Variant report

Variant	nsv2478
Chromosome Location	chr19:38025340-38043818
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ATF1	chr19:38042063-38042450	K562	blood:	n/a	n/a
2	ATF3	chr19:38042132-38042371	K562	blood:	n/a	n/a
3	BHLHE40	chr19:38042616-38042831	GM12878	blood:	n/a	n/a
4	BHLHE40	chr19:38042170-38042959	K562	blood:	n/a	n/a
5	CCNT2	chr19:38042235-38042362	K562	blood:	n/a	n/a
6	CEBPB	chr19:38036471-38036489	K562	blood:	n/a	n/a
7	CEBPB	chr19:38036392-38036920	HepG2	liver:	n/a	chr19:38036825-38036836
8	CEBPB	chr19:38036427-38036998	A549	lung:	n/a	chr19:38036825-38036836
9	CEBPB	chr19:38036413-38036967	IMR90	lung:	n/a	chr19:38036825-38036836
10	CREB1	chr19:38041981-38042526	GM12878	blood:	n/a	n/a
11	CREB1	chr19:38041930-38042652	K562	blood:	n/a	n/a
12	CREB1	chr19:38041935-38042459	K562	blood:	n/a	n/a
13	CTCF	chr19:38042720-38042870	AG09309	skin:	n/a	chr19:38042813-38042831 chr19:38042815-38042828 chr19:38042815-38042828 chr19:38042808-38042829 chr19:38042814-38042830
14	CTCF	chr19:38042638-38042914	GM12891	blood:	n/a	chr19:38042813-38042831 chr19:38042815-38042828 chr19:38042815-38042828 chr19:38042808-38042829 chr19:38042814-38042830
15	CTCF	chr19:38042700-38042850	WI-38	lung:	n/a	chr19:38042813-38042831 chr19:38042815-38042828 chr19:38042815-38042828 chr19:38042808-38042829 chr19:38042814-38042830
16	CTCF	chr19:38042740-38042890	GM12873	blood:	n/a	chr19:38042813-38042831 chr19:38042815-38042828 chr19:38042815-38042828 chr19:38042808-38042829 chr19:38042814-38042830
17	CTCF	chr19:38042660-38042810	GM12865	blood:	n/a	n/a
18	CTCF	chr19:38042740-38042890	HepG2	liver:	n/a	chr19:38042813-38042831 chr19:38042815-38042828 chr19:38042815-38042828 chr19:38042808-38042829 chr19:38042814-38042830
19	CTCF	chr19:38042760-38042910	GM12878	blood:	n/a	chr19:38042813-38042831 chr19:38042815-38042828 chr19:38042815-38042828 chr19:38042808-38042829 chr19:38042814-38042830
20	CTCF	chr19:38042700-38042850	HFF-Myc	foreskin:	n/a	chr19:38042813-38042831 chr19:38042815-38042828 chr19:38042815-38042828 chr19:38042808-38042829 chr19:38042814-38042830
21	CTCF	chr19:38042760-38042910	BJ	skin:	n/a	chr19:38042813-38042831 chr19:38042815-38042828 chr19:38042815-38042828 chr19:38042808-38042829 chr19:38042814-38042830
22	CTCF	chr19:38042684-38042914	GM19240	blood:	n/a	chr19:38042813-38042831 chr19:38042815-38042828 chr19:38042815-38042828 chr19:38042808-38042829 chr19:38042814-38042830
23	CTCF	chr19:38042700-38042850	GM12878	blood:	n/a	chr19:38042813-38042831 chr19:38042815-38042828 chr19:38042815-38042828 chr19:38042808-38042829 chr19:38042814-38042830
24	CTCF	chr19:38042820-38042970	RPTEC	kidney:	n/a	n/a
25	CTCF	chr19:38042780-38042930	AG10803	skin:	n/a	chr19:38042813-38042831 chr19:38042815-38042828 chr19:38042815-38042828 chr19:38042808-38042829 chr19:38042814-38042830
26	CTCF	chr19:38042760-38042910	GM12875	blood:	n/a	chr19:38042813-38042831 chr19:38042815-38042828 chr19:38042815-38042828 chr19:38042808-38042829 chr19:38042814-38042830
27	CTCF	chr19:38042744-38042877	LNCaP	prostate:	n/a	chr19:38042813-38042831 chr19:38042815-38042828 chr19:38042815-38042828 chr19:38042808-38042829 chr19:38042814-38042830
28	CTCF	chr19:38042760-38042910	HAc	cerebellar:	n/a	chr19:38042813-38042831 chr19:38042815-38042828 chr19:38042815-38042828 chr19:38042808-38042829 chr19:38042814-38042830
