Variant report

Variant	nsv2247
Chromosome Location	chr18:29370842-29415712
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:595)
CpG islands
(count:61)
Chromatin interactive
region (count:19)
LncRNA
region (count:2)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:595 , 50 per page) page: 1 2 3 4 5 6 7 ... 12

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr18:29410587-29411037	HepG2	liver:	n/a	n/a
2	ARID3A	chr18:29399616-29400000	K562	blood:	n/a	n/a
3	ATF1	chr18:29401606-29402106	K562	blood:	n/a	n/a
4	ATF1	chr18:29399629-29399927	K562	blood:	n/a	n/a
5	ATF2	chr18:29399592-29399986	H1-hESC	embryonic stem cell:	n/a	n/a
6	ATF2	chr18:29406502-29407104	H1-hESC	embryonic stem cell:	n/a	n/a
7	ATF2	chr18:29405727-29406206	H1-hESC	embryonic stem cell:	n/a	n/a
8	ATF2	chr18:29399490-29399948	H1-hESC	embryonic stem cell:	n/a	n/a
9	ATF2	chr18:29406652-29407178	H1-hESC	embryonic stem cell:	n/a	n/a
10	ATF2	chr18:29405635-29406183	H1-hESC	embryonic stem cell:	n/a	n/a
11	ATF2	chr18:29371602-29372544	GM12878	blood:	n/a	n/a
12	ATF2	chr18:29371699-29372406	GM12878	blood:	n/a	n/a
13	BACH1	chr18:29405473-29405587	H1-hESC	embryonic stem cell:	n/a	n/a
14	BACH1	chr18:29399184-29400109	H1-hESC	embryonic stem cell:	n/a	n/a
15	BATF	chr18:29372132-29372577	GM12878	blood:	n/a	n/a
16	BATF	chr18:29379832-29380106	GM12878	blood:	n/a	n/a
17	BATF	chr18:29371486-29372130	GM12878	blood:	n/a	n/a
18	BATF	chr18:29371452-29372095	GM12878	blood:	n/a	n/a
19	BCL11A	chr18:29371641-29372573	GM12878	blood:	n/a	n/a
20	BCL11A	chr18:29371693-29372493	GM12878	blood:	n/a	n/a
21	BCLAF1	chr18:29371608-29372303	GM12878	blood:	n/a	n/a
22	BHLHE40	chr18:29399717-29399878	GM12878	blood:	n/a	n/a
23	BHLHE40	chr18:29405874-29406016	GM12878	blood:	n/a	n/a
24	BHLHE40	chr18:29401508-29402184	K562	blood:	n/a	n/a
25	BHLHE40	chr18:29371685-29372594	GM12878	blood:	n/a	n/a
26	BRCA1	chr18:29372509-29372526	GM12878	blood:	n/a	n/a
27	CBX3	chr18:29401628-29402091	K562	blood:	n/a	n/a
28	CCNT2	chr18:29401571-29402076	K562	blood:	n/a	n/a
29	CEBPB	chr18:29399586-29399910	IMR90	lung:	n/a	n/a
30	CEBPB	chr18:29410030-29410230	K562	blood:	n/a	chr18:29410070-29410081
31	CEBPB	chr18:29399475-29399849	MCF-7	breast:	n/a	n/a
32	CEBPB	chr18:29409950-29410192	HepG2	liver:	n/a	chr18:29410070-29410081
33	CEBPB	chr18:29399594-29399932	Hela-S3	cervix:	n/a	n/a
34	CEBPB	chr18:29372487-29372801	HepG2	liver:	n/a	n/a
35	CEBPB	chr18:29399557-29399895	H1-hESC	embryonic stem cell:	n/a	n/a
36	CEBPB	chr18:29399573-29399881	HepG2	liver:	n/a	n/a
37	CEBPB	chr18:29372557-29372689	HepG2	liver:	n/a	n/a
38	CEBPD	chr18:29401462-29402113	K562	blood:	n/a	n/a
39	CEBPD	chr18:29401501-29402135	K562	blood:	n/a	n/a
40	CHD1	chr18:29371935-29372084	GM12878	blood:	n/a	n/a
41	CHD1	chr18:29372457-29372709	GM12878	blood:	n/a	n/a
42	CHD1	chr18:29371565-29371646	GM12878	blood:	n/a	n/a
43	CHD2	chr18:29399058-29399909	H1-hESC	embryonic stem cell:	n/a	n/a
44	CHD2	chr18:29405470-29406249	H1-hESC	embryonic stem cell:	n/a	n/a
45	CHD2	chr18:29399194-29399342	K562	blood:	n/a	n/a
46	CHD2	chr18:29371707-29372581	GM12878	blood:	n/a	n/a
47	CREB1	chr18:29371601-29372101	GM12878	blood:	n/a	n/a
48	CTCF	chr18:29399480-29399630	WI-38	lung:	n/a	n/a
49	CTCF	chr18:29399546-29400059	K562	blood:	n/a	chr18:29399766-29399787 chr18:29399771-29399789 chr18:29399772-29399788 chr18:29399776-29399784 chr18:29399773-29399786
50	CTCF	chr18:29399680-29399830	HEEpiC	esophagus:	n/a	chr18:29399766-29399787 chr18:29399771-29399789 chr18:29399772-29399788 chr18:29399776-29399784 chr18:29399773-29399786

