Variant report

Variant	nsv213651
Chromosome Location	chr2:36389499-36390300
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 37 )
Associated
traits (count: 62 )

Variant overlapped rSNPs/rCNVs (count:37 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs13002738	chr2:36389501-36389502	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs561657651	chr2:36389503-36389504	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs566568758	chr2:36389505-36389506	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs13002744	chr2:36389507-36389508	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs528793877	chr2:36389542-36389543	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs185472042	chr2:36389543-36389544	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs1881780	chr2:36389568-36389569	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs146169669	chr2:36389573-36389574	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs532922400	chr2:36389574-36389575	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs527384729	chr2:36389601-36389602	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs551474976	chr2:36389608-36389609	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs189531679	chr2:36389610-36389611	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs548957987	chr2:36389630-36389631	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs369318079	chr2:36389643-36389644	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs566240019	chr2:36389649-36389650	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs537287221	chr2:36389669-36389670	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs548894341	chr2:36389707-36389708	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs567595502	chr2:36389723-36389724	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs181381639	chr2:36389751-36389752	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs552807854	chr2:36389809-36389810	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs11683331	chr2:36389863-36389864	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs139052077	chr2:36389867-36389868	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs538617769	chr2:36389873-36389874	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs557454540	chr2:36389878-36389879	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs1177518	chr2:36389892-36389893	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
26	rs377225065	chr2:36389893-36389894	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs543254407	chr2:36389913-36389914	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs11677576	chr2:36389931-36389932	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs11677615	chr2:36389993-36389994	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs11677621	chr2:36390026-36390027	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs561328016	chr2:36390060-36390061	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs80035994	chr2:36390140-36390141	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs540945308	chr2:36390190-36390191	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs565550388	chr2:36390224-36390225	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs369189923	chr2:36390225-36390226	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs149527564	chr2:36390244-36390245	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs185222520	chr2:36390257-36390258	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:62)

Disease	PMID	Source
Breast cancer	17393978	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Breast cancer	17603634	CNVD
Medulloblastoma	21979893	CNVD
Lynch syndrome	18415027	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Ovarian neoplasms	16753589	CNVD
Glioblastoma multiforme	17387387	CNVD
Neuroblastoma	17533364	CNVD
Neuroblastoma	18923191	CNVD
Endometrial cancer	22040021	CNVD
Adrenal tumor	17535989	CNVD
Breast cancer	21264507	CNVD
Basal cell lymphoma	17053054	CNVD
Medulloblastoma	17522785	CNVD
Cancer	23418310	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Ependymoma	16718352	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
lymphocytic leukemia	21291569	CNVD
Prostate cancer	18632612	CNVD
Bladder cancer	21909424	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Intellectual disability	22102821	CNVD
Cancer	20164919	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Autism	22495311	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Follicular lymphoma	20505157	CNVD
Autism	17483303	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Myofibroblastic sarcoma	19369631	CNVD
Esophageal adenocarcinoma	18519675	CNVD
Medulloblastoma	20607354	CNVD
Leukemia	18628472	CNVD
Autism	19521722	CNVD
Autism	18522746	CNVD
Breast cancer	21364760	CNVD
Wilms tumour	21544195	CNVD
Non-small cell lung cancer	18927303	CNVD
Hereditary gingival fibromatosis	19633868	CNVD
Breast cancer	21785460	CNVD
Lung cancer	18438408	CNVD
Myelofibrosis	22110671	CNVD
Breast cancer	21045282	CNVD
Prostate cancer	21965145	CNVD
Breast cancer	16397240	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Neuroblastoma	21508638	CNVD
Neurodevelopmental disorder	22521361	CNVD
Neurocytoma	17123091	CNVD
Autism	22495309	CNVD
small cell lung cancer	20016488	CNVD
Melanoma	18172304	CNVD
Cancer	16751803	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:36388400-36390400	Weak transcription	Breast Myoepithelial Primary Cells	Breast

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links