29	CTCF	chr19:38042707-38042946	Spleen_OC	spleen:	n/a	chr19:38042813-38042831 chr19:38042815-38042828 chr19:38042815-38042828 chr19:38042808-38042829 chr19:38042814-38042830
30	CTCF	chr19:38042720-38042870	GM12864	blood:	n/a	chr19:38042813-38042831 chr19:38042815-38042828 chr19:38042815-38042828 chr19:38042808-38042829 chr19:38042814-38042830
31	CTCF	chr19:38042760-38042910	AG04449	skin:	n/a	chr19:38042813-38042831 chr19:38042815-38042828 chr19:38042815-38042828 chr19:38042808-38042829 chr19:38042814-38042830
32	CTCF	chr19:38042760-38042910	HMF	breast:	n/a	chr19:38042813-38042831 chr19:38042815-38042828 chr19:38042815-38042828 chr19:38042808-38042829 chr19:38042814-38042830
33	CTCF	chr19:38042760-38042910	AoAF	blood vessel:	n/a	chr19:38042813-38042831 chr19:38042815-38042828 chr19:38042815-38042828 chr19:38042808-38042829 chr19:38042814-38042830
34	CTCF	chr19:38042752-38042846	H1-hESC	embryonic stem cell:	n/a	chr19:38042813-38042831 chr19:38042815-38042828 chr19:38042815-38042828 chr19:38042808-38042829 chr19:38042814-38042830
35	CTCF	chr19:38042780-38042930	GM06990	blood:	n/a	chr19:38042813-38042831 chr19:38042815-38042828 chr19:38042815-38042828 chr19:38042808-38042829 chr19:38042814-38042830
36	CTCF	chr19:38042760-38042910	HPAF	blood vessel:	n/a	chr19:38042813-38042831 chr19:38042815-38042828 chr19:38042815-38042828 chr19:38042808-38042829 chr19:38042814-38042830
37	CTCF	chr19:38042690-38042920	GM12878	blood:	n/a	chr19:38042813-38042831 chr19:38042815-38042828 chr19:38042815-38042828 chr19:38042808-38042829 chr19:38042814-38042830
38	CTCF	chr19:38042740-38042890	GM12874	blood:	n/a	chr19:38042813-38042831 chr19:38042815-38042828 chr19:38042815-38042828 chr19:38042808-38042829 chr19:38042814-38042830
39	CTCF	chr19:38042557-38042928	K562	blood:	n/a	chr19:38042813-38042831 chr19:38042815-38042828 chr19:38042815-38042828 chr19:38042808-38042829 chr19:38042814-38042830
40	CTCF	chr19:38042740-38042890	AG09309	skin:	n/a	chr19:38042813-38042831 chr19:38042815-38042828 chr19:38042815-38042828 chr19:38042808-38042829 chr19:38042814-38042830
41	CTCF	chr19:38042780-38042930	A549	lung:	n/a	chr19:38042813-38042831 chr19:38042815-38042828 chr19:38042815-38042828 chr19:38042808-38042829 chr19:38042814-38042830
42	CTCF	chr19:38039940-38040090	GM12865	blood:	n/a	n/a
43	CTCF	chr19:38042713-38042942	HUVEC	blood vessel:	n/a	chr19:38042813-38042831 chr19:38042815-38042828 chr19:38042815-38042828 chr19:38042808-38042829 chr19:38042814-38042830
44	CTCF	chr19:38042720-38042870	HRE	kidney:	n/a	chr19:38042813-38042831 chr19:38042815-38042828 chr19:38042815-38042828 chr19:38042808-38042829 chr19:38042814-38042830
45	CTCF	chr19:38042720-38042870	GM12865	blood:	n/a	chr19:38042813-38042831 chr19:38042815-38042828 chr19:38042815-38042828 chr19:38042808-38042829 chr19:38042814-38042830
46	CTCF	chr19:38042540-38042690	GM12866	blood:	n/a	n/a
47	CTCF	chr19:38042720-38042870	GM12867	blood:	n/a	chr19:38042813-38042831 chr19:38042815-38042828 chr19:38042815-38042828 chr19:38042808-38042829 chr19:38042814-38042830
48	CTCF	chr19:38042707-38042941	K562	blood:	n/a	chr19:38042813-38042831 chr19:38042815-38042828 chr19:38042815-38042828 chr19:38042808-38042829 chr19:38042814-38042830
49	CTCF	chr19:38042661-38042975	GM12878	blood:	n/a	chr19:38042813-38042831 chr19:38042815-38042828 chr19:38042815-38042828 chr19:38042808-38042829 chr19:38042814-38042830