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr18:29409612-29409662	T-47D	breast:	n/a
2	chr18:29409612-29409662	GM19239	blood:	n/a
3	chr18:29409612-29409662	PFSK-1	brain:	n/a
4	chr18:29409612-29409662	Hepatocyte	liver:	n/a
5	chr18:29409612-29409662	MCF10A-Er-Src	breast:	n/a
6	chr18:29409612-29409662	SK-N-MC	brain:	n/a
7	chr18:29409612-29409662	IMR90	lung:	fetal
8	chr18:29409612-29409662	AoSMC	blood vessel:	n/a
9	chr18:29409612-29409662	SK-N-SH	brain:	n/a
10	chr18:29409612-29409662	BE2_C	brain:	n/a
11	chr18:29409612-29409662	ProgFib	skin:	n/a
12	chr18:29409612-29409662	AG10803	skin:	n/a
13	chr18:29409612-29409662	ovcar-3	ovarian:	n/a
14	chr18:29409612-29409662	ECC-1	luminal epithelium:	n/a
15	chr18:29409612-29409662	HCM	heart:	n/a
16	chr18:29409612-29409662	AG04450	lung:	fetal
17	chr18:29409612-29409662	HIPEpiC	eye:	n/a
18	chr18:29409612-29409662	HRCEpiC	kidney:	n/a
19	chr18:29409612-29409662	HL-60	blood:	n/a
20	chr18:29409612-29409662	HNPCEpiC	eye:	n/a
21	chr18:29409612-29409662	HCPEpiC	choroid plexus:	n/a
22	chr18:29409612-29409662	HRE	kidney:	n/a
23	chr18:29409612-29409662	HCF	heart:	n/a
24	chr18:29409612-29409662	A549	lung:	n/a
25	chr18:29409612-29409662	GM12891	blood:	n/a
26	chr18:29409612-29409662	NHDF-neo	bronchial:	n/a
27	chr18:29409612-29409662	HepG2	liver:	n/a
28	chr18:29409612-29409662	RPTEC	kidney:	n/a
29	chr18:29409612-29409662	MCF-7	breast:	n/a
30	chr18:29409612-29409662	U87	brain:	n/a
31	chr18:29409612-29409662	HAEpiC	amniotic membrane:	n/a
32	chr18:29409612-29409662	AG09309	skin:	n/a
33	chr18:29409612-29409662	PrEC	prostate:	n/a
34	chr18:29409612-29409662	NT2-D1	testis:	n/a
35	chr18:29409612-29409662	Jurkat	blood:	n/a
36	chr18:29409612-29409662	SAEC	small airway:	n/a
37	chr18:29409612-29409662	HCT-116	colon:	n/a
38	chr18:29409612-29409662	GM12878	blood:	n/a
39	chr18:29409612-29409662	Hela-S3	cervix:	n/a
40	chr18:29409612-29409662	NHBE	bronchial:	n/a
41	chr18:29409612-29409662	BJ	skin:	n/a
42	chr18:29409612-29409662	NH-A	brain:	n/a
43	chr18:29409612-29409662	NB4	blood:	n/a
44	chr18:29409612-29409662	HEK293	kidney:	embryo
45	chr18:29409612-29409662	SK-N-SH_RA	brain:	n/a
46	chr18:29409612-29409662	PANC-1	pancreas:	n/a
47	chr18:29409612-29409662	HUVEC	blood vessel:	n/a
48	chr18:29409612-29409662	Caco-2	colon:	n/a
49	chr18:29409612-29409662	GM12892	blood:	n/a
50	chr18:29409612-29409662	HEEpiC	esophagus:	n/a

