Variant report

Variant nsv2599
Chromosome Location chr1:119935023-119967748
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:48 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:119932600-119937000 Enhancers Fetal Intestine Small intestine
2 chr1:119933000-119935400 Weak transcription Rectal Mucosa Donor 31 rectum
3 chr1:119933200-119937000 Genic enhancers Liver Liver
4 chr1:119934000-119937600 Weak transcription Sigmoid Colon Sigmoid Colon
5 chr1:119935000-119936000 Weak transcription Fetal Intestine Large intestine
6 chr1:119935400-119937600 Enhancers Rectal Mucosa Donor 31 rectum
7 chr1:119936000-119936400 Enhancers Rectal Mucosa Donor 29 rectum
8 chr1:119936000-119940800 Enhancers Fetal Intestine Large intestine
9 chr1:119936200-119937800 Enhancers HepG2 liver
10 chr1:119936400-119937000 Active TSS Rectal Mucosa Donor 29 rectum
11 chr1:119937000-119937400 Weak transcription Fetal Intestine Small intestine
12 chr1:119937000-119937600 Enhancers Rectal Mucosa Donor 29 rectum
13 chr1:119937000-119945800 Weak transcription Liver Liver
14 chr1:119937400-119938000 Enhancers Fetal Intestine Small intestine
15 chr1:119937600-119937800 Enhancers Sigmoid Colon Sigmoid Colon
16 chr1:119937800-119938200 Weak transcription Sigmoid Colon Sigmoid Colon
17 chr1:119937800-119946400 Weak transcription HepG2 liver
18 chr1:119938000-119939000 Weak transcription Fetal Intestine Small intestine
19 chr1:119938200-119938600 Enhancers Sigmoid Colon Sigmoid Colon
20 chr1:119939000-119941600 Enhancers Fetal Intestine Small intestine
21 chr1:119939400-119940600 Enhancers Fetal Adrenal Gland Adrenal Gland
22 chr1:119940800-119941400 Weak transcription Fetal Intestine Large intestine
23 chr1:119941400-119941600 Enhancers Fetal Intestine Large intestine
24 chr1:119946400-119946800 Enhancers HepG2 liver
25 chr1:119946400-119948200 ZNF genes & repeats Liver Liver
26 chr1:119947000-119948000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr1:119947600-119947800 Bivalent Enhancer Foreskin Keratinocyte Primary Cells skin02 Skin
28 chr1:119948000-119950200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr1:119952000-119952400 Enhancers Breast Myoepithelial Primary Cells Breast
30 chr1:119952200-119953600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
31 chr1:119952200-119953800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr1:119953000-119954400 Enhancers Fetal Intestine Large intestine
33 chr1:119953400-119954200 Enhancers Fetal Intestine Small intestine
34 chr1:119953800-119954200 Enhancers Fetal Adrenal Gland Adrenal Gland
35 chr1:119954400-119955600 Weak transcription Fetal Intestine Large intestine
36 chr1:119955600-119956000 Enhancers Fetal Intestine Large intestine
37 chr1:119956000-119962200 Weak transcription Fetal Intestine Large intestine
38 chr1:119957200-119958000 Enhancers Fetal Adrenal Gland Adrenal Gland
39 chr1:119957400-119958200 Enhancers Pancreas Pancrea
40 chr1:119958200-119959800 Enhancers Liver Liver
41 chr1:119959800-119961400 Weak transcription Liver Liver
42 chr1:119961400-119963600 Enhancers Liver Liver
43 chr1:119962200-119963800 Enhancers Fetal Intestine Large intestine
44 chr1:119965800-119966200 Enhancers HUES48 Cell Line embryonic stem cell
45 chr1:119966000-119966400 Enhancers iPS-18 Cell Line embryonic stem cell
46 chr1:119966000-119966800 Enhancers iPS-20b Cell Line embryonic stem cell
47 chr1:119966000-119967200 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
48 chr1:119967200-119970000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived

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