50	CTCF	chr19:38042740-38042890	HPF	lung:	n/a	chr19:38042813-38042831 chr19:38042815-38042828 chr19:38042815-38042828 chr19:38042808-38042829 chr19:38042814-38042830

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr19:38042418-38042468	Caco-2	colon:	n/a
2	chr19:38039666-38039716	RPTEC	kidney:	n/a
3	chr19:38042418-38042468	Caco-2	colon:	n/a
4	chr19:38039666-38039716	RPTEC	kidney:	n/a
5	chr19:38039666-38039716	NH-A	brain:	n/a
6	chr19:38042034-38042084	HepG2	liver:	n/a
7	chr19:38029609-38029659	HCT-116	colon:	n/a
8	chr19:38041450-38041500	U87	brain:	n/a
9	chr19:38042034-38042084	HPAEpiC	pulmonary alveolar:	n/a
10	chr19:38040009-38040059	GM19239	blood:	n/a
11	chr19:38042418-38042468	GM06990	blood:	n/a
12	chr19:38042009-38042059	ProgFib	skin:	n/a
13	chr19:38040340-38040390	HRE	kidney:	n/a
14	chr19:38042472-38042522	HCT-116	colon:	n/a
15	chr19:38042418-38042468	AG10803	skin:	n/a
16	chr19:38040340-38040390	GM06990	blood:	n/a
17	chr19:38042034-38042084	K562	blood:	n/a
18	chr19:38042009-38042059	ovcar-3	ovarian:	n/a
19	chr19:38039469-38039519	HCF	heart:	n/a
20	chr19:38042154-38042204	HRPEpiC	eye:	n/a
21	chr19:38039469-38039519	RPTEC	kidney:	n/a
22	chr19:38042418-38042468	HCT-116	colon:	n/a
23	chr19:38042472-38042522	ProgFib	skin:	n/a
24	chr19:38040340-38040390	H1-hESC	embryonic stem cell:	embryo
25	chr19:38040009-38040059	PANC-1	pancreas:	n/a
26	chr19:38042154-38042204	AG09309	skin:	n/a
27	chr19:38042123-38042173	NH-A	brain:	n/a
28	chr19:38039666-38039716	SKMC	muscle:	n/a
29	chr19:38029609-38029659	HAEpiC	amniotic membrane:	n/a
30	chr19:38042109-38042159	NB4	blood:	n/a
31	chr19:38042123-38042173	GM12878	blood:	n/a
32	chr19:38042472-38042522	AoSMC	blood vessel:	n/a
33	chr19:38042154-38042204	LNCaP	prostate:	n/a
34	chr19:38042472-38042522	LNCaP	prostate:	n/a
35	chr19:38039666-38039716	HCM	heart:	n/a
36	chr19:38042009-38042059	HCPEpiC	choroid plexus:	n/a
37	chr19:38042109-38042159	HAEpiC	amniotic membrane:	n/a
38	chr19:38042034-38042084	HRPEpiC	eye:	n/a
39	chr19:38042034-38042084	MCF10A-Er-Src	breast:	n/a
40	chr19:38041450-38041500	SK-N-SH_RA	brain:	n/a
41	chr19:38035880-38035930	HRPEpiC	eye:	n/a
42	chr19:38039469-38039519	GM06990	blood:	n/a
43	chr19:38042009-38042059	MCF10A-Er-Src	breast:	n/a
44	chr19:38042034-38042084	AG09309	skin:	n/a
45	chr19:38042109-38042159	HRPEpiC	eye:	n/a
46	chr19:38042472-38042522	SK-N-MC	brain:	n/a
47	chr19:38039666-38039716	K562	blood:	n/a
48	chr19:38039469-38039519	HEEpiC	esophagus:	n/a
49	chr19:38039469-38039519	HAEpiC	amniotic membrane:	n/a
50	chr19:38041450-38041500	HUVEC	blood vessel:	n/a

No.	Distal block	Cell Line	Cell type
1	chr19:38012056..38014685-chr19:38024985..38026861,2	K562	blood:
2	chr19:38027296..38029618-chr19:38032847..38035572,2	K562	blood:
3	chr19:38027296..38029618-chr19:38032847..38035572,2	K562	blood:
4	chr19:37860446..37862285-chr19:38041060..38043682,2	K562	blood:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-ZNF793-1	chr19:38042274-38042567	ENSG00000267470.1
2	lnc-ZNF793-1	chr19:38040999-38041220	XLOC_013064
3	lnc-ZNF793-1	chr19:38039851-38040057	NR_038247
4	lnc-ZNF793-1	chr19:38042279-38042567	ENSG00000267470.1
5	lnc-ZNF793-1	chr19:38040621-38040876	XLOC_013064
6	lnc-ZNF793-1	chr19:38039869-38040057	ENSG00000267470.1
7	lnc-ZNF793-1	chr19:38039853-38040057	ENSG00000267470.1
8	lnc-ZNF793-1	chr19:38042273-38042567	NONHSAT066138