(count:19 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr18:29135564..29136362-chr18:29399476..29400304,3	MCF-7	breast:
2	chr18:29415005..29417838-chr18:29671668..29674584,2	K562	blood:
3	chr18:29372571..29374604-chr18:29381332..29383402,2	MCF-7	breast:
4	chr18:29372571..29374604-chr18:29381332..29383402,2	MCF-7	breast:
5	chr18:29407667..29410510-chr18:29494386..29496036,2	K562	blood:
6	chr18:29004133..29005005-chr18:29399717..29400321,2	K562	blood:
7	chr18:29290630..29291464-chr18:29399315..29400108,2	MCF-7	breast:
8	chr18:29408804..29411024-chr18:29521543..29524021,2	K562	blood:
9	chr18:29320909..29321461-chr18:29399293..29400251,2	MCF-7	breast:
10	chr17:62221876..62224798-chr18:29373903..29375604,2	MCF-7	breast:
11	chr18:29321255..29322089-chr18:29396487..29397335,2	MCF-7	breast:
12	chr18:29402476..29405464-chr18:29407548..29409258,2	K562	blood:
13	chr18:29401567..29403770-chr18:29418064..29420663,2	K562	blood:
14	chr18:29403964..29405650-chr18:29407581..29409258,2	K562	blood:
15	chr18:29402476..29405464-chr18:29407548..29409258,2	K562	blood:
16	chr18:29406625..29408228-chr18:29410273..29412352,2	K562	blood:
17	chr18:29403964..29405650-chr18:29407581..29409258,2	K562	blood:
18	chr18:29364264..29367845-chr18:29371473..29373588,3	MCF-7	breast:
19	chr18:29406625..29408228-chr18:29410273..29412352,2	K562	blood:

(count:2 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-TTR-4	chr18:29387008-29387182	NONHSAT058834
2	lnc-TTR-4	chr18:29386112-29386292	NONHSAT058834

No data

Variant related genes	Relation type
TRAPPC8	TF binding region
TRAPPC8	CpG island
ENSG00000265008	chromatin interactions
ENSG00000263823	chromatin interactions
ENSG00000266402	chromatin interactions
ENSG00000134758	chromatin interactions
ENSG00000199753	chromatin interactions
ENSG00000238982	chromatin interactions
ENSG00000153339	chromatin interactions

Extended variants
information (count: 1724 )
Associated
traits (count: 72 )

Variant overlapped rSNPs/rCNVs (count:1724 , 50 per page) page: 1 2 3 4 5 6 7 ... 35

