ECC-1 | luminal epithelium: | n/a |
2 | chr17:20339589-20339639 | NT2-D1 | testis: | n/a |
3 | chr17:20339878-20339928 | PANC-1 | pancreas: | n/a |
4 | chr17:20339878-20339928 | AG09319 | gingival: | n/a |
5 | chr17:20339878-20339928 | AG04449 | skin: | fetal |
6 | chr17:20339878-20339928 | Hela-S3 | cervix: | n/a |
7 | chr17:20339878-20339928 | HRCEpiC | kidney: | n/a |
8 | chr17:20326541-20326591 | HRE | kidney: | n/a |
9 | chr17:20326541-20326591 | K562 | blood: | n/a |
10 | chr17:20339878-20339928 | HCF | heart: | n/a |
11 | chr17:20339589-20339639 | NH-A | brain: | n/a |
12 | chr17:20326541-20326591 | NB4 | blood: | n/a |
13 | chr17:20339878-20339928 | NT2-D1 | testis: | n/a |
14 | chr17:20326541-20326591 | SK-N-SH | brain: | n/a |
15 | chr17:20339589-20339639 | PANC-1 | pancreas: | n/a |
16 | chr17:20326541-20326591 | ovcar-3 | ovarian: | n/a |
17 | chr17:20339589-20339639 | Caco-2 | colon: | n/a |
18 | chr17:20326541-20326591 | AG09309 | skin: | n/a |
19 | chr17:20339878-20339928 | HRE | kidney: | n/a |
20 | chr17:20339589-20339639 | HepG2 | liver: | n/a |
21 | chr17:20339878-20339928 | MCF-7 | breast: | n/a |
22 | chr17:20339589-20339639 | AoSMC | blood vessel: | n/a |
23 | chr17:20339878-20339928 | AG09309 | skin: | n/a |
24 | chr17:20339589-20339639 | SAEC | small airway: | n/a |
25 | chr17:20326541-20326591 | PFSK-1 | brain: | n/a |
26 | chr17:20326541-20326591 | CMK | blood: | n/a |
27 | chr17:20326541-20326591 | AG09319 | gingival: | n/a |
28 | chr17:20339589-20339639 | T-47D | breast: | n/a |
29 | chr17:20339589-20339639 | MCF-7 | breast: | n/a |
30 | chr17:20339589-20339639 | HUVEC | blood vessel: | n/a |
31 | chr17:20339589-20339639 | Hela-S3 | cervix: | n/a |
32 | chr17:20339589-20339639 | U87 | brain: | n/a |
33 | chr17:20326541-20326591 | HIPEpiC | eye: | n/a |
34 | chr17:20339589-20339639 | NHDF-neo | bronchial: | n/a |
35 | chr17:20339589-20339639 | PrEC | prostate: | n/a |
36 | chr17:20339589-20339639 | HEEpiC | esophagus: | n/a |
37 | chr17:20326541-20326591 | NHDF-neo | bronchial: | n/a |
38 | chr17:20326541-20326591 | ECC-1 | luminal epithelium: | n/a |
39 | chr17:20326541-20326591 | RPTEC | kidney: | n/a |
40 | chr17:20339878-20339928 | Jurkat | blood: | n/a |
41 | chr17:20339878-20339928 | ovcar-3 | ovarian: | n/a |
42 | chr17:20339589-20339639 | NB4 | blood: | n/a |
43 | chr17:20339589-20339639 | AG09309 | skin: | n/a |
44 | chr17:20339878-20339928 | HNPCEpiC | eye: | n/a |
45 | chr17:20339589-20339639 | HRE | kidney: | n/a |
46 | chr17:20339589-20339639 | BJ | skin: | n/a |
47 | chr17:20339878-20339928 | ECC-1 | luminal epithelium: | n/a |
48 | chr17:20326541-20326591 | HRPEpiC | eye: | n/a |
49 | chr17:20339878-20339928 | HCPEpiC | choroid plexus: | n/a |
50 | chr17:20339878-20339928 | HEK293 | kidney: | embryo |
No data |
(count:6 , 50 per page) page:
1
No. | lncRNA name | Chromosome Location | lncRNA alias |
---|---|---|---|
1 | lnc-FAM106B-1 | chr17:20320741-20322363 | NONHSAT146570 |
2 | lnc-FAM106B-1 | chr17:20320763-20321272 | NONHSAT146571 |
3 | lnc-CCDC144C-1 | chr17:20303834-20303876 | NR_023380 |
4 | lnc-CCDC144C-1 | chr17:20305369-20305504 | NR_023380 |
5 | lnc-FAM106B-2 | chr17:20337350-20337598 | ENSG00000265556.1 |
6 | lnc-FAM106B-2 | chr17:20336519-20336570 | ENSG00000265556.1 |
No data |
No data |
Variant related genes | Relation type |
---|---|
FAM106B | TF binding region |
USP32P3 | TF binding region |
SRP68P3 | TF binding region |
ENSG00000265556 | TF binding region |
NOS2P3 | TF binding region |
FAM106B | CpG island |
USP32P3 | CpG island |
SRP68P3 | CpG island |
ENSG00000265556 | CpG island |
NOS2P3 | CpG island |
No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs554129378 | chr17:20303857-20303858 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
2 | rs564584494 | chr17:20304028-20304029 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
3 | rs188209556 | chr17:20304047-20304048 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