9	lnc-ZNF793-1	chr19:38042273-38042567	NR_038249
10	lnc-ZNF793-1	chr19:38042314-38042567	ENSG00000267470.1
11	lnc-ZNF793-1	chr19:38041764-38041893	ENSG00000267470.1
12	lnc-ZNF793-1	chr19:38039849-38040057	ENSG00000267470.1
13	lnc-ZNF793-1	chr19:38039816-38040057	ENSG00000267470.1
14	lnc-ZNF793-1	chr19:38042273-38042567	ENSG00000267470.1
15	lnc-ZNF793-1	chr19:38039877-38040057	ENSG00000267470.1
16	lnc-ZNF793-1	chr19:38040435-38040516	ENSG00000267470.1
17	lnc-ZNF793-1	chr19:38039851-38040057	NONHSAT066134
18	lnc-ZNF570-3	chr19:38033110-38034198	NONHSAT066125
19	lnc-ZNF570-3	chr19:38033110-38034198	NONHSAT066126
20	lnc-ZNF793-1	chr19:38039830-38040057	ENSG00000267470.1
21	lnc-ZNF793-1	chr19:38039797-38040057	XLOC_013064
22	lnc-ZNF793-1	chr19:38041764-38041893	NONHSAT066134

Variant related genes	Relation type
ZNF571-AS1	TF binding region
ZNF540	TF binding region
ENSG00000180458	TF binding region
ZNF571-AS1	CpG island
ZNF540	CpG island
ENSG00000180458	CpG island
ENSG00000189164	chromatin interactions
ENSG00000188227	chromatin interactions

Extended variants
information (count: 693 )
Associated
traits (count: 63 )

Variant overlapped rSNPs/rCNVs (count:693 , 50 per page) page: 1 2 3 4 5 6 7 ... 14

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs146916662	chr19:38025400-38025401	ZNF genes & repeats Strong transcription Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
2	rs531511849	chr19:38025402-38025403	ZNF genes & repeats Strong transcription Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
3	rs565521376	chr19:38025418-38025419	ZNF genes & repeats Strong transcription Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
4	rs201255994	chr19:38025420-38025421	ZNF genes & repeats Strong transcription Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
5	rs557754749	chr19:38025468-38025469	ZNF genes & repeats Strong transcription Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
6	rs377232249	chr19:38025582-38025583	ZNF genes & repeats Strong transcription Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
7	rs548180823	chr19:38025612-38025613	ZNF genes & repeats Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
8	rs143133863	chr19:38025753-38025754	ZNF genes & repeats Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
9	rs184325780	chr19:38025790-38025791	ZNF genes & repeats Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
10	rs188765695	chr19:38025792-38025793	ZNF genes & repeats Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
11	rs551916593	chr19:38025833-38025834	ZNF genes & repeats Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
12	rs367602846	chr19:38025907-38025908	ZNF genes & repeats Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
13	rs570643439	chr19:38025923-38025924	ZNF genes & repeats Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
14	rs181909689	chr19:38025928-38025929	ZNF genes & repeats Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
15	rs146699437	chr19:38026033-38026034	ZNF genes & repeats Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
16	rs371227241	chr19:38026043-38026044	ZNF genes & repeats Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
17	rs574730540	chr19:38026084-38026085	ZNF genes & repeats Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
18	rs535802323	chr19:38026085-38026086	ZNF genes & repeats Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