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs72926290	chr18:29370844-29370845	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs558233845	chr18:29370854-29370855	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs574301209	chr18:29370865-29370866	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs541731425	chr18:29370871-29370872	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs553731722	chr18:29370885-29370886	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs576717036	chr18:29370886-29370887	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs117276974	chr18:29371000-29371001	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs34749017	chr18:29371001-29371002	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
9	rs563710175	chr18:29371004-29371005	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs530861793	chr18:29371035-29371036	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs116998209	chr18:29371047-29371048	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs117416603	chr18:29371207-29371208	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
13	rs182531611	chr18:29371216-29371217	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
14	rs56141441	chr18:29371217-29371218	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
15	rs142649228	chr18:29371222-29371223	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
16	rs540294	chr18:29371257-29371258	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
17	rs564880335	chr18:29371292-29371293	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
18	rs532448287	chr18:29371310-29371311	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
19	rs550263605	chr18:29371367-29371368	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
20	rs568858957	chr18:29371368-29371369	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
21	rs535934331	chr18:29371383-29371384	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
22	rs75406310	chr18:29371400-29371401	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
23	rs567839542	chr18:29371443-29371444	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
24	rs116171874	chr18:29371452-29371453	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
25	rs553694787	chr18:29371453-29371454	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
26	rs146311291	chr18:29371455-29371456	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
27	rs187575015	chr18:29371472-29371473	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
28	rs528895920	chr18:29371512-29371513	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
29	rs192848194	chr18:29371529-29371530	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
30	rs575607925	chr18:29371679-29371680	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs138203422	chr18:29371712-29371713	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs544671	chr18:29371713-29371714	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
33	rs572695201	chr18:29371721-29371722	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs558940530	chr18:29371723-29371724	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs537388836	chr18:29371724-29371725	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs565095759	chr18:29371732-29371733	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs532278683	chr18:29371784-29371785	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs141915551	chr18:29371824-29371825	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs562330368	chr18:29371836-29371837	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs150628328	chr18:29371850-29371851	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs548303858	chr18:29371888-29371889	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs566613021	chr18:29371897-29371898	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs533882157	chr18:29371957-29371958	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs368377561	chr18:29372062-29372063	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
45	rs571831949	chr18:29372112-29372113	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
46	rs538928612	chr18:29372127-29372128	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
47	rs116745250	chr18:29372253-29372254	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs17662053	chr18:29372270-29372271	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
49	rs571431	chr18:29372347-29372348	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
50	rs139888150	chr18:29372372-29372373	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:72)

Disease	PMID	Source
Esophageal squamous carcinoma	18350619	CNVD
Follicular lymphoma	20505157	CNVD
Chordoma	21602918	CNVD
Ewing''s sarcoma	21437220	CNVD
Neuroblastoma	18923191	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	21080181	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Cancer	21637783	CNVD
Medulloblastoma	21979893	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Trisomy 18 syndrome	17576883	CNVD
lymphocytic leukemia	21291569	CNVD
Barrett''s syndrome	19417022	CNVD
Ewing''s sarcoma	17952124	CNVD
Multiple myeloma	17550852	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Glioblastoma multiforme	21922591	CNVD
Melanoma	18172304	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Lung cancer	18438408	CNVD
18q deletion syndrome	19533772	CNVD
Acute myeloid leukemia	16864856	CNVD
Colorectal cancer	21102417	CNVD
Colorectal cancer	20709793	CNVD
Pancreatic cancer	21811562	CNVD
Basal cell lymphoma	21115979	CNVD
Mucosa-associated lymphoid tissue lymphomas	21459788	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Oligodendroglial tumors	17285580	CNVD
colon cancer	17210682	CNVD
Breast cancer	21785460	CNVD
Hepatocellular carcinoma	16750200	CNVD
Prostate cancer	16573809	CNVD
Autism	16446308	CNVD
Colorectal cancer	19359472	CNVD
Colorectal cancer	16272173	CNVD
Human rectal carcinomas	16397240	CNVD
Medulloblastoma	18056178	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Cancer	16751803	CNVD
Metanephric adenoma	20802469	CNVD
small cell lung cancer	20016488	CNVD
Breast cancer	17133270	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Colorectal cancer	16774939	CNVD
Colorectal cancer	21297112	CNVD
Myelofibrosis	22110671	CNVD
Colorectal cancer	21645411	CNVD
Glioblastoma multiforme	17002787	CNVD
Cancer	21183584	CNVD
Breast cancer	17603634	CNVD
Thyroid cancer	19087340	CNVD
Urothelial carcinoma	21177765	CNVD
Oral cancer	21386901	CNVD
Colorectal cancer	16912164	CNVD
Renal cell carcinoma	19150565	CNVD
Multiple myeloma	16616336	CNVD
Colorectal cancer	19150955	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Acute myeloid leukemia	21251322	CNVD
Breast cancer	21364760	CNVD
Pancreatic cancer	21811587	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:684 , 50 per page) page: 1 2 3 4 5 6 7 ... 14