4 | rs115465086 | chr17:20304049-20304050 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
5 | rs192629475 | chr17:20304064-20304065 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
6 | rs143564615 | chr17:20304071-20304072 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
7 | rs369595359 | chr17:20304106-20304107 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
8 | rs111319512 | chr17:20304156-20304157 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
9 | rs560073837 | chr17:20304196-20304197 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
10 | rs527323307 | chr17:20304223-20304224 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
11 | rs552216980 | chr17:20304254-20304255 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
12 | rs570237619 | chr17:20304273-20304274 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
13 | rs372013682 | chr17:20304410-20304411 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
14 | rs549577221 | chr17:20304423-20304424 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
15 | rs567956226 | chr17:20304432-20304433 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
16 | rs535716411 | chr17:20304492-20304493 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
17 | rs553814048 | chr17:20304497-20304498 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
18 | rs572368052 | chr17:20304586-20304587 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
19 | rs539468387 | chr17:20304648-20304649 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
20 | rs113336373 | chr17:20304671-20304672 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
21 | rs558235840 | chr17:20304782-20304783 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
22 | rs576619439 | chr17:20304795-20304796 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
23 | rs543973201 | chr17:20304796-20304797 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
24 | rs562262488 | chr17:20304859-20304860 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
25 | rs574181437 | chr17:20304924-20304925 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
26 | rs113445495 | chr17:20304966-20304967 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
27 | rs541696353 | chr17:20305035-20305036 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
28 | rs559811954 | chr17:20305095-20305096 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
29 | rs527251961 | chr17:20305099-20305100 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
30 | rs551891252 | chr17:20305171-20305172 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
31 | rs538048771 | chr17:20305306-20305307 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
32 | rs563801063 | chr17:20305320-20305321 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
33 | rs375959559 | chr17:20305337-20305338 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
34 | rs370166680 | chr17:20305338-20305339 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
35 | rs373830630 | chr17:20305339-20305340 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
36 | rs201084729 | chr17:20305346-20305347 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
37 | rs531298401 | chr17:20305347-20305348 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
38 | rs199531358 | chr17:20305365-20305366 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
39 | rs185616265 | chr17:20305465-20305466 | Weak transcription | lncRNA | n/a | Overlapped CNVs | n/a |
40 | rs567896696 | chr17:20305479-20305480 | Weak transcription | lncRNA | n/a | Overlapped CNVs | n/a |
41 | rs535303440 | chr17:20305485-20305486 | Weak transcription | lncRNA | n/a | Overlapped CNVs | n/a |
42 | rs200553989 | chr17:20305514-20305515 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
43 | rs565838929 | chr17:20305532-20305533 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
44 | rs539779543 | chr17:20305552-20305553 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