19	rs200734821	chr19:38026091-38026092	ZNF genes & repeats Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
20	rs557691572	chr19:38026120-38026121	ZNF genes & repeats Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
21	rs575980648	chr19:38026186-38026187	ZNF genes & repeats Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
22	rs577697454	chr19:38026202-38026203	ZNF genes & repeats Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
23	rs111838328	chr19:38026334-38026335	ZNF genes & repeats Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
24	rs187057488	chr19:38026356-38026357	ZNF genes & repeats Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
25	rs564656552	chr19:38026381-38026382	ZNF genes & repeats Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
26	rs576902491	chr19:38026395-38026396	ZNF genes & repeats Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
27	rs202108985	chr19:38026423-38026424	ZNF genes & repeats Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
28	rs201155084	chr19:38026424-38026425	ZNF genes & repeats Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
29	rs189553374	chr19:38026432-38026433	ZNF genes & repeats Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
30	rs559343415	chr19:38026444-38026445	ZNF genes & repeats Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
31	rs529658533	chr19:38026466-38026467	ZNF genes & repeats Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
32	rs548137942	chr19:38026474-38026475	ZNF genes & repeats Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
33	rs563255362	chr19:38026475-38026476	ZNF genes & repeats Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
34	rs370736062	chr19:38026529-38026530	ZNF genes & repeats Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
35	rs551980210	chr19:38026583-38026584	ZNF genes & repeats Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
36	rs534526450	chr19:38026705-38026706	ZNF genes & repeats Strong transcription Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
37	rs570309462	chr19:38026707-38026708	ZNF genes & repeats Strong transcription Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
38	rs535160030	chr19:38026715-38026716	ZNF genes & repeats Strong transcription Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
39	rs200233561	chr19:38026717-38026718	ZNF genes & repeats Strong transcription Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
40	rs546787761	chr19:38026719-38026720	ZNF genes & repeats Strong transcription Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
41	rs568494826	chr19:38026794-38026795	ZNF genes & repeats Strong transcription Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
42	rs563660127	chr19:38026795-38026796	ZNF genes & repeats Strong transcription Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
43	rs148858600	chr19:38026807-38026808	ZNF genes & repeats Strong transcription Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
44	rs557359419	chr19:38026808-38026809	ZNF genes & repeats Strong transcription Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
45	rs558927002	chr19:38026858-38026859	ZNF genes & repeats Strong transcription Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