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr18:29363200-29375600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr18:29367800-29372200	Weak transcription	Fetal Intestine Large	intestine
3	chr18:29368400-29372200	Weak transcription	Fetal Intestine Small	intestine
4	chr18:29369600-29373600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
5	chr18:29369600-29375000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
6	chr18:29369600-29377200	Weak transcription	H9 Cell Line	embryonic stem cell
7	chr18:29369800-29371000	Weak transcription	HepG2	liver
8	chr18:29370400-29372800	Enhancers	Primary hematopoietic stem cells short term culture	blood
9	chr18:29370800-29371200	Enhancers	GM12878-XiMat	blood
10	chr18:29371000-29372600	Enhancers	Primary monocytes fromperipheralblood	blood
11	chr18:29371000-29373000	Enhancers	HepG2	liver
12	chr18:29371000-29373800	Enhancers	Monocytes-CD14+_RO01746	blood
13	chr18:29371200-29371600	Flanking Active TSS	GM12878-XiMat	blood
14	chr18:29371200-29373600	Enhancers	Liver	Liver
15	chr18:29371400-29372000	Enhancers	Primary hematopoietic stem cells	blood
16	chr18:29371400-29372200	Enhancers	Primary B cells from peripheral blood	blood
17	chr18:29371400-29372200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
18	chr18:29371400-29372400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
19	chr18:29371400-29372600	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
20	chr18:29371600-29372000	Enhancers	GM12878-XiMat	blood
21	chr18:29372000-29372200	Flanking Active TSS	GM12878-XiMat	blood
22	chr18:29372200-29372400	Enhancers	GM12878-XiMat	blood
23	chr18:29372200-29373400	Enhancers	Fetal Intestine Small	intestine
24	chr18:29372200-29373600	Enhancers	Fetal Intestine Large	intestine
25	chr18:29372400-29372600	Flanking Active TSS	GM12878-XiMat	blood
26	chr18:29372600-29374200	Enhancers	GM12878-XiMat	blood
27	chr18:29373600-29373800	ZNF genes & repeats	ES-UCSF4 Cell Line	embryonic stem cell
28	chr18:29373600-29376800	Weak transcription	Liver	Liver
29	chr18:29373800-29377000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
30	chr18:29375200-29375400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
31	chr18:29375600-29375800	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
32	chr18:29376800-29377400	Enhancers	Liver	Liver
33	chr18:29377200-29377400	Enhancers	H9 Cell Line	embryonic stem cell
34	chr18:29377200-29377600	Enhancers	ES-I3 Cell Line	embryonic stem cell
35	chr18:29377400-29378400	Weak transcription	Liver	Liver
36	chr18:29378400-29382000	Enhancers	Liver	Liver
37	chr18:29378600-29379400	Enhancers	K562	blood
38	chr18:29379400-29379800	Weak transcription	K562	blood
39	chr18:29380000-29380200	Enhancers	GM12878-XiMat	blood
40	chr18:29380000-29380200	Enhancers	K562	blood
41	chr18:29383400-29383800	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
42	chr18:29383800-29390800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
43	chr18:29384000-29390000	Weak transcription	Fetal Intestine Small	intestine
44	chr18:29387600-29387800	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
45	chr18:29387600-29387800	Enhancers	HUES6 Cell Line	embryonic stem cell
46	chr18:29387600-29388800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
47	chr18:29387800-29388400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
48	chr18:29387800-29390000	Weak transcription	HUES6 Cell Line	embryonic stem cell
49	chr18:29388400-29388600	Enhancers	ES-WA7 Cell Line	embryonic stem cell
50	chr18:29388400-29388600	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links