The 2.0 version of rSNPBase

Variant report

Variant nsv209386
Chromosome Location chr2:54346189-54346192
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:65 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:54343200-54347800 Weak transcription Sigmoid Colon Sigmoid Colon
2 chr2:54343200-54347800 Weak transcription Spleen Spleen
3 chr2:54343200-54350600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr2:54343400-54347400 Weak transcription Primary B cells from peripheral blood blood
5 chr2:54343400-54347600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
6 chr2:54343400-54347600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
7 chr2:54343400-54347600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
8 chr2:54343400-54347600 Weak transcription Thymus Thymus
9 chr2:54343400-54347800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
10 chr2:54343400-54347800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
11 chr2:54343400-54347800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
12 chr2:54343400-54347800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
13 chr2:54343400-54347800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
14 chr2:54343400-54347800 Weak transcription Aorta Aorta
15 chr2:54343400-54347800 Weak transcription Colonic Mucosa Colon
16 chr2:54343400-54347800 Weak transcription Fetal Brain Female brain
17 chr2:54343400-54347800 Weak transcription Gastric stomach
18 chr2:54343400-54347800 Weak transcription Lung lung
19 chr2:54343400-54347800 Weak transcription Right Ventricle heart
20 chr2:54343400-54347800 Weak transcription HSMM muscle
21 chr2:54343400-54348000 Weak transcription Primary T helper naive cells fromperipheralblood blood
22 chr2:54343400-54348000 Weak transcription Duodenum Smooth Muscle Duodenum
23 chr2:54343400-54348000 Weak transcription Right Atrium heart
24 chr2:54343400-54349000 Weak transcription HSMMtube muscle
25 chr2:54343400-54349400 Weak transcription Psoas Muscle Psoas
26 chr2:54343400-54349600 Weak transcription Placenta Amnion Placenta Amnion
27 chr2:54343400-54351000 Weak transcription Primary T cells fromperipheralblood blood
28 chr2:54343400-54353000 Weak transcription Fetal Lung lung
29 chr2:54343400-54388600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
30 chr2:54343600-54347800 Weak transcription Primary T helper naive cells from peripheral blood blood
31 chr2:54343600-54347800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
32 chr2:54343600-54347800 Weak transcription Brain Hippocampus Middle brain
33 chr2:54343600-54348000 Weak transcription Primary T helper cells fromperipheralblood blood
34 chr2:54343600-54348000 Weak transcription Adipose Nuclei Adipose
35 chr2:54343600-54348000 Weak transcription NHLF lung
36 chr2:54343600-54349000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
37 chr2:54343600-54349400 Weak transcription Pancreatic Islets Pancreatic Islet
38 chr2:54343600-54350000 Weak transcription Stomach Smooth Muscle stomach
39 chr2:54343600-54350600 Weak transcription Brain Cingulate Gyrus brain
40 chr2:54343800-54347800 Weak transcription Brain Substantia Nigra brain
41 chr2:54343800-54349000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
42 chr2:54343800-54349000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
43 chr2:54343800-54349400 Weak transcription Fetal Heart heart
44 chr2:54343800-54355800 Weak transcription Primary T helper cells PMA-I stimulated --
45 chr2:54344000-54346200 Weak transcription Fetal Adrenal Gland Adrenal Gland
46 chr2:54344000-54348000 Weak transcription Brain Inferior Temporal Lobe brain
47 chr2:54344000-54348000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
48 chr2:54344000-54349000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
49 chr2:54344000-54349800 Weak transcription Primary T cells from cord blood blood
50 chr2:54344000-54349800 Weak transcription Hela-S3 cervix

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Last update: Aug 31, 2015