46	rs576042229	chr19:38026868-38026869	ZNF genes & repeats Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs540118251	chr19:38026991-38026992	ZNF genes & repeats Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs74686710	chr19:38027017-38027018	ZNF genes & repeats Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs143485481	chr19:38027020-38027021	ZNF genes & repeats Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs116628248	chr19:38027032-38027033	ZNF genes & repeats Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:63)

Disease	PMID	Source
Myelodysplastic syndrome	17634407	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Cancer	21637783	CNVD
Retinoblastoma	21504564	CNVD
Medulloblastoma	21979893	CNVD
Ovarian cancer	21720365	CNVD
Cancer	20164919	CNVD
Thoracic aortic aneurysm	21092924	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Prostate cancer	18632612	CNVD
Autism	22495311	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Ductal carcinoma	22052326	CNVD
Pleomorphic liposarcoma	18784837	CNVD
Congenital nephrotic syndrome	18421352	CNVD
Astrocytoma	17934521	CNVD
Leukemia	17361228	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Breast cancer	21858162	CNVD
Breast cancer	17603634	CNVD
Glioma	21971842	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Endometrial cancer	22040021	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Oligodendroglial tumors	17285580	CNVD
renal disease	20603712	CNVD
Salivary gland adenoid cystic carcinoma	17545515	CNVD
Disorders of sex development	21048976	CNVD
Ovarian cancer	22174824	CNVD
Breast cancer	16608533	CNVD
Neuroblastoma	18923191	CNVD
Breast cancer	21364760	CNVD
Invasive pancreatic ductal carcinoma	18765526	CNVD
Rhabdomyosarcoma	16790082	CNVD
Chordoma	18071362	CNVD
Urothelial carcinoma	21177765	CNVD
small cell lung cancer	20016488	CNVD
Lung cancer	18438408	CNVD
Glioma	17123091	CNVD
Basal cell lymphoma	19029149	CNVD
Diffuse large b-cell lymphoma	19029149	CNVD
Multiple myeloma	16616336	CNVD
Wilms tumour	21544195	CNVD
Mental retardation	19951919	CNVD
19q13.11 deletion syndrome	22378287	CNVD
Myelofibrosis	22110671	CNVD
Breast cancer	21045282	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Ovarian neoplasms	16753589	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Metanephric adenoma	20802469	CNVD
Acute myeloid leukemia	16864856	CNVD
Lung cancer	21569311	CNVD
Bladder cancer	21909424	CNVD
Cystinuria	21255007	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD

Chromatin state (count:355 , 50 per page) page: 1 2 3 4 5 6 7 8

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:37999000-38028800	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--
2	chr19:38002000-38028800	ZNF genes & repeats	Breast Myoepithelial Primary Cells	Breast
3	chr19:38008800-38026600	Weak transcription	Fetal Heart	heart
4	chr19:38017400-38028800	ZNF genes & repeats	Adipose Nuclei	Adipose
5	chr19:38021600-38028800	ZNF genes & repeats	Primary T cells from cord blood	blood
6	chr19:38021600-38030200	ZNF genes & repeats	HUES64 Cell Line	embryonic stem cell
7	chr19:38021800-38028800	ZNF genes & repeats	HUES6 Cell Line	embryonic stem cell
8	chr19:38021800-38028800	ZNF genes & repeats	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
9	chr19:38021800-38028800	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Female	--
10	chr19:38021800-38028800	ZNF genes & repeats	Foreskin Keratinocyte Primary Cells skin03	Skin