45 | rs558172498 | chr17:20305653-20305654 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
46 | rs113584450 | chr17:20305745-20305746 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
47 | rs550023597 | chr17:20314671-20314672 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
48 | rs568271104 | chr17:20314682-20314683 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
49 | rs148897983 | chr17:20314684-20314685 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
50 | rs553875217 | chr17:20314698-20314699 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
Disease | PMID | Source |
---|---|---|
Wilms tumour | 21544195 | CNVD |
Esophageal adenocarcinoma | 18519675 | CNVD |
lymphocytic leukemia | 21291569 | CNVD |
Chronic lymphocytic leukemia | 21546498 | CNVD |
Acute lymphoblastic leukemia | 21390130 | CNVD |
Melanoma | 18172304 | CNVD |
Medulloblastoma | 21979893 | CNVD |
Breast cancer | 16608533 | CNVD |
Acute lymphoblastic leukemia | 20435627 | CNVD |
Chordoma | 21602918 | CNVD |
Miller-Dieker syndrome | 22283845 | CNVD |
Non-syndromic sensorineural hearing loss | 17457615 | CNVD |
Cancer | 22429812 | CNVD |
Chronic lymphocytic leukemia | 21795749 | CNVD |
Ewing''s sarcoma | 21437220 | CNVD |
Follicular lymphoma | 19010834 | CNVD |
Colorectal cancer | 20709793 | CNVD |
Acute myeloid leukemia | 16864856 | CNVD |
Endometrial cancer | 22040021 | CNVD |
Paraganglioma | 21461997 | CNVD |
Pheochromocytoma | 21461997 | CNVD |
Breast cancer | 22028636 | CNVD |
Breast cancer | 20837533 | CNVD |
Astrocytoma | 17387387 | CNVD |
Breast cancer | 21264507 | CNVD |
Hepatocellular carcinoma | 22174799 | CNVD |
Medulloblastoma | 21292688 | CNVD |
colon cancer | 17210682 | CNVD |
Acute lymphoblastic leukemia | 20067559 | CNVD |
Basal cell lymphoma | 17053054 | CNVD |
Basal cell lymphoma | 16317097 | CNVD |
Diffuse large b-cell lymphoma | 16317097 | CNVD |
Cancer | 16751803 | CNVD |
Endometrioid adenocarcinoma | 16974079 | CNVD |
Colorectal cancer | 19359472 | CNVD |
Embryonal rhabdomyosarcoma | 16790082 | CNVD |
Chronic lymphocytic leukemia | 17971485 | CNVD |
Basal cell lymphoma | 17170743 | CNVD |
Breast cancer | 16461572 | CNVD |
Colorectal cancer | 16272173 | CNVD |
Follicular lymphoma | 17170743 | CNVD |
Human rectal carcinomas | 16397240 | CNVD |
Oral squamous cell carcinoma | 17134496 | CNVD |
Breast cancer | 17133270 | CNVD |
Chronic lymphocytic leukemia | 18922857 | CNVD |
Esophageal squamous carcinoma | 21637470 | CNVD |
Glioblastoma multiforme | 21080181 | CNVD |
Ovarian cancer | 22174824 | CNVD |
Moyamoya disease | 22323933 | CNVD |
small cell lung cancer | 20016488 | CNVD |
Acute myeloid leukemia | 20729466 | CNVD |
Acute promyelocytic leukemia | 19109227 | CNVD |
T-cell prolymphocytic leukemia | 19278963 | CNVD |
Acute myeloid leukemia | 21251322 | CNVD |
Myelodysplastic syndrome | 21251322 | CNVD |
Cancer | 20164919 | CNVD |
Hodgkin''s lymphoma | 17606441 | CNVD |
Thoracic aortic aneurysm | 21092924 | CNVD |
Acute myeloid leukemia | 20724749 | CNVD |
Non-syndromic sensorineural hearing loss | 21030649 | CNVD |
Colorectal cancer | 21645411 | CNVD |
HIV/AIDS | 22844521 | CNVD |
Psoriasis | 22844521 | CNVD |
Rheumatoid arthritis | 22844521 | CNVD |
Sclerosis systemic | 22844521 | CNVD |
Systemic lupus erythematosus | 22844521 | CNVD |
HIV/AIDS | 17953491 | CNVD |
HIV/AIDS | 20877625 | CNVD |
Immune disease | 21076436 | CNVD |
Rheumatoid arthritis | 17953491 | CNVD |
Type 1 diabetes | 17953491 | CNVD |
HIV/AIDS | 15637236 | CNVD |
Prostate cancer | 18632612 | CNVD |
Lung cancer | 18438408 | CNVD |
Ovarian cancer | 21781307 | CNVD |
Autism | 22495311 | CNVD |
Breast cancer | 20668451 | CNVD |
Cancer | 20668451 | CNVD |
Lung cancer | 20668451 | CNVD |
Ovarian cancer | 20668451 | CNVD |
Pancreas cancer | 20668451 | CNVD |
Prostate cancer | 20668451 | CNVD |
Neurofibromatosis | 18196300 | CNVD |
Breast cancer | 17001317 | CNVD |
Rhabdomyosarcoma | 16790082 | CNVD |