11	chr19:38021800-38028800	ZNF genes & repeats	Duodenum Mucosa	Duodenum
12	chr19:38021800-38029800	Strong transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
13	chr19:38021800-38030000	ZNF genes & repeats	H9 Derived Neuron Cultured Cells	ES cell derived
14	chr19:38021800-38030800	ZNF genes & repeats	Primary T helper cells PMA-I stimulated	--
15	chr19:38021800-38031600	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
16	chr19:38022000-38028400	ZNF genes & repeats	Primary Natural Killer cells fromperipheralblood	blood
17	chr19:38022000-38028800	ZNF genes & repeats	Sigmoid Colon	Sigmoid Colon
18	chr19:38022000-38030600	ZNF genes & repeats	iPS-18 Cell Line	embryonic stem cell
19	chr19:38022200-38025600	Strong transcription	Fetal Muscle Leg	muscle
20	chr19:38022200-38025800	ZNF genes & repeats	Pancreas	Pancrea
21	chr19:38022200-38026000	ZNF genes & repeats	Rectal Smooth Muscle	rectum
22	chr19:38022200-38027200	Strong transcription	Right Ventricle	heart
23	chr19:38022200-38028600	ZNF genes & repeats	Primary B cells from cord blood	blood
24	chr19:38022200-38028600	ZNF genes & repeats	Primary T helper cells fromperipheralblood	blood
25	chr19:38022200-38028600	ZNF genes & repeats	Fetal Stomach	stomach
26	chr19:38022200-38028800	ZNF genes & repeats	Brain Inferior Temporal Lobe	brain
27	chr19:38022200-38028800	ZNF genes & repeats	Esophagus	oesophagus
28	chr19:38022200-38028800	ZNF genes & repeats	Fetal Intestine Small	intestine
29	chr19:38022200-38028800	ZNF genes & repeats	Left Ventricle	heart
30	chr19:38022200-38028800	ZNF genes & repeats	Spleen	Spleen
31	chr19:38022200-38029400	ZNF genes & repeats	Aorta	Aorta
32	chr19:38022200-38029600	ZNF genes & repeats	Ovary	ovary
33	chr19:38022200-38030200	ZNF genes & repeats	Ganglion Eminence derived primary cultured neurospheres	brain
34	chr19:38022200-38037000	ZNF genes & repeats	Duodenum Smooth Muscle	Duodenum
35	chr19:38022400-38025400	ZNF genes & repeats	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
36	chr19:38022400-38025800	ZNF genes & repeats	Foreskin Fibroblast Primary Cells skin01	Skin
37	chr19:38022400-38026000	ZNF genes & repeats	Primary T helper 17 cells PMA-I stimulated	--
38	chr19:38022400-38026000	Strong transcription	Brain Germinal Matrix	brain
39	chr19:38022400-38026000	ZNF genes & repeats	Brain Dorsolateral Prefrontal Cortex	brain
40	chr19:38022400-38026000	ZNF genes & repeats	Pancreatic Islets	Pancreatic Islet
41	chr19:38022400-38026000	ZNF genes & repeats	Gastric	stomach
42	chr19:38022400-38026600	Strong transcription	Fetal Muscle Trunk	muscle
43	chr19:38022400-38027400	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
44	chr19:38022400-38028000	ZNF genes & repeats	Primary mononuclear cells fromperipheralblood	Blood
45	chr19:38022400-38028600	ZNF genes & repeats	Primary B cells from peripheral blood	blood
46	chr19:38022400-38028600	ZNF genes & repeats	Lung	lung
47	chr19:38022400-38028800	ZNF genes & repeats	H1 Derived Mesenchymal Stem Cells	ES cell derived
48	chr19:38022400-38028800	ZNF genes & repeats	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
49	chr19:38022400-38028800	ZNF genes & repeats	HUES48 Cell Line	embryonic stem cell
50	chr19:38022400-38028800	ZNF genes & repeats	Primary hematopoietic stem cells short term culture	blood

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