Charcot-marie-tooth disease | 16463004 | CNVD |
Osteosarcoma | 22292074 | CNVD |
Breast cancer | 17603634 | CNVD |
Charcot | 16760730 | CNVD |
Mental retardation | 17901693 | CNVD |
Malignant fibrous histiocytomas | 21085701 | CNVD |
ovarian endometriomas | 16273235 | CNVD |
Smith-Magenis syndrome | 18923513 | CNVD |
Invasive pancreatic ductal carcinoma | 16982739 | CNVD |
Myelofibrosis | 22110671 | CNVD |
Breast cancer | 16272173 | CNVD |
Austim spectrum disorder | 21302340 | CNVD |
Autism | 22492990 | CNVD |
Congenital abnormalities | 21549014 | CNVD |
Developmental delay | 18414209 | CNVD |
Developmental delay | 21549014 | CNVD |
Epilepsy | 20970697 | CNVD |
Mental retardation | 18414209 | CNVD |
Mental retardation | 21549014 | CNVD |
Smith-Magenis syndrome | 21981782 | CNVD |
Smith-Magenis syndrome | 20188345 | CNVD |
Smith-Magenis syndrome | 16775514 | CNVD |
Smith-Magenis syndrome | 22585170 | CNVD |
Smith-Magenis syndrome | 22241247 | CNVD |
Autism | 20970697 | CNVD |
Mental retardation | 19951919 | CNVD |
Potocki-Lupski syndrome | 21271655 | CNVD |
Potocki-lupski syndrome | 17357070 | CNVD |
Potocki-lupski syndrome | 20110824 | CNVD |
Potocki-lupski syndrome | 18923514 | CNVD |
Potocki-lupski syndrome | 22241247 | CNVD |
Potocki-lupski syndrome | 20188345 | CNVD |
Schizophrenia | 21399695 | CNVD |
Mental retardation | 16773131 | CNVD |
Adenocarcinoma | 19607727 | CNVD |
Squamous cell cancer | 19607727 | CNVD |
Non-small cell lung cancer | 21829676 | CNVD |
Glioblastoma multiforme | 17002787 | CNVD |
Charcot-marie-tooth disease | 22470819 | CNVD |
Neurofibromatosis | 22470819 | CNVD |
Neuropathy | 22470819 | CNVD |
Smith-Magenis syndrome | 18301319 | CNVD |
Smith-Magenis syndrome | 17357070 | CNVD |
Smith-Magenis syndrome | 18469339 | CNVD |
Smith-Magenis syndrome | 22241097 | CNVD |
Smith-Magenis syndrome | 22470819 | CNVD |
Tourette syndrome | 18923514 | CNVD |
Type 1 diabetes | 22470819 | CNVD |
Potocki-lupski syndrome | 18469339 | CNVD |
Follicular lymphoma | 20505157 | CNVD |
T-cell lymphomas | 19863542 | CNVD |
Neuropathy | 17597781 | CNVD |
Hepatocellular carcinoma | 16750200 | CNVD |
Neurodevelopmental disorder | 17015230 | CNVD |
Smith-Magenis syndrome | 17597781 | CNVD |
Potocki-lupski syndrome | 18059269 | CNVD |
Potocki-lupski syndrome | 17597781 | CNVD |
Mental retardation | 17847001 | CNVD |
Multiple myeloma | 16616336 | CNVD |
Breast cancer | 20409316 | CNVD |
Acute lymphoblastic leukemia | 21339820 | CNVD |
Medulloblastoma | 16783165 | CNVD |
Breast cancer | 21509527 | CNVD |
Cancer | 17440070 | CNVD |
Non-syndromic sensorineural hearing loss | 17122850 | CNVD |
Non-syndromic sensorineural hearing loss | 21293372 | CNVD |
Breast cancer | 22522925 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr17:20304000-20304800 | Enhancers | NHEK | skin |
2 | chr17:20304800-20305600 | Weak transcription | NHEK | skin |
3 | chr17:20305600-20305800 | Enhancers | NHEK | skin |
4 | chr17:20314600-20337600 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
5 | chr17:20325200-20325600 | Enhancers | Monocytes-CD14+_RO01746 | blood |
6 | chr17:20325200-20325800 | Enhancers | Primary hematopoietic stem cells short term culture | blood |
7 | chr17:20325200-20326000 | Enhancers | Primary monocytes fromperipheralblood | blood |
8 | chr17:20325200-20326000 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
9 | chr17:20325200-20326000 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
10 | chr17:20325600-20326000 | Flanking Active TSS | Monocytes-CD14+_RO01746 | blood |
11 | chr17:20326400-20327200 | Enhancers | Primary B cells from peripheral blood | blood |
12 | chr17:20326800-20336400 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
13 | chr17:20327400-20334600 | Weak transcription | Brain Angular Gyrus | brain |
14 | chr17:20327600-20327800 | Enhancers | Primary hematopoietic stem cells short term culture | blood |
15 | chr17:20330600-20336800 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |